RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 P01759 136 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Ly6c1P0CW02 131 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Cr2P19070 1025 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Cd3eP22646 189 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Gtf2h5Q8K2X8 71 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Q9CQ90 155 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 LbhQ9CX60 105 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Q9D727 114 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Ly96Q9JHF9 160 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Ammecr1Q9JHT5 344 aaKnown RBP11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Cfap46E9Q2C0 2641 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Zfp950A0A0U1RQ46 609 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Mfge8P21956 463 aaKnown RBP11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Loxl2P58022 776 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Dhrs13Q5SS80 376 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Fam110aQ8R184 296 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Ppp1r14aQ91VC7 147 aa11.89□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Tmem29A2ANF5 204 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Olfr177E9Q7W1 309 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Fam240bJ3QMB3 78 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Loxl1P97873 607 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Wfdc21Q8BTE6 63 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Habp2Q8K0D2 558 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 1700001C19RikQ8K168 210 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Card19Q9D1I2 183 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Them7Q9DCP4 223 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 MgaA2AWL7 3003 aaKnown RBP11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Igkv1-133A0A0B4J1H8 120 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Gm6034E9Q101 117 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Vmn1r197Q8R265 298 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Borcs7Q9CRC6 105 aa11.88□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Gm45521A0A1B0GRK0 198 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 A0A1L1SR50 188 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Gm6871L7N248 545 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Igfbpl1Q80W15 270 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 PgpQ8CHP8 321 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Prr23a3Q9CWP9 254 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Tnfaip6O08859 275 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Cd59bP58019 129 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Nhlh1Q02576 133 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Ang6Q5GAN0 147 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Fam222bQ6P539 562 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Tmem204Q7TQI0 226 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Olfr975Q8VG91 310 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Olfr1272Q8VGN8 308 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 PpdpfQ9CR37 115 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Hyls1Q9CXX0 307 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 PerpQ9JK95 193 aa11.87□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Plcxd2B2RXA1 340 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 BC107364E9Q5A2 140 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Colca2F8VPY8 239 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Gata3P23772 443 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 G430049J08RikQ3TL09 166 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Gm7489Q3UT34 171 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Rnf7Q9WTZ1 113 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 9830107B12RikD3Z5D6 160 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Gm5093E9PZB3 174 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Defa9P50707 93 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Q08AU9 97 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Olfr761Q7TRJ0 323 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Olfr1454Q8VFW2 307 aa11.86□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Cacna1iE9Q7P2 2199 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Trav14d-1A0A075B6B1 121 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Gm15056F6ZR08 88 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Ca1P13634 261 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Rpl27aP14115 148 aaKnown RBP11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Cox8bP48772 70 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Folr2Q05685 251 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Fxyd3Q61835 88 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Olfr745Q7TRL9 328 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Olfr1337A2ACY8 315 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Gm6096D3YTY6 151 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Slc25a17O70579 307 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Cdkn1bP46414 197 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Ifi27Q8C6G0 260 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Osr1Q9WVG7 266 aa11.85□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Gm12057A0A087WR21 115 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Smim13E9Q942 88 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 CrxO54751 299 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Mtatp8P03930 67 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 P04946 108 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 NpsP0C0P8 89 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Ighv3-6P18531 116 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Gm12689Q8BQU9 117 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Ss18l1Q8BW22 402 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Scnm1Q8K136 229 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Slc16a4Q8R0M8 500 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Olfr1462Q8VFW3 307 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Tm4sf20Q9CQY8 226 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Slc25a15Q9WVD5 301 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 AspmQ8CJ27 3122 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Igsf23B2RTN2 239 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 BC030500E9Q6W0 185 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Oosp2Q4FZG8 168 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Olfr411Q7TRW8 315 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Slc17a9Q8VCL5 447 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Nat6Q9R123 314 aa11.84□□□□□ -0.51
Ushbp1-201ENSMUST00000049184 Bod1lE9Q6J5 3032 aa11.83□□□□□ -0.52
Ushbp1-201ENSMUST00000049184 Col9a1Q05722 921 aa11.83□□□□□ -0.52
Ushbp1-201ENSMUST00000049184 Slamf7Q8BHK6 333 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 63.7 ms