RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Cysltr1Q99JA4 352 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tmem29A2ANF5 204 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Ly6g6fB2RXM6 300 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Mpv17P19258 176 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Gm10604Q3V0X7 143 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 CfdP03953 259 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 C1ql4Q4ZJM9 238 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 GgnQ80WJ1 673 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Mrpl51Q9CPY1 128 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Gm14548E9Q1Z6 680 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Nhlrc4Q3UP44 136 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Cela3bQ9CQ52 269 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Plxna3P70208 1872 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Il9P15247 144 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Gm12355A2A4X6 163 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Srsf3P84104 164 aaKnown RBP11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Zfp72Q0VFY0 435 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tdgf1P51865 171 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Olfr1195Q8VG21 308 aa11.7□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Igkv4-81A0A0G2JEY5 119 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 E430018J23RikE9PZQ8 461 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 D430019H16RikJ3QPM6 83 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Mcrip2Q9CQB2 160 aaKnown RBP11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 9330161L09RikQ9D253 136 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tex48Q9DA81 110 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Igkv4-50A0A0B4J1J0 117 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 B230307C23RikQ8BLB2 64 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Saxo2Q8BQB6 394 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Lhx2Q9Z0S2 406 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 5730522E02RikQ5SP45 163 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 9430097D07RikQ8BS47 195 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Ube2cQ9D1C1 179 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Sod1P08228 154 aaKnown RBP11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Spink6Q8BT20 105 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Parm1Q923D3 296 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Ighv5-4A0A075B5P9 117 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Trav21-dv12A0A075B6C4 109 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 OdamA1E960 273 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Ccl17F6R5P4 103 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Sigmar1O55242 223 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Cryba2Q9JJV1 197 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tanc1Q0VGY8 1856 aa11.69□□□□□ -0.54
Col5a1-201ENSMUST00000028280 St6galnac3Q9WUV2 305 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 LctF8VPT3 1931 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Gata2O09100 480 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Il2raP01590 268 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Dpm2Q9Z324 84 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Igkv4-57-1A0A075B5M4 119 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Atp5g2P56383 146 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 AtraidQ6PGD0 223 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Nabp1Q8BGW5 198 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Ube2wQ8VDW4 151 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Ms4a12A0A087WSB9 263 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Gm16381A0A1Y7VKT9 73 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Cpsf4lE9Q2N0 280 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Cldn23Q9D7D7 296 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Igkv6-14A0A140T8P1 115 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Gm10521E9PZK0 135 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Fgf11P70378 225 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Cox7a2lQ61387 111 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Gm21616B6ZB74 166 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Scrt1Q99M85 348 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Zfp646Q6NV66 1788 aa11.68□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Thy1P01831 162 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 ChodlQ9CXM0 273 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 PerpQ9JK95 193 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Bcl6bO88282 474 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 RhogP84096 191 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Klk1b27Q9JM71 263 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Anapc10Q8K2H6 185 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Higd1bQ99JY6 98 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Clec5aQ9R007 190 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Trav19A0A0B4J1K4 119 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tcrg-V5A0A0G2JGV5 113 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Q8BG31 207 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Cxcl10P17515 98 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Samd5Q3V1H9 173 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tmem86bQ497J1 226 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Prss41Q920S2 322 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Hs3st3b1Q9QZS6 390 aa11.67□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Klk1b22P15948 259 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Lgals4Q8K419 326 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Igkv4-68A0A0B4J1I7 117 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Vgll4Q80V24 287 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Trav14d-3-dv8A0A075B619 120 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tmem158Q6F5E0 286 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Bdp1Q571C7 2467 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 P01675 107 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 P01676 107 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 P01677 107 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 P01678 107 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Plxnb3Q9QY40 1902 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tmem8bB1AWJ5 472 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Gm42957D6RFQ2 366 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Gm6871L7N248 545 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Repin1Q5U4E2 545 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 AgaQ64191 346 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Hist2h2beQ64524 126 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 OtorQ9JIE3 128 aa11.66□□□□□ -0.54
Col5a1-201ENSMUST00000028280 Tomm40Q9QYA2 361 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms