RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr1436A0PK57 315 aa13.15□□□□□ -0.3
Shh-201ENSMUST00000002708 Gm9949Q8C9F4 104 aa13.15□□□□□ -0.3
Shh-201ENSMUST00000002708 Ssbp1Q9CYR0 152 aaKnown RBP13.15□□□□□ -0.3
Shh-201ENSMUST00000002708 Nav2E9Q842 2432 aa13.15□□□□□ -0.3
Shh-201ENSMUST00000002708 Igkv14-130A0A0G2JF45 117 aa13.14□□□□□ -0.31
Shh-201ENSMUST00000002708 Cd3eP22646 189 aa13.14□□□□□ -0.31
Shh-201ENSMUST00000002708 AsipQ03288 131 aa13.14□□□□□ -0.31
Shh-201ENSMUST00000002708 Isg15Q64339 161 aaKnown RBP13.14□□□□□ -0.31
Shh-201ENSMUST00000002708 Olfr303Q8VFP0 319 aa13.14□□□□□ -0.31
Shh-201ENSMUST00000002708 Zfp114B2RRA8 586 aa13.14□□□□□ -0.31
Shh-201ENSMUST00000002708 Loxl2P58022 776 aa13.14□□□□□ -0.31
Shh-201ENSMUST00000002708 Eda2rQ8BX35 297 aa13.14□□□□□ -0.31
Shh-201ENSMUST00000002708 Med12A2AGH6 2190 aa13.14□□□□□ -0.31
Shh-201ENSMUST00000002708 Phxr2P15972 65 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Ube2g1P62254 170 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Pex7P97865 318 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Cd33Q63994 403 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Q9D7E4 109 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Rnase4Q9JJH1 148 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Pf4Q9Z126 105 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Trav14n-3A0A075B645 120 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Olfr869E9PX82 323 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Ca2P00920 260 aaKnown RBP13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 CebpdQ00322 268 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Gng7Q61016 68 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Ociad1Q9CRD0 247 aaKnown RBP13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 HeylQ9DBX7 326 aa13.13□□□□□ -0.31
Shh-201ENSMUST00000002708 Trav12-3A0A075B648 115 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Olfr748E9Q9Z0 307 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 P01736 120 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Tac3P55099 116 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Plscr4P58196 326 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Tnfsf18Q7TS55 173 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Zg16Q8K0C5 167 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Rnase2aQ8K196 155 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Olfr954Q9EQB6 314 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Ifna14Q810G3 189 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Trbv26A0A0B4J1P5 115 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Klf12O35738 402 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Crip1P63254 77 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Dlx6P70397 175 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 SelplgQ62170 397 aa13.12□□□□□ -0.31
Shh-201ENSMUST00000002708 Zfp950A0A0U1RQ46 609 aa13.11□□□□□ -0.31
Shh-201ENSMUST00000002708 Cd209gD3Z5D4 194 aa13.11□□□□□ -0.31
Shh-201ENSMUST00000002708 Gm10192Q3V0S1 108 aa13.11□□□□□ -0.31
Shh-201ENSMUST00000002708 Lrfn3Q8BLY3 626 aa13.11□□□□□ -0.31
Shh-201ENSMUST00000002708 Olfr877Q8VF62 311 aa13.11□□□□□ -0.31
Shh-201ENSMUST00000002708 ChodlQ9CXM0 273 aa13.11□□□□□ -0.31
Shh-201ENSMUST00000002708 Trav3n-3A0A0G2JEM0 114 aa13.11□□□□□ -0.31
Shh-201ENSMUST00000002708 Slc17a9Q8VCL5 447 aa13.11□□□□□ -0.31
Shh-201ENSMUST00000002708 Psmb2Q9R1P3 201 aa13.11□□□□□ -0.31
Shh-201ENSMUST00000002708 Sec16aA2AIX1 2377 aa13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 eef1akmt3D3YWP0 232 aa13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 1700003H04RikE9PXM2 192 aa13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 Cldn1O88551 211 aa13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 Neil2Q6R2P8 329 aa13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 Rbms1Q91W59 403 aaKnown RBP13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 Vmn1r1E9PVR6 306 aa13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 Nxph4G3X9N5 304 aa13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 AY761185Q5ERI8 94 aa13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 Olfr1402Q8VET1 320 aa13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 Tmprss5Q9ER04 455 aa13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 Mixl1Q9WUI0 231 aa13.1□□□□□ -0.31
Shh-201ENSMUST00000002708 Olfr1434Q7TQR9 312 aa13.09□□□□□ -0.31
Shh-201ENSMUST00000002708 Gm12689Q8BQU9 117 aa13.09□□□□□ -0.31
Shh-201ENSMUST00000002708 C1qtnf5Q8K479 243 aa13.09□□□□□ -0.31
Shh-201ENSMUST00000002708 Lypd8Q9D7S0 255 aa13.09□□□□□ -0.31
Shh-201ENSMUST00000002708 Svep1A2AVA0 3567 aa13.09□□□□□ -0.31
Shh-201ENSMUST00000002708 Pmis2Q497Q9 96 aa13.09□□□□□ -0.31
Shh-201ENSMUST00000002708 Trappc2lQ9JME7 139 aa13.09□□□□□ -0.31
Shh-201ENSMUST00000002708 Pilrb2Q2YFS1 225 aa13.08□□□□□ -0.31
Shh-201ENSMUST00000002708 Olfr958Q8VEY3 312 aa13.08□□□□□ -0.31
Shh-201ENSMUST00000002708 Gm28778A0A087WSK7 233 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Cox7a2P48771 83 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Gatad1Q920S3 266 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Tmed6Q9CQG0 239 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Mrpl32Q9DCI9 187 aaKnown RBP13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Zfp119aQ9JIC0 545 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 TroQ6DIC6 2087 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Ighv8-6A0A0A6YXA3 118 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Olfr364-ps1A0A140T8Q2 307 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Gm6970F7DCP6 221 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Spem1Q5F289 310 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Olfr823Q7TRH2 315 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Tmem140Q8BGY5 185 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Arl6ip6Q8BH07 226 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Zc2hc1aQ8BJH1 324 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Ubald2Q8BQH4 164 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Olfr824Q8VFU4 315 aa13.08□□□□□ -0.32
Shh-201ENSMUST00000002708 Clec4b2Q67DU8 208 aa13.07□□□□□ -0.32
Shh-201ENSMUST00000002708 Wisp2Q9Z0G4 251 aa13.07□□□□□ -0.32
Shh-201ENSMUST00000002708 Adgrg4B7ZCC9 3073 aa13.07□□□□□ -0.32
Shh-201ENSMUST00000002708 Sptbn2Q68FG2 2388 aa13.07□□□□□ -0.32
Shh-201ENSMUST00000002708 Nat8f4G5E8L3 226 aa13.07□□□□□ -0.32
Shh-201ENSMUST00000002708 Wipf1Q8K1I7 493 aa13.07□□□□□ -0.32
Shh-201ENSMUST00000002708 Olfr477Q8VGI6 310 aa13.07□□□□□ -0.32
Shh-201ENSMUST00000002708 Platr25A0A1Y7VIZ1 466 aa13.06□□□□□ -0.32
Shh-201ENSMUST00000002708 Ighv7-3A0A075B5R2 120 aa13.06□□□□□ -0.32
Shh-201ENSMUST00000002708 Zfp109A0A0U1RPC5 652 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 97.7 ms