RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 TRAV26-1A0A087WT03 109 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 A0A096LPF7 62 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.21□□□□□ -1.42
PHGDH-219ENST00000641513 A0A0J9YWU9 116 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 TIRAPP58753 221 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 KPRPQ5T749 579 aaPredicted RBP6.21□□□□□ -1.42
PHGDH-219ENST00000641513 CEMP1Q6PRD7 247 aaPredicted RBP6.21□□□□□ -1.42
PHGDH-219ENST00000641513 C10orf126Q8N4M7 172 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 FAM104AQ969W3 186 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 NAA38Q9BRA0 125 aaKnown RBP6.21□□□□□ -1.42
PHGDH-219ENST00000641513 VPS25Q9BRG1 176 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 TMEM243Q9BU79 118 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 SPANXDQ9BXN6 97 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 PGPEP1Q9NXJ5 209 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 SPANXCQ9NY87 97 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 PRO0461Q9UI25 63 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 NBEAL2Q6ZNJ1 2754 aa6.21□□□□□ -1.42
PHGDH-219ENST00000641513 IGHV1-58A0A0C4DH39 117 aa6.2□□□□□ -1.42
PHGDH-219ENST00000641513 A0A0J9YXY3 114 aa6.2□□□□□ -1.42
PHGDH-219ENST00000641513 RNASE13Q5GAN3 156 aaKnown RBP6.2□□□□□ -1.42
PHGDH-219ENST00000641513 NTM-AS1Q6ZSK4 140 aa6.2□□□□□ -1.42
PHGDH-219ENST00000641513 LINC01600Q96MT4 127 aa6.2□□□□□ -1.42
PHGDH-219ENST00000641513 GTSF1LQ9H1H1 148 aa6.2□□□□□ -1.42
PHGDH-219ENST00000641513 C11orf68Q9H3H3 251 aaKnown RBP6.2□□□□□ -1.42
PHGDH-219ENST00000641513 A0A0J9YXV3 536 aa6.19□□□□□ -1.42
PHGDH-219ENST00000641513 H3BMG7 143 aa6.19□□□□□ -1.42
PHGDH-219ENST00000641513 H7C423 109 aa6.19□□□□□ -1.42
PHGDH-219ENST00000641513 TSPAN13O95857 204 aa6.19□□□□□ -1.42
PHGDH-219ENST00000641513 PCP4P48539 62 aa6.19□□□□□ -1.42
PHGDH-219ENST00000641513 GAGE6Q13070 117 aa6.19□□□□□ -1.42
PHGDH-219ENST00000641513 TMEM101Q96IK0 257 aa6.19□□□□□ -1.42
PHGDH-219ENST00000641513 CHCHD5Q9BSY4 110 aa6.19□□□□□ -1.42
PHGDH-219ENST00000641513 PRO1854Q9UHT4 67 aa6.19□□□□□ -1.42
PHGDH-219ENST00000641513 CFC1BP0CG36 223 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 CFC1P0CG37 223 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 LINC00694P0DN24 101 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 IGHV3-30-3P0DP02 117 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 IFITM1P13164 125 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 NANOS2P60321 138 aaKnown RBP6.18□□□□□ -1.42
PHGDH-219ENST00000641513 RNF151Q2KHN1 245 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 ZFAND6Q6FIF0 208 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 Q6ZUT4 128 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 C11orf45Q8TAV5 145 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 VSIG2Q96IQ7 327 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 TM2D3Q9BRN9 247 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 ICOSQ9Y6W8 199 aa6.18□□□□□ -1.42
PHGDH-219ENST00000641513 TRBV6-8A0A0A6YYG3 113 aa6.17□□□□□ -1.42
PHGDH-219ENST00000641513 TMEM262E9PQX1 116 aa6.17□□□□□ -1.42
PHGDH-219ENST00000641513 HERVK_113P63121 156 aa6.17□□□□□ -1.42
PHGDH-219ENST00000641513 MRPL23Q16540 153 aaKnown RBP6.17□□□□□ -1.42
PHGDH-219ENST00000641513 Q6ZTC4 211 aa6.17□□□□□ -1.42
PHGDH-219ENST00000641513 COPS9Q8WXC6 57 aa6.17□□□□□ -1.42
PHGDH-219ENST00000641513 IGLV5-39A0A0G2JS06 123 aa6.16□□□□□ -1.42
PHGDH-219ENST00000641513 NDUFA1O15239 70 aa6.16□□□□□ -1.42
PHGDH-219ENST00000641513 IGHV3-33P01772 117 aa6.16□□□□□ -1.42
PHGDH-219ENST00000641513 SCGB1A1P11684 91 aa6.16□□□□□ -1.42
PHGDH-219ENST00000641513 MIAQ16674 131 aa6.16□□□□□ -1.42
PHGDH-219ENST00000641513 LITAFQ99732 161 aa6.16□□□□□ -1.42
PHGDH-219ENST00000641513 GEMIN7Q9H840 131 aaKnown RBP6.16□□□□□ -1.42
PHGDH-219ENST00000641513 DNAH3Q8TD57 4116 aa6.15□□□□□ -1.42
PHGDH-219ENST00000641513 ANK2Q01484 3957 aa6.15□□□□□ -1.42
PHGDH-219ENST00000641513 DEFB131BA0A096LNP1 70 aa6.15□□□□□ -1.42
PHGDH-219ENST00000641513 IGKV3OR2-268A0A0C4DH90 116 aa6.15□□□□□ -1.42
PHGDH-219ENST00000641513 SH2D6Q7Z4S9 175 aa6.15□□□□□ -1.42
PHGDH-219ENST00000641513 NDUFA12Q9UI09 145 aa6.15□□□□□ -1.42
PHGDH-219ENST00000641513 TRBV30A0A0K0K1B3 111 aa6.14□□□□□ -1.43
PHGDH-219ENST00000641513 A4D1N5 150 aa6.14□□□□□ -1.43
PHGDH-219ENST00000641513 APOMO95445 188 aa6.14□□□□□ -1.43
PHGDH-219ENST00000641513 WFDC2Q14508 124 aa6.14□□□□□ -1.43
PHGDH-219ENST00000641513 ERG28Q9UKR5 140 aa6.14□□□□□ -1.43
PHGDH-219ENST00000641513 TRAV13-1A0A0B4J241 112 aa6.13□□□□□ -1.43
PHGDH-219ENST00000641513 TEN1Q86WV5 123 aa6.13□□□□□ -1.43
PHGDH-219ENST00000641513 CDC42SE2Q9NRR3 84 aa6.13□□□□□ -1.43
PHGDH-219ENST00000641513 IGLV4-60A0A075B6I1 120 aa6.12□□□□□ -1.43
PHGDH-219ENST00000641513 IGHV3-64A0A075B6Q5 118 aa6.12□□□□□ -1.43
PHGDH-219ENST00000641513 TRAV10A0A0B4J240 114 aa6.12□□□□□ -1.43
PHGDH-219ENST00000641513 LOC107984156A0A0G2JMH3 177 aa6.12□□□□□ -1.43
PHGDH-219ENST00000641513 NOTCH1P46531 2555 aa6.12□□□□□ -1.43
PHGDH-219ENST00000641513 HERV-K104P63124 156 aa6.12□□□□□ -1.43
PHGDH-219ENST00000641513 CIRBPQ14011 172 aaKnown RBP6.12□□□□□ -1.43
PHGDH-219ENST00000641513 ETDBQ3ZM63 59 aa6.12□□□□□ -1.43
PHGDH-219ENST00000641513 MUSTN1Q8IVN3 82 aa6.12□□□□□ -1.43
PHGDH-219ENST00000641513 ARL17AQ8IVW1 177 aa6.12□□□□□ -1.43
PHGDH-219ENST00000641513 PPDPFLQ8WWR9 84 aa6.12□□□□□ -1.43
PHGDH-219ENST00000641513 B9D2Q9BPU9 175 aa6.12□□□□□ -1.43
PHGDH-219ENST00000641513 H3BNG1 76 aa6.11□□□□□ -1.43
PHGDH-219ENST00000641513 TCL1BO95988 128 aa6.11□□□□□ -1.43
PHGDH-219ENST00000641513 SMCPP49901 116 aaPredicted RBP6.11□□□□□ -1.43
PHGDH-219ENST00000641513 FOXI1Q12951 378 aa6.11□□□□□ -1.43
PHGDH-219ENST00000641513 ATXN8Q156A1 80 aa6.11□□□□□ -1.43
PHGDH-219ENST00000641513 LINC00242Q5T6M2 205 aa6.11□□□□□ -1.43
PHGDH-219ENST00000641513 LELP1Q5T871 98 aa6.11□□□□□ -1.43
PHGDH-219ENST00000641513 SFTA2Q6UW10 78 aa6.11□□□□□ -1.43
PHGDH-219ENST00000641513 CDKN2A-AS1Q9UH64 79 aa6.11□□□□□ -1.43
PHGDH-219ENST00000641513 TRAV8-3A0A0A6YYJ7 113 aa6.1□□□□□ -1.43
PHGDH-219ENST00000641513 EIF4EBP3O60516 100 aaPredicted RBP6.1□□□□□ -1.43
PHGDH-219ENST00000641513 PSMB2P49721 201 aa6.1□□□□□ -1.43
PHGDH-219ENST00000641513 CLPSL2Q6UWE3 100 aa6.1□□□□□ -1.43
PHGDH-219ENST00000641513 LYPD5Q6UWN5 251 aa6.1□□□□□ -1.43
PHGDH-219ENST00000641513 GAGE12HA6NDE8 117 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms