RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 TMEM101Q96IK0 257 aa11.51□□□□□ -0.57
PHGDH-216ENST00000641375 A0A1B0GWB2 263 aa11.51□□□□□ -0.57
PHGDH-216ENST00000641375 ZNF22P17026 224 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-216ENST00000641375 C12orf74Q32Q52 190 aa11.5□□□□□ -0.57
PHGDH-216ENST00000641375 MYMXA0A1B0GTQ4 84 aa11.5□□□□□ -0.57
PHGDH-216ENST00000641375 TMEM223A0PJW6 202 aa11.5□□□□□ -0.57
PHGDH-216ENST00000641375 MT-ATP8P03928 68 aa11.5□□□□□ -0.57
PHGDH-216ENST00000641375 MAPKAPK5-AS1Q8N8E1 139 aa11.5□□□□□ -0.57
PHGDH-216ENST00000641375 UBE2D1P51668 147 aa11.49□□□□□ -0.57
PHGDH-216ENST00000641375 CDC42SE2Q9NRR3 84 aa11.49□□□□□ -0.57
PHGDH-216ENST00000641375 F5H768 121 aa11.48□□□□□ -0.57
PHGDH-216ENST00000641375 VSIG2Q96IQ7 327 aa11.48□□□□□ -0.57
PHGDH-216ENST00000641375 ANAPC13Q9BS18 74 aa11.48□□□□□ -0.57
PHGDH-216ENST00000641375 C11orf68Q9H3H3 251 aaKnown RBP11.48□□□□□ -0.57
PHGDH-216ENST00000641375 RETNQ9HD89 108 aa11.48□□□□□ -0.57
PHGDH-216ENST00000641375 CHCHD5Q9BSY4 110 aa11.48□□□□□ -0.57
PHGDH-216ENST00000641375 A0A0J9YY99 117 aa11.47□□□□□ -0.57
PHGDH-216ENST00000641375 XGP55808 180 aa11.47□□□□□ -0.57
PHGDH-216ENST00000641375 TIRAPP58753 221 aa11.47□□□□□ -0.57
PHGDH-216ENST00000641375 ZNF815PA8K554 130 aa11.46□□□□□ -0.57
PHGDH-216ENST00000641375 LEPROTO15243 131 aa11.46□□□□□ -0.57
PHGDH-216ENST00000641375 FAM19A3Q7Z5A8 133 aa11.46□□□□□ -0.57
PHGDH-216ENST00000641375 HERVK_113P63121 156 aa11.45□□□□□ -0.58
PHGDH-216ENST00000641375 MDFIQ99750 246 aa11.45□□□□□ -0.58
PHGDH-216ENST00000641375 NOTCH1P46531 2555 aa11.45□□□□□ -0.58
PHGDH-216ENST00000641375 J3QQQ9 107 aa11.45□□□□□ -0.58
PHGDH-216ENST00000641375 HTN3P15516 51 aa11.45□□□□□ -0.58
PHGDH-216ENST00000641375 LGALS3P17931 250 aaKnown RBP11.45□□□□□ -0.58
PHGDH-216ENST00000641375 MRPL23Q16540 153 aaKnown RBP11.44□□□□□ -0.58
PHGDH-216ENST00000641375 PLEKHB2Q96CS7 222 aa11.44□□□□□ -0.58
PHGDH-216ENST00000641375 IGLV5-45A0A087WSX0 123 aa11.44□□□□□ -0.58
PHGDH-216ENST00000641375 ZFAND6Q6FIF0 208 aa11.44□□□□□ -0.58
PHGDH-216ENST00000641375 A0A096LPF7 62 aa11.43□□□□□ -0.58
PHGDH-216ENST00000641375 KPRPQ5T749 579 aaPredicted RBP11.43□□□□□ -0.58
PHGDH-216ENST00000641375 SCGB1D4Q6XE38 83 aa11.43□□□□□ -0.58
PHGDH-216ENST00000641375 PPDPFLQ8WWR9 84 aa11.43□□□□□ -0.58
PHGDH-216ENST00000641375 TRAV13-1A0A0B4J241 112 aa11.43□□□□□ -0.58
PHGDH-216ENST00000641375 LINC00242Q5T6M2 205 aa11.43□□□□□ -0.58
PHGDH-216ENST00000641375 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
PHGDH-216ENST00000641375 NBEAL1Q6ZS30 2694 aa11.43□□□□□ -0.58
PHGDH-216ENST00000641375 TSPEAR-AS2P59090 65 aa11.42□□□□□ -0.58
PHGDH-216ENST00000641375 IGHV1-58A0A0C4DH39 117 aa11.41□□□□□ -0.58
PHGDH-216ENST00000641375 A0A1B0GUV1 79 aa11.41□□□□□ -0.58
PHGDH-216ENST00000641375 SMCPP49901 116 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-216ENST00000641375 HERV-K104P63124 156 aa11.41□□□□□ -0.58
PHGDH-216ENST00000641375 IGHV3-64A0A075B6Q5 118 aa11.41□□□□□ -0.58
PHGDH-216ENST00000641375 B5MCH6 92 aa11.41□□□□□ -0.58
PHGDH-216ENST00000641375 IGHV3-30-3P0DP02 117 aa11.41□□□□□ -0.58
PHGDH-216ENST00000641375 CDKN2A-AS1Q9UH64 79 aa11.41□□□□□ -0.58
PHGDH-216ENST00000641375 TMEM262E9PQX1 116 aa11.4□□□□□ -0.58
PHGDH-216ENST00000641375 K7EIL1 84 aa11.4□□□□□ -0.58
PHGDH-216ENST00000641375 PRB2P02812 416 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-216ENST00000641375 IGLV4-60A0A075B6I1 120 aa11.4□□□□□ -0.59
PHGDH-216ENST00000641375 A0A0J9YWU9 116 aa11.4□□□□□ -0.59
PHGDH-216ENST00000641375 H3BNG1 76 aa11.4□□□□□ -0.59
PHGDH-216ENST00000641375 HIST1H4GQ99525 98 aa11.4□□□□□ -0.59
PHGDH-216ENST00000641375 COX6A2Q02221 97 aa11.39□□□□□ -0.59
PHGDH-216ENST00000641375 TRAV8-3A0A0A6YYJ7 113 aa11.38□□□□□ -0.59
PHGDH-216ENST00000641375 DEFB121Q5J5C9 76 aa11.38□□□□□ -0.59
PHGDH-216ENST00000641375 TEN1Q86WV5 123 aa11.38□□□□□ -0.59
PHGDH-216ENST00000641375 NHLRC4P0CG21 123 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-216ENST00000641375 TM2D3Q9BRN9 247 aa11.38□□□□□ -0.59
PHGDH-216ENST00000641375 Q6ZTC4 211 aa11.37□□□□□ -0.59
PHGDH-216ENST00000641375 CARD19Q96LW7 228 aa11.37□□□□□ -0.59
PHGDH-216ENST00000641375 LYRM7Q5U5X0 104 aa11.37□□□□□ -0.59
PHGDH-216ENST00000641375 C11orf45Q8TAV5 145 aa11.37□□□□□ -0.59
PHGDH-216ENST00000641375 MGAM2Q2M2H8 2515 aa11.36□□□□□ -0.59
PHGDH-216ENST00000641375 LELP1Q5T871 98 aa11.35□□□□□ -0.59
PHGDH-216ENST00000641375 SRSF9Q13242 221 aaKnown RBP eCLIP11.35□□□□□ -0.59
PHGDH-216ENST00000641375 TENM3Q9P273 2699 aa11.34□□□□□ -0.59
PHGDH-216ENST00000641375 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
PHGDH-216ENST00000641375 IGLV5-39A0A0G2JS06 123 aa11.34□□□□□ -0.59
PHGDH-216ENST00000641375 NDUFA12Q9UI09 145 aa11.34□□□□□ -0.59
PHGDH-216ENST00000641375 SMIM20Q8N5G0 67 aa11.33□□□□□ -0.6
PHGDH-216ENST00000641375 MRAPQ8TCY5 172 aa11.33□□□□□ -0.6
PHGDH-216ENST00000641375 SMIM1B2RUZ4 78 aa11.33□□□□□ -0.6
PHGDH-216ENST00000641375 NDUFV3P56181 108 aaKnown RBP11.33□□□□□ -0.6
PHGDH-216ENST00000641375 Q6Q795 121 aa11.33□□□□□ -0.6
PHGDH-216ENST00000641375 LINC00959A0A1B0GUT2 108 aa11.32□□□□□ -0.6
PHGDH-216ENST00000641375 NANOS2P60321 138 aaKnown RBP11.32□□□□□ -0.6
PHGDH-216ENST00000641375 C10orf126Q8N4M7 172 aa11.31□□□□□ -0.6
PHGDH-216ENST00000641375 TRBV20-1A0A075B6N2 111 aa11.31□□□□□ -0.6
PHGDH-216ENST00000641375 DEFB131BA0A096LNP1 70 aa11.31□□□□□ -0.6
PHGDH-216ENST00000641375 M0QXV9 152 aa11.31□□□□□ -0.6
PHGDH-216ENST00000641375 PSMB2P49721 201 aa11.31□□□□□ -0.6
PHGDH-216ENST00000641375 SS18Q15532 418 aa11.31□□□□□ -0.6
PHGDH-216ENST00000641375 LYPD5Q6UWN5 251 aa11.31□□□□□ -0.6
PHGDH-216ENST00000641375 A0A0J9YXY3 114 aa11.3□□□□□ -0.6
PHGDH-216ENST00000641375 GAGE2BQ13066 116 aa11.3□□□□□ -0.6
PHGDH-216ENST00000641375 GAGE2EQ4V326 116 aa11.3□□□□□ -0.6
PHGDH-216ENST00000641375 GAGE2DQ9UEU5 116 aa11.3□□□□□ -0.6
PHGDH-216ENST00000641375 IGHV3OR16-9A0A0B4J2B5 98 aa11.3□□□□□ -0.6
PHGDH-216ENST00000641375 NDUFA1O15239 70 aa11.29□□□□□ -0.6
PHGDH-216ENST00000641375 ANGP03950 147 aaKnown RBP11.28□□□□□ -0.6
PHGDH-216ENST00000641375 IFITM1P13164 125 aa11.28□□□□□ -0.6
PHGDH-216ENST00000641375 LINC00269Q8N2A0 174 aa11.28□□□□□ -0.6
PHGDH-216ENST00000641375 A0A087WZ39 114 aa11.27□□□□□ -0.6
PHGDH-216ENST00000641375 CCDC179H3BU77 68 aa11.27□□□□□ -0.6
PHGDH-216ENST00000641375 IGHV3-30P01768 117 aa11.27□□□□□ -0.6
PHGDH-216ENST00000641375 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms