RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 IGLV5-39A0A0G2JS06 123 aa11.95□□□□□ -0.5
PHGDH-208ENST00000641023 A0A0J9YWU9 116 aa11.95□□□□□ -0.5
PHGDH-208ENST00000641023 H3BNG1 76 aa11.95□□□□□ -0.5
PHGDH-208ENST00000641023 A0A0J9YXY3 114 aa11.95□□□□□ -0.5
PHGDH-208ENST00000641023 TMEM238LA0A1B0GVL6 79 aa11.95□□□□□ -0.5
PHGDH-208ENST00000641023 A6NJY4 79 aa11.95□□□□□ -0.5
PHGDH-208ENST00000641023 SMIM1B2RUZ4 78 aa11.95□□□□□ -0.5
PHGDH-208ENST00000641023 TMEM238C9JI98 176 aa11.95□□□□□ -0.5
PHGDH-208ENST00000641023 SPATA25Q9BR10 227 aa11.95□□□□□ -0.5
PHGDH-208ENST00000641023 DEFB121Q5J5C9 76 aa11.94□□□□□ -0.5
PHGDH-208ENST00000641023 Q6ZTC4 211 aa11.94□□□□□ -0.5
PHGDH-208ENST00000641023 RAB37Q96AX2 223 aa11.94□□□□□ -0.5
PHGDH-208ENST00000641023 LELP1Q5T871 98 aa11.93□□□□□ -0.5
PHGDH-208ENST00000641023 LINC00959A0A1B0GUT2 108 aa11.93□□□□□ -0.5
PHGDH-208ENST00000641023 C9orf118A6NHY6 69 aa11.93□□□□□ -0.5
PHGDH-208ENST00000641023 K7EIL1 84 aa11.93□□□□□ -0.5
PHGDH-208ENST00000641023 KPRPQ5T749 579 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-208ENST00000641023 C11orf45Q8TAV5 145 aa11.93□□□□□ -0.5
PHGDH-208ENST00000641023 IGHV3-30P01768 117 aa11.92□□□□□ -0.5
PHGDH-208ENST00000641023 IGHV3-30-5P0DP03 117 aa11.92□□□□□ -0.5
PHGDH-208ENST00000641023 VAMP3Q15836 100 aa11.92□□□□□ -0.5
PHGDH-208ENST00000641023 SS18Q15532 418 aa11.91□□□□□ -0.5
PHGDH-208ENST00000641023 NDUFA1O15239 70 aa11.91□□□□□ -0.5
PHGDH-208ENST00000641023 CCL25O15444 150 aa11.91□□□□□ -0.5
PHGDH-208ENST00000641023 IGHV3OR16-9A0A0B4J2B5 98 aa11.9□□□□□ -0.5
PHGDH-208ENST00000641023 K7ERJ3 54 aa11.9□□□□□ -0.5
PHGDH-208ENST00000641023 TM2D3Q9BRN9 247 aa11.9□□□□□ -0.5
PHGDH-208ENST00000641023 NBEAL1Q6ZS30 2694 aa11.9□□□□□ -0.5
PHGDH-208ENST00000641023 A0A1B0GWB2 263 aa11.9□□□□□ -0.51
PHGDH-208ENST00000641023 H3BUT2 72 aa11.9□□□□□ -0.51
PHGDH-208ENST00000641023 NANOS2P60321 138 aaKnown RBP11.89□□□□□ -0.51
PHGDH-208ENST00000641023 LYPD5Q6UWN5 251 aa11.89□□□□□ -0.51
PHGDH-208ENST00000641023 LINC00269Q8N2A0 174 aa11.88□□□□□ -0.51
PHGDH-208ENST00000641023 MRAPQ8TCY5 172 aa11.88□□□□□ -0.51
PHGDH-208ENST00000641023 Q9H8V8 135 aa11.88□□□□□ -0.51
PHGDH-208ENST00000641023 A0A087WZ39 114 aa11.88□□□□□ -0.51
PHGDH-208ENST00000641023 ANGP03950 147 aaKnown RBP11.88□□□□□ -0.51
PHGDH-208ENST00000641023 MGAM2Q2M2H8 2515 aa11.87□□□□□ -0.51
PHGDH-208ENST00000641023 DEFB131BA0A096LNP1 70 aa11.87□□□□□ -0.51
PHGDH-208ENST00000641023 UBE2V1Q13404 147 aa11.87□□□□□ -0.51
PHGDH-208ENST00000641023 CIRBPQ14011 172 aaKnown RBP11.87□□□□□ -0.51
PHGDH-208ENST00000641023 LITAFQ99732 161 aa11.87□□□□□ -0.51
PHGDH-208ENST00000641023 TIMM17BO60830 172 aa11.87□□□□□ -0.51
PHGDH-208ENST00000641023 RPL24P83731 157 aaKnown RBP11.87□□□□□ -0.51
PHGDH-208ENST00000641023 CLPSL2Q6UWE3 100 aa11.87□□□□□ -0.51
PHGDH-208ENST00000641023 XCL1P47992 114 aa11.86□□□□□ -0.51
PHGDH-208ENST00000641023 REG3AQ06141 175 aa11.86□□□□□ -0.51
PHGDH-208ENST00000641023 PRSS2P07478 247 aa11.85□□□□□ -0.51
PHGDH-208ENST00000641023 MUSTN1Q8IVN3 82 aa11.85□□□□□ -0.51
PHGDH-208ENST00000641023 SPANXDQ9BXN6 97 aa11.85□□□□□ -0.51
PHGDH-208ENST00000641023 SPANXCQ9NY87 97 aa11.85□□□□□ -0.51
PHGDH-208ENST00000641023 HERV-K104P63124 156 aa11.85□□□□□ -0.51
PHGDH-208ENST00000641023 C5orf38Q86SI9 138 aa11.85□□□□□ -0.51
PHGDH-208ENST00000641023 NAA38Q9BRA0 125 aaKnown RBP11.85□□□□□ -0.51
PHGDH-208ENST00000641023 TENM3Q9P273 2699 aa11.84□□□□□ -0.51
PHGDH-208ENST00000641023 A0A1W2PPM0 123 aa11.84□□□□□ -0.51
PHGDH-208ENST00000641023 ADAMTSL4-AS1Q5T5F5 129 aa11.84□□□□□ -0.51
PHGDH-208ENST00000641023 Q8N3U1 123 aa11.84□□□□□ -0.51
PHGDH-208ENST00000641023 COX7B2Q8TF08 81 aa11.84□□□□□ -0.51
PHGDH-208ENST00000641023 ZNF625Q96I27 306 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-208ENST00000641023 APOMO95445 188 aa11.83□□□□□ -0.51
PHGDH-208ENST00000641023 IGLL5B9A064 214 aa11.83□□□□□ -0.52
PHGDH-208ENST00000641023 FABP2P12104 132 aa11.83□□□□□ -0.52
PHGDH-208ENST00000641023 MIAQ16674 131 aa11.83□□□□□ -0.52
PHGDH-208ENST00000641023 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.52
PHGDH-208ENST00000641023 A4D1N5 150 aa11.82□□□□□ -0.52
PHGDH-208ENST00000641023 GAGE10A6NGK3 116 aa11.82□□□□□ -0.52
PHGDH-208ENST00000641023 CD164L2Q6UWJ8 174 aa11.82□□□□□ -0.52
PHGDH-208ENST00000641023 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-208ENST00000641023 CFC1BP0CG36 223 aa11.81□□□□□ -0.52
PHGDH-208ENST00000641023 CFC1P0CG37 223 aa11.81□□□□□ -0.52
PHGDH-208ENST00000641023 MEIG1Q5JSS6 88 aa11.81□□□□□ -0.52
PHGDH-208ENST00000641023 GTF2H5Q6ZYL4 71 aa11.81□□□□□ -0.52
PHGDH-208ENST00000641023 LINC01561Q8N1V8 128 aa11.81□□□□□ -0.52
PHGDH-208ENST00000641023 IFITM1P13164 125 aa11.8□□□□□ -0.52
PHGDH-208ENST00000641023 CHCHD10Q8WYQ3 142 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-208ENST00000641023 TRAV10A0A0B4J240 114 aa11.8□□□□□ -0.52
PHGDH-208ENST00000641023 PGPEP1Q9NXJ5 209 aa11.8□□□□□ -0.52
PHGDH-208ENST00000641023 SFTA2Q6UW10 78 aa11.79□□□□□ -0.52
PHGDH-208ENST00000641023 KLK12Q9UKR0 248 aa11.79□□□□□ -0.52
PHGDH-208ENST00000641023 IGLV10-54A0A075B6I4 117 aa11.79□□□□□ -0.52
PHGDH-208ENST00000641023 PRR34Q9NV39 138 aa11.79□□□□□ -0.52
PHGDH-208ENST00000641023 SPCS1Q9Y6A9 102 aa11.79□□□□□ -0.52
PHGDH-208ENST00000641023 COX7A2LO14548 114 aa11.78□□□□□ -0.52
PHGDH-208ENST00000641023 COPS9Q8WXC6 57 aa11.78□□□□□ -0.52
PHGDH-208ENST00000641023 PRO1854Q9UHT4 67 aa11.78□□□□□ -0.52
PHGDH-208ENST00000641023 A0A0B4J2C4 111 aa11.77□□□□□ -0.52
PHGDH-208ENST00000641023 K7EP34 96 aa11.77□□□□□ -0.52
PHGDH-208ENST00000641023 ESRGQ1W209 222 aa11.77□□□□□ -0.52
PHGDH-208ENST00000641023 C6orf226Q5I0X4 101 aa11.77□□□□□ -0.52
PHGDH-208ENST00000641023 NPC2P61916 151 aa11.77□□□□□ -0.53
PHGDH-208ENST00000641023 DAND5Q8N907 189 aa11.77□□□□□ -0.53
PHGDH-208ENST00000641023 A0A0U1RRA0 63 aa11.76□□□□□ -0.53
PHGDH-208ENST00000641023 IGHV3-33P01772 117 aa11.76□□□□□ -0.53
PHGDH-208ENST00000641023 WFDC10BQ8IUB3 73 aa11.76□□□□□ -0.53
PHGDH-208ENST00000641023 CRPP02741 224 aa11.75□□□□□ -0.53
PHGDH-208ENST00000641023 MALP21145 153 aa11.75□□□□□ -0.53
PHGDH-208ENST00000641023 Q8IZM0 81 aa11.75□□□□□ -0.53
PHGDH-208ENST00000641023 C15orf53Q8NAA6 179 aa11.75□□□□□ -0.53
PHGDH-208ENST00000641023 HUWE1Q7Z6Z7 4374 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms