RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 TRAV13-1A0A0B4J241 112 aa9.78□□□□□ -0.84
PAX6-280ENST00000640872 TMEM126AQ9H061 195 aa9.78□□□□□ -0.84
PAX6-280ENST00000640872 J3QKU1 62 aa9.77□□□□□ -0.85
PAX6-280ENST00000640872 PLA2G2AP14555 144 aa9.77□□□□□ -0.85
PAX6-280ENST00000640872 NTM-AS1Q6ZSK4 140 aa9.77□□□□□ -0.85
PAX6-280ENST00000640872 LINC01356Q8N9X3 169 aa9.77□□□□□ -0.85
PAX6-280ENST00000640872 PEMTQ9UBM1 199 aa9.77□□□□□ -0.85
PAX6-280ENST00000640872 ACANP16112 2415 aa9.76□□□□□ -0.85
PAX6-280ENST00000640872 C3orf56Q8N813 242 aa9.76□□□□□ -0.85
PAX6-280ENST00000640872 IL17DQ8TAD2 202 aa9.76□□□□□ -0.85
PAX6-280ENST00000640872 CDC42SE2Q9NRR3 84 aa9.75□□□□□ -0.85
PAX6-280ENST00000640872 DSCR9P59020 149 aa9.74□□□□□ -0.85
PAX6-280ENST00000640872 HIST2H2BCQ6DN03 193 aa9.74□□□□□ -0.85
PAX6-280ENST00000640872 HIST2H2BDQ6DRA6 164 aa9.74□□□□□ -0.85
PAX6-280ENST00000640872 C5orf38Q86SI9 138 aa9.74□□□□□ -0.85
PAX6-280ENST00000640872 Q96MF0 132 aa9.74□□□□□ -0.85
PAX6-280ENST00000640872 TRBV10-1A0A0K0K1A3 114 aa9.74□□□□□ -0.85
PAX6-280ENST00000640872 CXCL5P42830 114 aa9.74□□□□□ -0.85
PAX6-280ENST00000640872 RPL28P46779 137 aaKnown RBP9.74□□□□□ -0.85
PAX6-280ENST00000640872 RPL36AP83881 106 aaKnown RBP9.74□□□□□ -0.85
PAX6-280ENST00000640872 Q6YL49 198 aa9.74□□□□□ -0.85
PAX6-280ENST00000640872 RPL36ALQ969Q0 106 aaKnown RBP9.74□□□□□ -0.85
PAX6-280ENST00000640872 CR1P17927 2039 aa9.73□□□□□ -0.85
PAX6-280ENST00000640872 J3QLI3 93 aa9.73□□□□□ -0.85
PAX6-280ENST00000640872 K7EQD1 137 aa9.73□□□□□ -0.85
PAX6-280ENST00000640872 PF4P02776 101 aa9.73□□□□□ -0.85
PAX6-280ENST00000640872 INAFM2P0DMQ5 153 aa9.73□□□□□ -0.85
PAX6-280ENST00000640872 TRGV1A0A0A0MS02 117 aa9.73□□□□□ -0.85
PAX6-280ENST00000640872 ATP5G1P05496 136 aa9.73□□□□□ -0.85
PAX6-280ENST00000640872 C3orf22Q8N5N4 141 aa9.73□□□□□ -0.85
PAX6-280ENST00000640872 XCL2Q9UBD3 114 aa9.73□□□□□ -0.85
PAX6-280ENST00000640872 MTORP42345 2549 aa9.73□□□□□ -0.85
PAX6-280ENST00000640872 TRAV13-2A0A0B4J235 113 aa9.72□□□□□ -0.85
PAX6-280ENST00000640872 DEFB114Q30KQ6 69 aa9.72□□□□□ -0.85
PAX6-280ENST00000640872 C1orf158Q8N1D5 194 aa9.72□□□□□ -0.85
PAX6-280ENST00000640872 DYNLRB2Q8TF09 96 aa9.72□□□□□ -0.85
PAX6-280ENST00000640872 MALP21145 153 aa9.72□□□□□ -0.85
PAX6-280ENST00000640872 Q9HAA7 133 aa9.72□□□□□ -0.85
PAX6-280ENST00000640872 FSHBP01225 129 aa9.71□□□□□ -0.85
PAX6-280ENST00000640872 IGHV4-31P0DP07 118 aa9.71□□□□□ -0.85
PAX6-280ENST00000640872 LINC00337Q8N6G1 96 aa9.71□□□□□ -0.85
PAX6-280ENST00000640872 PDZD2O15018 2839 aa9.71□□□□□ -0.85
PAX6-280ENST00000640872 IGKV2-28A0A075B6P5 120 aa9.71□□□□□ -0.86
PAX6-280ENST00000640872 UQCRQO14949 82 aa9.71□□□□□ -0.86
PAX6-280ENST00000640872 IGKV2D-28P01615 120 aa9.71□□□□□ -0.86
PAX6-280ENST00000640872 CRPP02741 224 aa9.71□□□□□ -0.86
PAX6-280ENST00000640872 C9orf153Q5TBE3 101 aa9.71□□□□□ -0.86
PAX6-280ENST00000640872 GAGE2AQ6NT46 116 aa9.71□□□□□ -0.86
PAX6-280ENST00000640872 C4orf3Q8WVX3 66 aa9.7□□□□□ -0.86
PAX6-280ENST00000640872 ODF3L2Q3SX64 289 aa9.7□□□□□ -0.86
PAX6-280ENST00000640872 Q6ZTI0 123 aa9.7□□□□□ -0.86
PAX6-280ENST00000640872 LINC00526Q96FQ7 95 aa9.7□□□□□ -0.86
PAX6-280ENST00000640872 MIR7-3HGQ8N6C7 128 aa9.69□□□□□ -0.86
PAX6-280ENST00000640872 UNC79Q9P2D8 2635 aa9.68□□□□□ -0.86
PAX6-280ENST00000640872 HIST1H4AP62805 103 aaKnown RBP9.68□□□□□ -0.86
PAX6-280ENST00000640872 COX7B2Q8TF08 81 aa9.68□□□□□ -0.86
PAX6-280ENST00000640872 OVOL2Q9BRP0 275 aa9.68□□□□□ -0.86
PAX6-280ENST00000640872 SND1-IT1Q9HBX3 110 aa9.68□□□□□ -0.86
PAX6-280ENST00000640872 A0A087WYN8 130 aa9.67□□□□□ -0.86
PAX6-280ENST00000640872 DEFB113Q30KQ7 82 aa9.67□□□□□ -0.86
PAX6-280ENST00000640872 TMEM243Q9BU79 118 aa9.67□□□□□ -0.86
PAX6-280ENST00000640872 SMIM11BQ8TCY0 68 aa9.67□□□□□ -0.86
PAX6-280ENST00000640872 GCN1Q92616 2671 aaKnown RBP9.67□□□□□ -0.86
PAX6-280ENST00000640872 UBE2L6O14933 153 aa9.66□□□□□ -0.86
PAX6-280ENST00000640872 C9orf129Q5T035 196 aaKnown RBP9.66□□□□□ -0.86
PAX6-280ENST00000640872 KRTAP1-3Q8IUG1 177 aa9.66□□□□□ -0.86
PAX6-280ENST00000640872 STHQ8IWL8 128 aa9.66□□□□□ -0.86
PAX6-280ENST00000640872 C2orf48Q96LS8 159 aa9.66□□□□□ -0.86
PAX6-280ENST00000640872 COX7CP15954 63 aa9.66□□□□□ -0.86
PAX6-280ENST00000640872 OBSCN-AS1Q96MR7 158 aa9.66□□□□□ -0.86
PAX6-280ENST00000640872 KHDC1LQ5JSQ8 128 aa9.65□□□□□ -0.86
PAX6-280ENST00000640872 HECTD1Q9ULT8 2610 aa9.65□□□□□ -0.87
PAX6-280ENST00000640872 WNK1Q9H4A3 2382 aa9.64□□□□□ -0.87
PAX6-280ENST00000640872 DNAL4O96015 105 aa9.64□□□□□ -0.87
PAX6-280ENST00000640872 CCL18P55774 89 aa9.64□□□□□ -0.87
PAX6-280ENST00000640872 H0YGX0 51 aa9.63□□□□□ -0.87
PAX6-280ENST00000640872 C14orf132Q9NPU4 83 aa9.63□□□□□ -0.87
PAX6-280ENST00000640872 TOMM7Q9P0U1 55 aa9.63□□□□□ -0.87
PAX6-280ENST00000640872 NOTCH2Q04721 2471 aa9.63□□□□□ -0.87
PAX6-280ENST00000640872 ANK3Q12955 4377 aaKnown RBP9.63□□□□□ -0.87
PAX6-280ENST00000640872 TRAV25A0A0B4J276 109 aa9.63□□□□□ -0.87
PAX6-280ENST00000640872 ATOX1O00244 68 aa9.63□□□□□ -0.87
PAX6-280ENST00000640872 LINC00158P58513 81 aa9.63□□□□□ -0.87
PAX6-280ENST00000640872 LRRC75A-AS1Q8N1F1 130 aa9.63□□□□□ -0.87
PAX6-280ENST00000640872 NOP10Q9NPE3 64 aaKnown RBP9.63□□□□□ -0.87
PAX6-280ENST00000640872 FASNP49327 2511 aaKnown RBP9.62□□□□□ -0.87
PAX6-280ENST00000640872 CRYGAP11844 174 aa9.62□□□□□ -0.87
PAX6-280ENST00000640872 WFDC11Q8NEX6 87 aa9.62□□□□□ -0.87
PAX6-280ENST00000640872 LOC100131303A0A0U1RQF7 123 aa9.61□□□□□ -0.87
PAX6-280ENST00000640872 KLK5Q9Y337 293 aaPredicted RBP9.61□□□□□ -0.87
PAX6-280ENST00000640872 IGHV3OR16-9A0A0B4J2B5 98 aa9.61□□□□□ -0.87
PAX6-280ENST00000640872 IBA57-AS1B1ANH7 110 aa9.61□□□□□ -0.87
PAX6-280ENST00000640872 Q6JHZ5 121 aa9.61□□□□□ -0.87
PAX6-280ENST00000640872 PLAC8L1A1L4L8 177 aa9.6□□□□□ -0.87
PAX6-280ENST00000640872 LINC00846Q9NV44 126 aa9.6□□□□□ -0.87
PAX6-280ENST00000640872 IGLV4-60A0A075B6I1 120 aa9.6□□□□□ -0.87
PAX6-280ENST00000640872 LECT2O14960 151 aa9.59□□□□□ -0.87
PAX6-280ENST00000640872 RPL18AQ02543 176 aaKnown RBP9.59□□□□□ -0.87
PAX6-280ENST00000640872 JMJD1CQ15652 2540 aa9.59□□□□□ -0.87
PAX6-280ENST00000640872 IGKV3OR2-268A0A0C4DH90 116 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms