RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 MRPL23Q16540 153 aaKnown RBP8.18□□□□□ -1.1
ERGIC3-220ENST00000640748 RNASE13Q5GAN3 156 aaKnown RBP8.18□□□□□ -1.1
ERGIC3-220ENST00000640748 TMEM170BQ5T4T1 132 aa8.18□□□□□ -1.1
ERGIC3-220ENST00000640748 SH2D6Q7Z4S9 175 aa8.18□□□□□ -1.1
ERGIC3-220ENST00000640748 CHCHD5Q9BSY4 110 aa8.18□□□□□ -1.1
ERGIC3-220ENST00000640748 ICOSQ9Y6W8 199 aa8.18□□□□□ -1.1
ERGIC3-220ENST00000640748 LRP1BQ9NZR2 4599 aa8.17□□□□□ -1.1
ERGIC3-220ENST00000640748 TINCRA0A1B0GVN0 87 aa8.17□□□□□ -1.1
ERGIC3-220ENST00000640748 SIVA1O15304 175 aa8.17□□□□□ -1.1
ERGIC3-220ENST00000640748 GAGE6Q13070 117 aa8.17□□□□□ -1.1
ERGIC3-220ENST00000640748 PCP2Q8IVA1 136 aa8.17□□□□□ -1.1
ERGIC3-220ENST00000640748 CDC42SE2Q9NRR3 84 aa8.17□□□□□ -1.1
ERGIC3-220ENST00000640748 A0A096LPF7 62 aa8.16□□□□□ -1.1
ERGIC3-220ENST00000640748 ZNF22P17026 224 aaPredicted RBP8.16□□□□□ -1.1
ERGIC3-220ENST00000640748 UBE2D1P51668 147 aa8.16□□□□□ -1.1
ERGIC3-220ENST00000640748 TP73-AS1Q9UF72 201 aa8.16□□□□□ -1.1
ERGIC3-220ENST00000640748 TRAV8-6A0A0B4J262 113 aa8.15□□□□□ -1.1
ERGIC3-220ENST00000640748 TMEM223A0PJW6 202 aa8.15□□□□□ -1.1
ERGIC3-220ENST00000640748 TIRAPP58753 221 aa8.15□□□□□ -1.1
ERGIC3-220ENST00000640748 SEC11AP67812 179 aa8.15□□□□□ -1.1
ERGIC3-220ENST00000640748 UBE2DNLQ8IWF7 75 aa8.15□□□□□ -1.1
ERGIC3-220ENST00000640748 SNHG12Q9BXW3 62 aa8.15□□□□□ -1.1
ERGIC3-220ENST00000640748 H3BNG1 76 aa8.14□□□□□ -1.11
ERGIC3-220ENST00000640748 LBHQ53QV2 105 aaPredicted RBP8.14□□□□□ -1.11
ERGIC3-220ENST00000640748 C2orf91Q6ZV80 131 aa8.14□□□□□ -1.11
ERGIC3-220ENST00000640748 FAM19A3Q7Z5A8 133 aa8.14□□□□□ -1.11
ERGIC3-220ENST00000640748 GEMIN7Q9H840 131 aaKnown RBP8.14□□□□□ -1.11
ERGIC3-220ENST00000640748 EREGO14944 169 aa8.13□□□□□ -1.11
ERGIC3-220ENST00000640748 LEPROTO15243 131 aa8.13□□□□□ -1.11
ERGIC3-220ENST00000640748 HERVK_113P63121 156 aa8.13□□□□□ -1.11
ERGIC3-220ENST00000640748 C1orf134Q5TEV5 83 aa8.13□□□□□ -1.11
ERGIC3-220ENST00000640748 MAPKAPK5-AS1Q8N8E1 139 aa8.13□□□□□ -1.11
ERGIC3-220ENST00000640748 TTTY13Q9BZ97 58 aa8.13□□□□□ -1.11
ERGIC3-220ENST00000640748 HIGD1BQ9P298 99 aa8.13□□□□□ -1.11
ERGIC3-220ENST00000640748 MYMXA0A1B0GTQ4 84 aa8.12□□□□□ -1.11
ERGIC3-220ENST00000640748 TMEM262E9PQX1 116 aa8.12□□□□□ -1.11
ERGIC3-220ENST00000640748 H3BRM9 83 aa8.12□□□□□ -1.11
ERGIC3-220ENST00000640748 BATFQ16520 125 aa8.12□□□□□ -1.11
ERGIC3-220ENST00000640748 LINC00469Q8N7U9 141 aa8.12□□□□□ -1.11
ERGIC3-220ENST00000640748 PLEKHB2Q96CS7 222 aa8.12□□□□□ -1.11
ERGIC3-220ENST00000640748 APOBP04114 4563 aaKnown RBP8.12□□□□□ -1.11
ERGIC3-220ENST00000640748 IGLV4-60A0A075B6I1 120 aa8.11□□□□□ -1.11
ERGIC3-220ENST00000640748 TRAV13-1A0A0B4J241 112 aa8.11□□□□□ -1.11
ERGIC3-220ENST00000640748 A0A1B0GUV1 79 aa8.11□□□□□ -1.11
ERGIC3-220ENST00000640748 ZNF815PA8K554 130 aa8.11□□□□□ -1.11
ERGIC3-220ENST00000640748 LGALS3P17931 250 aaKnown RBP8.11□□□□□ -1.11
ERGIC3-220ENST00000640748 HINT1P49773 126 aaPredicted RBP8.11□□□□□ -1.11
ERGIC3-220ENST00000640748 TNP2Q05952 138 aa8.11□□□□□ -1.11
ERGIC3-220ENST00000640748 LELP1Q5T871 98 aa8.11□□□□□ -1.11
ERGIC3-220ENST00000640748 IGLV5-45A0A087WSX0 123 aa8.1□□□□□ -1.11
ERGIC3-220ENST00000640748 J3QQQ9 107 aa8.1□□□□□ -1.11
ERGIC3-220ENST00000640748 RBX1P62877 108 aa8.1□□□□□ -1.11
ERGIC3-220ENST00000640748 HSD52Q0P140 79 aa8.1□□□□□ -1.11
ERGIC3-220ENST00000640748 LINC00242Q5T6M2 205 aa8.1□□□□□ -1.11
ERGIC3-220ENST00000640748 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.11
ERGIC3-220ENST00000640748 IGHV1-58A0A0C4DH39 117 aa8.09□□□□□ -1.11
ERGIC3-220ENST00000640748 CDK2AP2O75956 126 aa8.09□□□□□ -1.11
ERGIC3-220ENST00000640748 MPV17L2Q567V2 206 aa8.09□□□□□ -1.11
ERGIC3-220ENST00000640748 IGHV3-64A0A075B6Q5 118 aa8.08□□□□□ -1.12
ERGIC3-220ENST00000640748 C16orf90A8MZG2 172 aa8.08□□□□□ -1.12
ERGIC3-220ENST00000640748 SPINK8P0C7L1 97 aa8.08□□□□□ -1.12
ERGIC3-220ENST00000640748 IGHV3-30-3P0DP02 117 aa8.08□□□□□ -1.12
ERGIC3-220ENST00000640748 TSPEAR-AS2P59090 65 aa8.08□□□□□ -1.12
ERGIC3-220ENST00000640748 COX6A2Q02221 97 aa8.08□□□□□ -1.12
ERGIC3-220ENST00000640748 COL5A1-AS1Q5SY13 56 aa8.08□□□□□ -1.12
ERGIC3-220ENST00000640748 BVES-AS1Q5T3Y7 98 aa8.08□□□□□ -1.12
ERGIC3-220ENST00000640748 LYPD5Q6UWN5 251 aa8.08□□□□□ -1.12
ERGIC3-220ENST00000640748 C15orf53Q8NAA6 179 aa8.08□□□□□ -1.12
ERGIC3-220ENST00000640748 CDKN2A-AS1Q9UH64 79 aa8.08□□□□□ -1.12
ERGIC3-220ENST00000640748 IGKV3OR2-268A0A0C4DH90 116 aa8.07□□□□□ -1.12
ERGIC3-220ENST00000640748 NBDYA0A0U1RRE5 68 aa8.07□□□□□ -1.12
ERGIC3-220ENST00000640748 TAL2Q16559 108 aa8.07□□□□□ -1.12
ERGIC3-220ENST00000640748 SCGB1D4Q6XE38 83 aa8.07□□□□□ -1.12
ERGIC3-220ENST00000640748 TRAV8-3A0A0A6YYJ7 113 aa8.06□□□□□ -1.12
ERGIC3-220ENST00000640748 LINC00959A0A1B0GUT2 108 aa8.06□□□□□ -1.12
ERGIC3-220ENST00000640748 CCL25O15444 150 aa8.06□□□□□ -1.12
ERGIC3-220ENST00000640748 SS18Q15532 418 aa8.06□□□□□ -1.12
ERGIC3-220ENST00000640748 HERC1Q15751 4861 aa8.06□□□□□ -1.12
ERGIC3-220ENST00000640748 C6orf223Q8N319 242 aa8.05□□□□□ -1.12
ERGIC3-220ENST00000640748 ORAOV1Q8WV07 137 aa8.05□□□□□ -1.12
ERGIC3-220ENST00000640748 LINC00588Q9Y4M8 146 aa8.05□□□□□ -1.12
ERGIC3-220ENST00000640748 IGLV5-39A0A0G2JS06 123 aa8.04□□□□□ -1.12
ERGIC3-220ENST00000640748 ANGP03950 147 aaKnown RBP8.04□□□□□ -1.12
ERGIC3-220ENST00000640748 HIST1H4GQ99525 98 aa8.04□□□□□ -1.12
ERGIC3-220ENST00000640748 A6NDN8 102 aa8.03□□□□□ -1.12
ERGIC3-220ENST00000640748 SMIM1B2RUZ4 78 aa8.03□□□□□ -1.12
ERGIC3-220ENST00000640748 GCSHP23434 173 aa8.03□□□□□ -1.12
ERGIC3-220ENST00000640748 CEND1Q8N111 149 aa8.03□□□□□ -1.12
ERGIC3-220ENST00000640748 KRTAP1-5Q9BYS1 174 aa8.03□□□□□ -1.12
ERGIC3-220ENST00000640748 NDUFA12Q9UI09 145 aa8.03□□□□□ -1.12
ERGIC3-220ENST00000640748 REG3AQ06141 175 aa8.02□□□□□ -1.13
ERGIC3-220ENST00000640748 CLPSL2Q6UWE3 100 aa8.02□□□□□ -1.13
ERGIC3-220ENST00000640748 Q8N1X5 172 aa8.02□□□□□ -1.13
ERGIC3-220ENST00000640748 LINC00269Q8N2A0 174 aa8.02□□□□□ -1.13
ERGIC3-220ENST00000640748 SPANXB1Q9NS25 103 aaPredicted RBP8.02□□□□□ -1.13
ERGIC3-220ENST00000640748 IGHV3OR16-9A0A0B4J2B5 98 aa8.01□□□□□ -1.13
ERGIC3-220ENST00000640748 A0A0J9YXY3 114 aa8.01□□□□□ -1.13
ERGIC3-220ENST00000640748 PTTG1IPP53801 180 aa8.01□□□□□ -1.13
ERGIC3-220ENST00000640748 CCL18P55774 89 aa8.01□□□□□ -1.13
ERGIC3-220ENST00000640748 SRSF9Q13242 221 aaKnown RBP eCLIP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms