RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 XCL1P47992 114 aa9.98□□□□□ -0.81
GFAP-237ENST00000640552 CMC4P56277 68 aaPredicted RBP9.98□□□□□ -0.81
GFAP-237ENST00000640552 HERVK_113P63121 156 aa9.96□□□□□ -0.81
GFAP-237ENST00000640552 UBE2D3P61077 147 aa9.96□□□□□ -0.81
GFAP-237ENST00000640552 UBE2D2P62837 147 aa9.96□□□□□ -0.81
GFAP-237ENST00000640552 SPANXB1Q9NS25 103 aaPredicted RBP9.96□□□□□ -0.81
GFAP-237ENST00000640552 FAM222AQ5U5X8 452 aa9.96□□□□□ -0.82
GFAP-237ENST00000640552 C16orf95Q9H693 158 aa9.96□□□□□ -0.82
GFAP-237ENST00000640552 IGLV4-60A0A075B6I1 120 aa9.95□□□□□ -0.82
GFAP-237ENST00000640552 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.95□□□□□ -0.82
GFAP-237ENST00000640552 RPL13AP40429 203 aaKnown RBP9.95□□□□□ -0.82
GFAP-237ENST00000640552 LINC00158P58513 81 aa9.95□□□□□ -0.82
GFAP-237ENST00000640552 CLEC2BQ92478 149 aa9.95□□□□□ -0.82
GFAP-237ENST00000640552 TRBV10-1A0A0K0K1A3 114 aa9.95□□□□□ -0.82
GFAP-237ENST00000640552 IGHV3-33P01772 117 aa9.95□□□□□ -0.82
GFAP-237ENST00000640552 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
GFAP-237ENST00000640552 F5H768 121 aa9.94□□□□□ -0.82
GFAP-237ENST00000640552 PIK3CD-AS1Q5SR53 167 aa9.94□□□□□ -0.82
GFAP-237ENST00000640552 COX6CP09669 75 aa9.93□□□□□ -0.82
GFAP-237ENST00000640552 CDC42SE2Q9NRR3 84 aa9.93□□□□□ -0.82
GFAP-237ENST00000640552 ANK3Q12955 4377 aaKnown RBP9.92□□□□□ -0.82
GFAP-237ENST00000640552 A0A1B0GV72 72 aa9.92□□□□□ -0.82
GFAP-237ENST00000640552 PAX4O43316 350 aa9.92□□□□□ -0.82
GFAP-237ENST00000640552 SLC25A20O43772 301 aa9.92□□□□□ -0.82
GFAP-237ENST00000640552 ATP6V0E2Q8NHE4 81 aa9.92□□□□□ -0.82
GFAP-237ENST00000640552 PLAC8L1A1L4L8 177 aa9.91□□□□□ -0.82
GFAP-237ENST00000640552 TRIAP1O43715 76 aa9.91□□□□□ -0.82
GFAP-237ENST00000640552 FHL2Q14192 279 aa9.91□□□□□ -0.82
GFAP-237ENST00000640552 OR13C6PQ8NH95 151 aa9.91□□□□□ -0.82
GFAP-237ENST00000640552 MIAQ16674 131 aa9.91□□□□□ -0.82
GFAP-237ENST00000640552 PKD1L1Q8TDX9 2849 aa9.91□□□□□ -0.82
GFAP-237ENST00000640552 GAGE12HA6NDE8 117 aa9.91□□□□□ -0.82
GFAP-237ENST00000640552 DAD1P61803 113 aa9.91□□□□□ -0.82
GFAP-237ENST00000640552 ZFAND6Q6FIF0 208 aa9.91□□□□□ -0.82
GFAP-237ENST00000640552 SMCPP49901 116 aaPredicted RBP9.9□□□□□ -0.82
GFAP-237ENST00000640552 C6orf226Q5I0X4 101 aa9.9□□□□□ -0.82
GFAP-237ENST00000640552 TRBV6-8A0A0A6YYG3 113 aa9.9□□□□□ -0.82
GFAP-237ENST00000640552 SMIM1B2RUZ4 78 aa9.9□□□□□ -0.83
GFAP-237ENST00000640552 ANKRD29Q8N6D5 301 aa9.9□□□□□ -0.83
GFAP-237ENST00000640552 NTN5Q8WTR8 489 aaPredicted RBP9.9□□□□□ -0.83
GFAP-237ENST00000640552 Q8N3U1 123 aa9.89□□□□□ -0.83
GFAP-237ENST00000640552 CSNK1G2-AS1Q8NCQ2 148 aa9.89□□□□□ -0.83
GFAP-237ENST00000640552 TRBV20-1A0A075B6N2 111 aa9.89□□□□□ -0.83
GFAP-237ENST00000640552 TRBV6-4A0A1B0GX49 114 aa9.89□□□□□ -0.83
GFAP-237ENST00000640552 ICOSQ9Y6W8 199 aa9.89□□□□□ -0.83
GFAP-237ENST00000640552 ANGP03950 147 aaKnown RBP9.88□□□□□ -0.83
GFAP-237ENST00000640552 OXLD1Q5BKU9 147 aa9.88□□□□□ -0.83
GFAP-237ENST00000640552 C9orf66Q5T8R8 295 aa9.88□□□□□ -0.83
GFAP-237ENST00000640552 TRAV26-1A0A087WT03 109 aa9.88□□□□□ -0.83
GFAP-237ENST00000640552 FOXI1Q12951 378 aa9.88□□□□□ -0.83
GFAP-237ENST00000640552 SIGMAR1Q99720 223 aa9.88□□□□□ -0.83
GFAP-237ENST00000640552 FAM110AQ9BQ89 295 aa9.88□□□□□ -0.83
GFAP-237ENST00000640552 EDA2RQ9HAV5 297 aa9.88□□□□□ -0.83
GFAP-237ENST00000640552 CRYBA4P53673 196 aa9.87□□□□□ -0.83
GFAP-237ENST00000640552 TIRAPP58753 221 aa9.87□□□□□ -0.83
GFAP-237ENST00000640552 ATXN8Q156A1 80 aa9.87□□□□□ -0.83
GFAP-237ENST00000640552 C2orf82Q6UX34 121 aa9.87□□□□□ -0.83
GFAP-237ENST00000640552 PRO0461Q9UI25 63 aa9.87□□□□□ -0.83
GFAP-237ENST00000640552 MIR7-3HGQ8N6C7 128 aa9.87□□□□□ -0.83
GFAP-237ENST00000640552 LINC00308Q8TCZ7 52 aa9.87□□□□□ -0.83
GFAP-237ENST00000640552 LITAFQ99732 161 aa9.86□□□□□ -0.83
GFAP-237ENST00000640552 LINC00526Q96FQ7 95 aa9.86□□□□□ -0.83
GFAP-237ENST00000640552 CLUHP3Q96NS8 147 aa9.86□□□□□ -0.83
GFAP-237ENST00000640552 NDUFA1O15239 70 aa9.85□□□□□ -0.83
GFAP-237ENST00000640552 A0A0B4J2C4 111 aa9.85□□□□□ -0.83
GFAP-237ENST00000640552 IGHV4-28A0A0C4DH34 117 aa9.85□□□□□ -0.83
GFAP-237ENST00000640552 LINC01620Q4KN68 170 aa9.85□□□□□ -0.83
GFAP-237ENST00000640552 LINC00269Q8N2A0 174 aa9.85□□□□□ -0.83
GFAP-237ENST00000640552 IL17DQ8TAD2 202 aa9.85□□□□□ -0.83
GFAP-237ENST00000640552 COX7B2Q8TF08 81 aa9.85□□□□□ -0.83
GFAP-237ENST00000640552 PRO0255Q9UI72 69 aa9.85□□□□□ -0.83
GFAP-237ENST00000640552 TEX49A0A1B0GTD5 131 aa9.84□□□□□ -0.83
GFAP-237ENST00000640552 TEN1Q86WV5 123 aa9.84□□□□□ -0.83
GFAP-237ENST00000640552 MALP21145 153 aa9.84□□□□□ -0.83
GFAP-237ENST00000640552 PPDPFLQ8WWR9 84 aa9.83□□□□□ -0.84
GFAP-237ENST00000640552 RETNQ9HD89 108 aa9.83□□□□□ -0.84
GFAP-237ENST00000640552 X6R8D5 127 aa9.83□□□□□ -0.84
GFAP-237ENST00000640552 CARD19Q96LW7 228 aa9.83□□□□□ -0.84
GFAP-237ENST00000640552 OVOL2Q9BRP0 275 aa9.83□□□□□ -0.84
GFAP-237ENST00000640552 CELA1Q9UNI1 258 aa9.83□□□□□ -0.84
GFAP-237ENST00000640552 SS18Q15532 418 aa9.82□□□□□ -0.84
GFAP-237ENST00000640552 SOSTDC1Q6X4U4 206 aa9.82□□□□□ -0.84
GFAP-237ENST00000640552 APOC4P55056 127 aa9.81□□□□□ -0.84
GFAP-237ENST00000640552 CKS1BP61024 79 aa9.81□□□□□ -0.84
GFAP-237ENST00000640552 PRB2P02812 416 aaPredicted RBP9.81□□□□□ -0.84
GFAP-237ENST00000640552 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
GFAP-237ENST00000640552 SND1-IT1Q9HBX3 110 aa9.81□□□□□ -0.84
GFAP-237ENST00000640552 SPANXCQ9NY87 97 aa9.81□□□□□ -0.84
GFAP-237ENST00000640552 TENM3Q9P273 2699 aa9.81□□□□□ -0.84
GFAP-237ENST00000640552 CRPP02741 224 aa9.8□□□□□ -0.84
GFAP-237ENST00000640552 IGHV4-30-4P0DP06 118 aa9.8□□□□□ -0.84
GFAP-237ENST00000640552 LINC00959A0A1B0GUT2 108 aa9.8□□□□□ -0.84
GFAP-237ENST00000640552 SBSPONQ8IVN8 264 aa9.8□□□□□ -0.84
GFAP-237ENST00000640552 Q9HAA7 133 aa9.8□□□□□ -0.84
GFAP-237ENST00000640552 C3orf56Q8N813 242 aa9.79□□□□□ -0.84
GFAP-237ENST00000640552 IFITM1P13164 125 aa9.79□□□□□ -0.84
GFAP-237ENST00000640552 IGLV5-39A0A0G2JS06 123 aa9.78□□□□□ -0.84
GFAP-237ENST00000640552 ATP5G1P05496 136 aa9.78□□□□□ -0.84
GFAP-237ENST00000640552 CFAP161Q6P656 301 aa9.78□□□□□ -0.84
GFAP-237ENST00000640552 KLK12Q9UKR0 248 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms