RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 Q8N2B8 174 aa10.44□□□□□ -0.74
SCARB2-221ENST00000640341 UBR5O95071 2799 aaPredicted RBP10.44□□□□□ -0.74
SCARB2-221ENST00000640341 DNAJC9-AS1A6NH13 148 aa10.44□□□□□ -0.74
SCARB2-221ENST00000640341 NDUFA1O15239 70 aa10.44□□□□□ -0.74
SCARB2-221ENST00000640341 BEAN1Q3B7T3 259 aa10.44□□□□□ -0.74
SCARB2-221ENST00000640341 EDA2RQ9HAV5 297 aa10.43□□□□□ -0.74
SCARB2-221ENST00000640341 SMIM1B2RUZ4 78 aa10.43□□□□□ -0.74
SCARB2-221ENST00000640341 SOSTDC1Q6X4U4 206 aa10.43□□□□□ -0.74
SCARB2-221ENST00000640341 TRGV4A0A0C4DH28 118 aa10.42□□□□□ -0.74
SCARB2-221ENST00000640341 TEP1Q99973 2627 aaKnown RBP10.42□□□□□ -0.74
SCARB2-221ENST00000640341 TIRAPP58753 221 aa10.42□□□□□ -0.74
SCARB2-221ENST00000640341 A8MTW9 85 aa10.41□□□□□ -0.74
SCARB2-221ENST00000640341 LST1O00453 97 aa10.41□□□□□ -0.74
SCARB2-221ENST00000640341 ZNF843Q8N446 348 aa10.41□□□□□ -0.74
SCARB2-221ENST00000640341 ESM1Q9NQ30 184 aa10.41□□□□□ -0.74
SCARB2-221ENST00000640341 DEFB130BP0DP73 79 aa10.4□□□□□ -0.74
SCARB2-221ENST00000640341 DEFB130AP0DP74 79 aa10.4□□□□□ -0.74
SCARB2-221ENST00000640341 CHCHD5Q9BSY4 110 aa10.4□□□□□ -0.74
SCARB2-221ENST00000640341 IFITM1P13164 125 aa10.4□□□□□ -0.75
SCARB2-221ENST00000640341 TMEM243Q9BU79 118 aa10.39□□□□□ -0.75
SCARB2-221ENST00000640341 CDC42SE2Q9NRR3 84 aa10.39□□□□□ -0.75
SCARB2-221ENST00000640341 A0A096LPF7 62 aa10.39□□□□□ -0.75
SCARB2-221ENST00000640341 PFN2P35080 140 aa10.39□□□□□ -0.75
SCARB2-221ENST00000640341 Q9HAA7 133 aa10.39□□□□□ -0.75
SCARB2-221ENST00000640341 LINC00158P58513 81 aa10.38□□□□□ -0.75
SCARB2-221ENST00000640341 DAZ2Q13117 558 aaKnown RBP10.38□□□□□ -0.75
SCARB2-221ENST00000640341 CLPSL2Q6UWE3 100 aa10.38□□□□□ -0.75
SCARB2-221ENST00000640341 DAZ4Q86SG3 579 aaKnown RBP10.38□□□□□ -0.75
SCARB2-221ENST00000640341 C5orf38Q86SI9 138 aa10.38□□□□□ -0.75
SCARB2-221ENST00000640341 DAZ3Q9NR90 486 aaKnown RBP10.38□□□□□ -0.75
SCARB2-221ENST00000640341 H3BT86 120 aa10.37□□□□□ -0.75
SCARB2-221ENST00000640341 IGLV5-45A0A087WSX0 123 aa10.36□□□□□ -0.75
SCARB2-221ENST00000640341 IGLV5-39A0A0G2JS06 123 aa10.36□□□□□ -0.75
SCARB2-221ENST00000640341 MIR7-3HGQ8N6C7 128 aa10.36□□□□□ -0.75
SCARB2-221ENST00000640341 CITED1Q99966 193 aa10.36□□□□□ -0.75
SCARB2-221ENST00000640341 IGLV4-60A0A075B6I1 120 aa10.36□□□□□ -0.75
SCARB2-221ENST00000640341 UNC79Q9P2D8 2635 aa10.35□□□□□ -0.75
SCARB2-221ENST00000640341 TIMM17BO60830 172 aa10.35□□□□□ -0.75
SCARB2-221ENST00000640341 NDUFV3P56181 108 aaKnown RBP10.35□□□□□ -0.75
SCARB2-221ENST00000640341 TRBV10-1A0A0K0K1A3 114 aa10.35□□□□□ -0.75
SCARB2-221ENST00000640341 C3orf56Q8N813 242 aa10.34□□□□□ -0.75
SCARB2-221ENST00000640341 OR13C6PQ8NH95 151 aa10.34□□□□□ -0.75
SCARB2-221ENST00000640341 COX7A2LO14548 114 aa10.33□□□□□ -0.76
SCARB2-221ENST00000640341 GIG44P09565 113 aaPredicted RBP10.33□□□□□ -0.76
SCARB2-221ENST00000640341 SVIPQ8NHG7 77 aa10.33□□□□□ -0.76
SCARB2-221ENST00000640341 FAM218AQ96MZ4 157 aa10.33□□□□□ -0.76
SCARB2-221ENST00000640341 F5H768 121 aa10.33□□□□□ -0.76
SCARB2-221ENST00000640341 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
SCARB2-221ENST00000640341 LINC01006Q8NI28 216 aa10.33□□□□□ -0.76
SCARB2-221ENST00000640341 CCDC179H3BU77 68 aa10.32□□□□□ -0.76
SCARB2-221ENST00000640341 M0QXV9 152 aa10.32□□□□□ -0.76
SCARB2-221ENST00000640341 CRPP02741 224 aa10.32□□□□□ -0.76
SCARB2-221ENST00000640341 NHLRC4P0CG21 123 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-221ENST00000640341 COX7B2Q8TF08 81 aa10.32□□□□□ -0.76
SCARB2-221ENST00000640341 SND1-IT1Q9HBX3 110 aa10.32□□□□□ -0.76
SCARB2-221ENST00000640341 XCL1P47992 114 aa10.31□□□□□ -0.76
SCARB2-221ENST00000640341 TRAV25A0A0B4J276 109 aa10.31□□□□□ -0.76
SCARB2-221ENST00000640341 KRTAP1-3Q8IUG1 177 aa10.31□□□□□ -0.76
SCARB2-221ENST00000640341 PAX4O43316 350 aa10.3□□□□□ -0.76
SCARB2-221ENST00000640341 ATP5G1P05496 136 aa10.3□□□□□ -0.76
SCARB2-221ENST00000640341 VWFP04275 2813 aa10.3□□□□□ -0.76
SCARB2-221ENST00000640341 C16orf74Q96GX8 76 aa10.3□□□□□ -0.76
SCARB2-221ENST00000640341 IL17DQ8TAD2 202 aa10.3□□□□□ -0.76
SCARB2-221ENST00000640341 DEFB4AO15263 64 aa10.29□□□□□ -0.76
SCARB2-221ENST00000640341 GAGE2AQ6NT46 116 aa10.29□□□□□ -0.76
SCARB2-221ENST00000640341 COPS9Q8WXC6 57 aa10.29□□□□□ -0.76
SCARB2-221ENST00000640341 LINC00337Q8N6G1 96 aa10.29□□□□□ -0.76
SCARB2-221ENST00000640341 PLAC8L1A1L4L8 177 aa10.29□□□□□ -0.76
SCARB2-221ENST00000640341 CSDC2Q9Y534 153 aaKnown RBP10.29□□□□□ -0.76
SCARB2-221ENST00000640341 DNAL4O96015 105 aa10.28□□□□□ -0.76
SCARB2-221ENST00000640341 HERV-K104P63124 156 aa10.28□□□□□ -0.76
SCARB2-221ENST00000640341 C6orf226Q5I0X4 101 aa10.28□□□□□ -0.76
SCARB2-221ENST00000640341 TRBV6-8A0A0A6YYG3 113 aa10.27□□□□□ -0.77
SCARB2-221ENST00000640341 SMIM20Q8N5G0 67 aa10.27□□□□□ -0.77
SCARB2-221ENST00000640341 SHISA2Q6UWI4 295 aa10.27□□□□□ -0.77
SCARB2-221ENST00000640341 LRRC75A-AS1Q8N1F1 130 aa10.26□□□□□ -0.77
SCARB2-221ENST00000640341 IGLV10-54A0A075B6I4 117 aa10.25□□□□□ -0.77
SCARB2-221ENST00000640341 SLPIP03973 132 aa10.25□□□□□ -0.77
SCARB2-221ENST00000640341 GYPEP15421 78 aa10.25□□□□□ -0.77
SCARB2-221ENST00000640341 SMR3AQ99954 134 aa10.25□□□□□ -0.77
SCARB2-221ENST00000640341 TRBV6-4A0A1B0GX49 114 aa10.25□□□□□ -0.77
SCARB2-221ENST00000640341 FHL2Q14192 279 aa10.25□□□□□ -0.77
SCARB2-221ENST00000640341 A0A087WYN8 130 aa10.24□□□□□ -0.77
SCARB2-221ENST00000640341 PF4P02776 101 aa10.24□□□□□ -0.77
SCARB2-221ENST00000640341 CCL18P55774 89 aa10.24□□□□□ -0.77
SCARB2-221ENST00000640341 TMEM86BQ8N661 226 aa10.24□□□□□ -0.77
SCARB2-221ENST00000640341 SMIM11BQ8TCY0 68 aa10.24□□□□□ -0.77
SCARB2-221ENST00000640341 IGKV2-28A0A075B6P5 120 aa10.24□□□□□ -0.77
SCARB2-221ENST00000640341 TRAV13-2A0A0B4J235 113 aa10.24□□□□□ -0.77
SCARB2-221ENST00000640341 FAM236AA0A1B0GUQ0 79 aa10.24□□□□□ -0.77
SCARB2-221ENST00000640341 FAM236BA0A1B0GV22 79 aa10.24□□□□□ -0.77
SCARB2-221ENST00000640341 IGKV2D-28P01615 120 aa10.24□□□□□ -0.77
SCARB2-221ENST00000640341 IGLV1-51P01701 117 aa10.23□□□□□ -0.77
SCARB2-221ENST00000640341 PRR3P79522 188 aaKnown RBP10.23□□□□□ -0.77
SCARB2-221ENST00000640341 SMCR5Q8TEV8 140 aa10.23□□□□□ -0.77
SCARB2-221ENST00000640341 LECT2O14960 151 aa10.22□□□□□ -0.77
SCARB2-221ENST00000640341 RNASE1P07998 156 aaKnown RBP10.22□□□□□ -0.77
SCARB2-221ENST00000640341 LINC00482Q8N8I6 264 aa10.22□□□□□ -0.77
SCARB2-221ENST00000640341 ATRQ13535 2644 aa10.22□□□□□ -0.77
SCARB2-221ENST00000640341 IGHV3OR16-9A0A0B4J2B5 98 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8378.1 ms