RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 TRAV10A0A0B4J240 114 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 TCL1BO95988 128 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 IGHV3-53P01767 116 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 IGLV7-43P04211 117 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 CRYGAP11844 174 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 TMEM258P61165 79 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 DEFB135Q30KP9 77 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 KHDC3LQ587J8 217 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 TMEM167AQ8TBQ9 72 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 NDUFA4O00483 81 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 CD3DP04234 171 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 GZMBP10144 247 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 HIST1H1DP16402 221 aaKnown RBP4.53□□□□□ -1.68
NECAP1-220ENST00000639841 C9orf62Q8N4C0 152 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 ST20-AS1Q8NBB2 130 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 SLC35B3Q9H1N7 401 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 DUSP21Q9H596 190 aa4.53□□□□□ -1.68
NECAP1-220ENST00000639841 MIFP14174 115 aa4.52□□□□□ -1.69
NECAP1-220ENST00000639841 S100A10P60903 97 aa4.52□□□□□ -1.69
NECAP1-220ENST00000639841 LYZL1Q6UWQ5 148 aa4.52□□□□□ -1.69
NECAP1-220ENST00000639841 OR4B1Q8NGF8 309 aa4.52□□□□□ -1.69
NECAP1-220ENST00000639841 WFDC10AQ9H1F0 79 aa4.52□□□□□ -1.69
NECAP1-220ENST00000639841 SAA1P0DJI8 122 aaPredicted RBP4.51□□□□□ -1.69
NECAP1-220ENST00000639841 COL5A1-AS1Q5SY13 56 aa4.51□□□□□ -1.69
NECAP1-220ENST00000639841 C5orf17Q8NAS9 161 aa4.51□□□□□ -1.69
NECAP1-220ENST00000639841 BET1LQ9NYM9 111 aa4.51□□□□□ -1.69
NECAP1-220ENST00000639841 XAF1Q6GPH4 301 aa4.51□□□□□ -1.69
NECAP1-220ENST00000639841 Q6ZR54 194 aa4.51□□□□□ -1.69
NECAP1-220ENST00000639841 APLNQ9ULZ1 77 aa4.51□□□□□ -1.69
NECAP1-220ENST00000639841 TRBV20-1A0A075B6N2 111 aa4.5□□□□□ -1.69
NECAP1-220ENST00000639841 TRAV12-2A0A075B6T6 113 aa4.5□□□□□ -1.69
NECAP1-220ENST00000639841 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.5□□□□□ -1.69
NECAP1-220ENST00000639841 A0A1B0GVY2 172 aa4.5□□□□□ -1.69
NECAP1-220ENST00000639841 PDCD5O14737 125 aa4.5□□□□□ -1.69
NECAP1-220ENST00000639841 TIMM17BO60830 172 aa4.5□□□□□ -1.69
NECAP1-220ENST00000639841 SLC25A4P12235 298 aa4.5□□□□□ -1.69
NECAP1-220ENST00000639841 MRGPRG-AS1Q2M3A8 158 aa4.5□□□□□ -1.69
NECAP1-220ENST00000639841 Q8NAQ8 132 aa4.5□□□□□ -1.69
NECAP1-220ENST00000639841 SEC11CQ9BY50 192 aa4.5□□□□□ -1.69
NECAP1-220ENST00000639841 RPRMQ9NS64 109 aa4.5□□□□□ -1.69
NECAP1-220ENST00000639841 TRAV7A0A075B6U4 112 aa4.49□□□□□ -1.69
NECAP1-220ENST00000639841 H3BPC8 53 aa4.49□□□□□ -1.69
NECAP1-220ENST00000639841 ZNF79Q15937 498 aa4.49□□□□□ -1.69
NECAP1-220ENST00000639841 AGPAT4-IT1Q9H0P7 198 aa4.49□□□□□ -1.69
NECAP1-220ENST00000639841 EIF4EBP1Q13541 118 aaPredicted RBP4.49□□□□□ -1.69
NECAP1-220ENST00000639841 Q6ZUT4 128 aa4.49□□□□□ -1.69
NECAP1-220ENST00000639841 KCNRGQ8N5I3 272 aa4.49□□□□□ -1.69
NECAP1-220ENST00000639841 CHCHD1Q96BP2 118 aaKnown RBP4.49□□□□□ -1.69
NECAP1-220ENST00000639841 ARHGAP5-AS1Q96IT6 56 aa4.49□□□□□ -1.69
NECAP1-220ENST00000639841 HECTD4Q9Y4D8 3996 aa4.49□□□□□ -1.69
NECAP1-220ENST00000639841 DNAH6Q9C0G6 4158 aa4.48□□□□□ -1.69
NECAP1-220ENST00000639841 A0A0D9SG52 128 aa4.48□□□□□ -1.69
NECAP1-220ENST00000639841 CTSDP07339 412 aaPredicted RBP4.48□□□□□ -1.69
NECAP1-220ENST00000639841 DPPA3Q6W0C5 159 aa4.48□□□□□ -1.69
NECAP1-220ENST00000639841 TAS2R8Q9NYW2 309 aa4.48□□□□□ -1.69
NECAP1-220ENST00000639841 C11orf86A6NJI1 115 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 PRH1P02810 166 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 TRAPPC2P0DI81 140 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 TRAPPC2BP0DI82 140 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 APELAP0DMC3 54 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 FABP4P15090 132 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 FUSP35637 526 aaKnown RBP eCLIP4.47□□□□□ -1.69
NECAP1-220ENST00000639841 DEFA5Q01523 94 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 SS18Q15532 418 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 LSM10Q969L4 123 aaKnown RBP4.47□□□□□ -1.69
NECAP1-220ENST00000639841 RETNLBQ9BQ08 111 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 DNAH10Q8IVF4 4471 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 IGLV4-69A0A075B6H9 119 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 IGKV3-20P01619 116 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 ZNF705BP0CI00 300 aaPredicted RBP4.47□□□□□ -1.69
NECAP1-220ENST00000639841 TPT1P13693 172 aaKnown RBP4.47□□□□□ -1.69
NECAP1-220ENST00000639841 MRPS36P82909 103 aaKnown RBP4.47□□□□□ -1.69
NECAP1-220ENST00000639841 ATOH7Q8N100 152 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 HYDINQ4G0P3 5121 aa4.47□□□□□ -1.69
NECAP1-220ENST00000639841 A0A1B0GU33 70 aa4.46□□□□□ -1.7
NECAP1-220ENST00000639841 TMEM235A6NFC5 223 aa4.46□□□□□ -1.7
NECAP1-220ENST00000639841 SPINK8P0C7L1 97 aa4.46□□□□□ -1.7
NECAP1-220ENST00000639841 NFYAP23511 347 aaPredicted RBP4.46□□□□□ -1.7
NECAP1-220ENST00000639841 LGALSLQ3ZCW2 172 aaPredicted RBP4.46□□□□□ -1.7
NECAP1-220ENST00000639841 C10orf55Q5SWW7 151 aa4.46□□□□□ -1.7
NECAP1-220ENST00000639841 CLEC2BQ92478 149 aa4.46□□□□□ -1.7
NECAP1-220ENST00000639841 TMEM14BQ9NUH8 114 aa4.46□□□□□ -1.7
NECAP1-220ENST00000639841 TRAV14DV4A0A0A6YYC5 116 aa4.45□□□□□ -1.7
NECAP1-220ENST00000639841 TRAV1-2A0A0B4J238 106 aa4.45□□□□□ -1.7
NECAP1-220ENST00000639841 IGLC7A0M8Q6 106 aa4.45□□□□□ -1.7
NECAP1-220ENST00000639841 Q56UQ5 140 aa4.45□□□□□ -1.7
NECAP1-220ENST00000639841 UBE2DNLQ8IWF7 75 aa4.45□□□□□ -1.7
NECAP1-220ENST00000639841 RHPN1-AS1Q9BWJ2 59 aa4.45□□□□□ -1.7
NECAP1-220ENST00000639841 DEFB131BA0A096LNP1 70 aa4.45□□□□□ -1.7
NECAP1-220ENST00000639841 TRBV10-2A0A0K0K1G8 114 aa4.45□□□□□ -1.7
NECAP1-220ENST00000639841 MRPL54Q6P161 138 aaKnown RBP4.45□□□□□ -1.7
NECAP1-220ENST00000639841 FOXI2Q6ZQN5 318 aa4.45□□□□□ -1.7
NECAP1-220ENST00000639841 Q6ZQT0 140 aa4.45□□□□□ -1.7
NECAP1-220ENST00000639841 TIMM9Q9Y5J7 89 aa4.45□□□□□ -1.7
NECAP1-220ENST00000639841 PNMA8CA0A1B0GUJ8 204 aa4.44□□□□□ -1.7
NECAP1-220ENST00000639841 A6NN06 94 aa4.44□□□□□ -1.7
NECAP1-220ENST00000639841 H7C2G1 150 aa4.44□□□□□ -1.7
NECAP1-220ENST00000639841 GNRH2O43555 120 aa4.44□□□□□ -1.7
NECAP1-220ENST00000639841 ZNF90Q03938 601 aa4.44□□□□□ -1.7
NECAP1-220ENST00000639841 C1orf134Q5TEV5 83 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms