RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 ARHGEF10O15013 1369 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 RTL9Q8NET4 1388 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 FMN2Q9NZ56 1722 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 FRYLO94915 3013 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 PTPRMP28827 1452 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 ARAP1Q96P48 1450 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 NLRP1Q9C000 1473 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 KIAA1549LQ6ZVL6 1849 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 SBF2Q86WG5 1849 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 LOC400499M0QZD8 3231 aa-0.36□□□□□ -2.47
CCDC7-211ENST00000638889 DCHS1Q96JQ0 3298 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 BCORQ6W2J9 1755 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 DLEC1Q9Y238 1755 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 PTPRGP23470 1445 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 CD109Q6YHK3 1445 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 YTHDC2Q9H6S0 1430 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 ANK1P16157 1881 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 ALKQ9UM73 1620 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 NRXN2Q9P2S2 1712 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 TRAV4A0A0B4J268 109 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 PIGBOS1A0A0B4J2F0 54 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 A0A0G2JND7 137 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 TRBV27A0A0K0K1C4 114 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 A0A1B0GWA3 101 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 RIIAD1A6NNX1 92 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 G3V2T6 193 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 H3BMG7 143 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 H3BQF6 201 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 M0QY20 66 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 M0QZK8 103 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 UQCRQO14949 82 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 CHP2O43745 196 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 PDE6DO43924 150 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 SMIM24O75264 130 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 DCTN3O75935 186 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 DPM2O94777 84 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 RBP4P02753 201 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 IL5P05113 134 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 ARMS2P0C7Q2 107 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 TRAPPC2P0DI81 140 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 TRAPPC2BP0DI82 140 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 IAPPP10997 89 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 RPL7P18124 248 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 CRYGSP22914 178 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 CBLN1P23435 193 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 SDC2P34741 201 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 MAGOHP61326 146 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 PSPHP78330 225 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 CCL8P80075 99 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 MRPS25P82663 173 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 RPL19P84098 196 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 LTC4SQ16873 150 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 RTL8BQ17RB0 113 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 RGS21Q2M5E4 152 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 PSMG4Q5JS54 123 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 CLLU1Q5K131 121 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 S100A7L2Q5SY68 101 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 CCDC122Q5T0U0 273 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 LINC01545Q5VT33 79 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 MRPL54Q6P161 138 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 DHRS4L2Q6PKH6 230 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 LINC00305Q7Z4B0 112 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 MNS1Q8NEH6 495 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 MYOZ3Q8TDC0 251 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 SPTSSAQ969W0 71 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 MAGOHBQ96A72 148 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 BORCS8Q96FH0 119 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 PAIP2Q9BPZ3 127 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 PSMG3Q9BT73 122 aaPredicted RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 RTL8AQ9BWD3 113 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 SEC11CQ9BY50 192 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 TMEM191AQ9H0A3 160 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 NXT2Q9NPJ8 142 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 OTORQ9NRC9 128 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 ARMC1Q9NVT9 282 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 USE1Q9NZ43 259 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 LAMTOR2Q9Y2Q5 125 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 LSM2Q9Y333 95 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 PRELID3BQ9Y3B1 194 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 AP4S1Q9Y587 144 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 ARL2-SNX15V9GYD0 113 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 WNK3Q9BYP7 1800 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 EIF3AQ14152 1382 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 TMEM2Q9UHN6 1383 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 PCNTO95613 3336 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 MUC3AQ02505 3323 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 FRMPD1Q5SYB0 1578 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 KDM3BQ7LBC6 1761 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 PAPPA2Q9BXP8 1791 aa-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 MYO5AQ9Y4I1 1855 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-211ENST00000638889 TECPR2O15040 1411 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 ABCC5O15440 1437 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 LRRC37A2A6NM11 1700 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 ARFGEF1Q9Y6D6 1849 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 MYH7P12883 1935 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 AKAP11Q9UKA4 1901 aa-0.38□□□□□ -2.47
CCDC7-211ENST00000638889 SZT2Q5T011 3432 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms