RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 FAM110AQ9BQ89 295 aa7.72□□□□□ -1.17
SNIP1-204ENST00000638725 WNK1Q9H4A3 2382 aa7.72□□□□□ -1.17
SNIP1-204ENST00000638725 IGKV2-28A0A075B6P5 120 aa7.71□□□□□ -1.17
SNIP1-204ENST00000638725 IGKV2D-28P01615 120 aa7.71□□□□□ -1.17
SNIP1-204ENST00000638725 RPL28P46779 137 aaKnown RBP7.71□□□□□ -1.17
SNIP1-204ENST00000638725 COX7B2Q8TF08 81 aa7.71□□□□□ -1.17
SNIP1-204ENST00000638725 TRAV13-2A0A0B4J235 113 aa7.71□□□□□ -1.18
SNIP1-204ENST00000638725 FAM222AQ5U5X8 452 aa7.71□□□□□ -1.18
SNIP1-204ENST00000638725 GAGE2AQ6NT46 116 aa7.71□□□□□ -1.18
SNIP1-204ENST00000638725 SND1-IT1Q9HBX3 110 aa7.71□□□□□ -1.18
SNIP1-204ENST00000638725 MYO9AB2RTY4 2548 aa7.71□□□□□ -1.18
SNIP1-204ENST00000638725 SDIM1Q6ZPB5 146 aa7.71□□□□□ -1.18
SNIP1-204ENST00000638725 NOTCH3Q9UM47 2321 aa7.7□□□□□ -1.18
SNIP1-204ENST00000638725 MALP21145 153 aa7.7□□□□□ -1.18
SNIP1-204ENST00000638725 TRGV2A0A075B6R0 118 aa7.7□□□□□ -1.18
SNIP1-204ENST00000638725 PF4P02776 101 aa7.7□□□□□ -1.18
SNIP1-204ENST00000638725 PPDPFQ9H3Y8 114 aa7.7□□□□□ -1.18
SNIP1-204ENST00000638725 IGLV4-60A0A075B6I1 120 aa7.69□□□□□ -1.18
SNIP1-204ENST00000638725 A0A087WYN8 130 aa7.69□□□□□ -1.18
SNIP1-204ENST00000638725 TRAV25A0A0B4J276 109 aa7.69□□□□□ -1.18
SNIP1-204ENST00000638725 LINC00158P58513 81 aa7.69□□□□□ -1.18
SNIP1-204ENST00000638725 KRTAP10-9P60411 292 aa7.69□□□□□ -1.18
SNIP1-204ENST00000638725 SMIM11BQ8TCY0 68 aa7.69□□□□□ -1.18
SNIP1-204ENST00000638725 PLAC8L1A1L4L8 177 aa7.69□□□□□ -1.18
SNIP1-204ENST00000638725 INAFM2P0DMQ5 153 aa7.69□□□□□ -1.18
SNIP1-204ENST00000638725 C9orf129Q5T035 196 aaKnown RBP7.69□□□□□ -1.18
SNIP1-204ENST00000638725 WFDC10AQ9H1F0 79 aa7.69□□□□□ -1.18
SNIP1-204ENST00000638725 GIG44P09565 113 aaPredicted RBP7.68□□□□□ -1.18
SNIP1-204ENST00000638725 PLA2G2AP14555 144 aa7.68□□□□□ -1.18
SNIP1-204ENST00000638725 ACACBO00763 2458 aa7.68□□□□□ -1.18
SNIP1-204ENST00000638725 CCL18P55774 89 aa7.68□□□□□ -1.18
SNIP1-204ENST00000638725 CHD6Q8TD26 2715 aa7.68□□□□□ -1.18
SNIP1-204ENST00000638725 TEX15Q9BXT5 2789 aa7.67□□□□□ -1.18
SNIP1-204ENST00000638725 CCL24O00175 119 aa7.67□□□□□ -1.18
SNIP1-204ENST00000638725 DNAL4O96015 105 aa7.67□□□□□ -1.18
SNIP1-204ENST00000638725 ATP5G1P05496 136 aa7.67□□□□□ -1.18
SNIP1-204ENST00000638725 PFN2P35080 140 aa7.67□□□□□ -1.18
SNIP1-204ENST00000638725 FAM208BQ5VWN6 2430 aa7.67□□□□□ -1.18
SNIP1-204ENST00000638725 TRGV4A0A0C4DH28 118 aa7.66□□□□□ -1.18
SNIP1-204ENST00000638725 RPL35AP18077 110 aaKnown RBP7.66□□□□□ -1.18
SNIP1-204ENST00000638725 C5orf38Q86SI9 138 aa7.66□□□□□ -1.18
SNIP1-204ENST00000638725 AKAP9Q99996 3911 aa7.66□□□□□ -1.18
SNIP1-204ENST00000638725 IGHV3OR16-9A0A0B4J2B5 98 aa7.66□□□□□ -1.18
SNIP1-204ENST00000638725 C16orf74Q96GX8 76 aa7.66□□□□□ -1.18
SNIP1-204ENST00000638725 C14orf132Q9NPU4 83 aa7.66□□□□□ -1.18
SNIP1-204ENST00000638725 MYO18BQ8IUG5 2567 aa7.66□□□□□ -1.18
SNIP1-204ENST00000638725 TRBV6-4A0A1B0GX49 114 aa7.65□□□□□ -1.18
SNIP1-204ENST00000638725 IGSF10Q6WRI0 2623 aa7.65□□□□□ -1.18
SNIP1-204ENST00000638725 C9orf153Q5TBE3 101 aa7.65□□□□□ -1.18
SNIP1-204ENST00000638725 C3orf22Q8N5N4 141 aa7.65□□□□□ -1.18
SNIP1-204ENST00000638725 PTPN13Q12923 2485 aa7.65□□□□□ -1.19
SNIP1-204ENST00000638725 CXCL5P42830 114 aa7.65□□□□□ -1.19
SNIP1-204ENST00000638725 TMEM126AQ9H061 195 aa7.65□□□□□ -1.19
SNIP1-204ENST00000638725 C11orf68Q9H3H3 251 aaKnown RBP7.65□□□□□ -1.19
SNIP1-204ENST00000638725 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
SNIP1-204ENST00000638725 LECT2O14960 151 aa7.64□□□□□ -1.19
SNIP1-204ENST00000638725 PRB1P04280 392 aa7.64□□□□□ -1.19
SNIP1-204ENST00000638725 OVOL2Q9BRP0 275 aa7.64□□□□□ -1.19
SNIP1-204ENST00000638725 CENPEQ02224 2701 aa7.64□□□□□ -1.19
SNIP1-204ENST00000638725 IBA57-AS1B1ANH7 110 aa7.64□□□□□ -1.19
SNIP1-204ENST00000638725 PAX4O43316 350 aa7.64□□□□□ -1.19
SNIP1-204ENST00000638725 LRRC75A-AS1Q8N1F1 130 aa7.64□□□□□ -1.19
SNIP1-204ENST00000638725 OR13C6PQ8NH95 151 aa7.64□□□□□ -1.19
SNIP1-204ENST00000638725 DNAJC9-AS1A6NH13 148 aa7.63□□□□□ -1.19
SNIP1-204ENST00000638725 DEFB113Q30KQ7 82 aa7.63□□□□□ -1.19
SNIP1-204ENST00000638725 TLN2Q9Y4G6 2542 aa7.63□□□□□ -1.19
SNIP1-204ENST00000638725 EPG5Q9HCE0 2579 aa7.63□□□□□ -1.19
SNIP1-204ENST00000638725 A0A087WZ39 114 aa7.63□□□□□ -1.19
SNIP1-204ENST00000638725 H0YGX0 51 aa7.63□□□□□ -1.19
SNIP1-204ENST00000638725 UQCRQO14949 82 aa7.63□□□□□ -1.19
SNIP1-204ENST00000638725 SLPIP03973 132 aa7.63□□□□□ -1.19
SNIP1-204ENST00000638725 FHL2Q14192 279 aa7.63□□□□□ -1.19
SNIP1-204ENST00000638725 PIEZO1Q92508 2521 aa7.63□□□□□ -1.19
SNIP1-204ENST00000638725 CACNA1AO00555 2505 aa7.62□□□□□ -1.19
SNIP1-204ENST00000638725 NAV2Q8IVL1 2488 aa7.62□□□□□ -1.19
SNIP1-204ENST00000638725 JMJD1CQ15652 2540 aa7.62□□□□□ -1.19
SNIP1-204ENST00000638725 SONP18583 2426 aaKnown RBP7.62□□□□□ -1.19
SNIP1-204ENST00000638725 ZNF469Q96JG9 3925 aaPredicted RBP7.62□□□□□ -1.19
SNIP1-204ENST00000638725 NCR3O14931 201 aa7.61□□□□□ -1.19
SNIP1-204ENST00000638725 LINC00526Q96FQ7 95 aa7.61□□□□□ -1.19
SNIP1-204ENST00000638725 IGKV3D-7A0A0C4DH55 119 aa7.61□□□□□ -1.19
SNIP1-204ENST00000638725 LINC00959A0A1B0GUT2 108 aa7.61□□□□□ -1.19
SNIP1-204ENST00000638725 CSNK1G2-AS1Q8NCQ2 148 aa7.61□□□□□ -1.19
SNIP1-204ENST00000638725 ESM1Q9NQ30 184 aa7.61□□□□□ -1.19
SNIP1-204ENST00000638725 LINC00846Q9NV44 126 aa7.61□□□□□ -1.19
SNIP1-204ENST00000638725 C19orf73Q9NVV2 129 aa7.61□□□□□ -1.19
SNIP1-204ENST00000638725 KLK5Q9Y337 293 aaPredicted RBP7.61□□□□□ -1.19
SNIP1-204ENST00000638725 ABCA12Q86UK0 2595 aa7.61□□□□□ -1.19
SNIP1-204ENST00000638725 TMEM86BQ8N661 226 aa7.6□□□□□ -1.19
SNIP1-204ENST00000638725 OBSCN-AS1Q96MR7 158 aa7.6□□□□□ -1.19
SNIP1-204ENST00000638725 HIST1H4AP62805 103 aaKnown RBP7.6□□□□□ -1.19
SNIP1-204ENST00000638725 C6orf226Q5I0X4 101 aa7.6□□□□□ -1.19
SNIP1-204ENST00000638725 C2orf48Q96LS8 159 aa7.6□□□□□ -1.19
SNIP1-204ENST00000638725 COX7CP15954 63 aa7.59□□□□□ -1.19
SNIP1-204ENST00000638725 LRRK2Q5S007 2527 aa7.59□□□□□ -1.19
SNIP1-204ENST00000638725 XCL1P47992 114 aa7.59□□□□□ -1.19
SNIP1-204ENST00000638725 KRTAP1-3Q8IUG1 177 aa7.59□□□□□ -1.19
SNIP1-204ENST00000638725 CLPSL2Q6UWE3 100 aa7.59□□□□□ -1.2
SNIP1-204ENST00000638725 SETXQ7Z333 2677 aaKnown RBP7.58□□□□□ -1.2
SNIP1-204ENST00000638725 NBPF19A0A087WUL8 3843 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms