RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 COL5A1-AS1Q5SY13 56 aa14.88□□□□□ -0.03
SCARB2-212ENST00000638663 TRAV10A0A0B4J240 114 aa14.88□□□□□ -0.03
SCARB2-212ENST00000638663 B9D2Q9BPU9 175 aa14.88□□□□□ -0.03
SCARB2-212ENST00000638663 ANGP03950 147 aaKnown RBP14.87□□□□□ -0.03
SCARB2-212ENST00000638663 LINC00269Q8N2A0 174 aa14.87□□□□□ -0.03
SCARB2-212ENST00000638663 SMIM1B2RUZ4 78 aa14.86□□□□□ -0.03
SCARB2-212ENST00000638663 GCSHP23434 173 aa14.85□□□□□ -0.03
SCARB2-212ENST00000638663 HIST1H4GQ99525 98 aa14.85□□□□□ -0.03
SCARB2-212ENST00000638663 IGLV5-39A0A0G2JS06 123 aa14.84□□□□□ -0.03
SCARB2-212ENST00000638663 ORAOV1Q8WV07 137 aa14.84□□□□□ -0.03
SCARB2-212ENST00000638663 SS18Q15532 418 aa14.84□□□□□ -0.03
SCARB2-212ENST00000638663 ESRGQ1W209 222 aa14.84□□□□□ -0.03
SCARB2-212ENST00000638663 NDUFA12Q9UI09 145 aa14.84□□□□□ -0.03
SCARB2-212ENST00000638663 A0A1B0GV90 55 aa14.83□□□□□ -0.04
SCARB2-212ENST00000638663 IGHV3OR16-9A0A0B4J2B5 98 aa14.82□□□□□ -0.04
SCARB2-212ENST00000638663 C10orf126Q8N4M7 172 aa14.82□□□□□ -0.04
SCARB2-212ENST00000638663 DNAH9Q9NYC9 4486 aa14.82□□□□□ -0.04
SCARB2-212ENST00000638663 DNHD1Q96M86 4753 aa14.82□□□□□ -0.04
SCARB2-212ENST00000638663 CCL25O15444 150 aa14.82□□□□□ -0.04
SCARB2-212ENST00000638663 XCL1P47992 114 aa14.82□□□□□ -0.04
SCARB2-212ENST00000638663 REG3AQ06141 175 aa14.82□□□□□ -0.04
SCARB2-212ENST00000638663 TAL2Q16559 108 aa14.82□□□□□ -0.04
SCARB2-212ENST00000638663 CEND1Q8N111 149 aa14.82□□□□□ -0.04
SCARB2-212ENST00000638663 ZFAND6Q6FIF0 208 aa14.81□□□□□ -0.04
SCARB2-212ENST00000638663 WFDC10BQ8IUB3 73 aa14.81□□□□□ -0.04
SCARB2-212ENST00000638663 K7EP13 123 aa14.8□□□□□ -0.04
SCARB2-212ENST00000638663 FXYD2P54710 66 aa14.8□□□□□ -0.04
SCARB2-212ENST00000638663 IGHV3-30P01768 117 aa14.8□□□□□ -0.04
SCARB2-212ENST00000638663 IGHV3-33P01772 117 aa14.8□□□□□ -0.04
SCARB2-212ENST00000638663 IGHV3-30-5P0DP03 117 aa14.8□□□□□ -0.04
SCARB2-212ENST00000638663 C5orf38Q86SI9 138 aa14.8□□□□□ -0.04
SCARB2-212ENST00000638663 A0A0J9YXY3 114 aa14.79□□□□□ -0.04
SCARB2-212ENST00000638663 SRSF9Q13242 221 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCARB2-212ENST00000638663 TM2D2Q9BX73 214 aa14.78□□□□□ -0.04
SCARB2-212ENST00000638663 KLK12Q9UKR0 248 aa14.78□□□□□ -0.04
SCARB2-212ENST00000638663 IGLV10-54A0A075B6I4 117 aa14.78□□□□□ -0.04
SCARB2-212ENST00000638663 A0A087WZ39 114 aa14.77□□□□□ -0.04
SCARB2-212ENST00000638663 PTTG1IPP53801 180 aa14.77□□□□□ -0.04
SCARB2-212ENST00000638663 C15orf53Q8NAA6 179 aa14.77□□□□□ -0.04
SCARB2-212ENST00000638663 COL7A1Q02388 2944 aa14.76□□□□□ -0.05
SCARB2-212ENST00000638663 A6NDN8 102 aa14.76□□□□□ -0.05
SCARB2-212ENST00000638663 NDUFA1O15239 70 aa14.76□□□□□ -0.05
SCARB2-212ENST00000638663 Q6ZVH6 145 aa14.76□□□□□ -0.05
SCARB2-212ENST00000638663 CHCHD10Q8WYQ3 142 aaPredicted RBP14.76□□□□□ -0.05
SCARB2-212ENST00000638663 SPANXB1Q9NS25 103 aaPredicted RBP14.76□□□□□ -0.05
SCARB2-212ENST00000638663 STAB2Q8WWQ8 2551 aa14.75□□□□□ -0.05
SCARB2-212ENST00000638663 KRTAP21-3Q3LHN1 58 aa14.75□□□□□ -0.05
SCARB2-212ENST00000638663 Q9H8V8 135 aa14.75□□□□□ -0.05
SCARB2-212ENST00000638663 IGLL5B9A064 214 aa14.74□□□□□ -0.05
SCARB2-212ENST00000638663 PRR34Q9NV39 138 aa14.74□□□□□ -0.05
SCARB2-212ENST00000638663 TOMM7Q9P0U1 55 aa14.74□□□□□ -0.05
SCARB2-212ENST00000638663 CD164L2Q6UWJ8 174 aa14.73□□□□□ -0.05
SCARB2-212ENST00000638663 COX7B2Q8TF08 81 aa14.73□□□□□ -0.05
SCARB2-212ENST00000638663 TAX1BP3O14907 124 aa14.72□□□□□ -0.05
SCARB2-212ENST00000638663 ENHOQ6UWT2 76 aa14.72□□□□□ -0.05
SCARB2-212ENST00000638663 TMEM238C9JI98 176 aa14.72□□□□□ -0.05
SCARB2-212ENST00000638663 ZNF625Q96I27 306 aaPredicted RBP14.71□□□□□ -0.05
SCARB2-212ENST00000638663 LITAFQ99732 161 aa14.71□□□□□ -0.05
SCARB2-212ENST00000638663 NHP2Q9NX24 153 aaKnown RBP14.71□□□□□ -0.05
SCARB2-212ENST00000638663 NHLRC4P0CG21 123 aaPredicted RBP14.7□□□□□ -0.06
SCARB2-212ENST00000638663 UBE2WQ96B02 151 aa14.7□□□□□ -0.06
SCARB2-212ENST00000638663 CRPP02741 224 aa14.7□□□□□ -0.06
SCARB2-212ENST00000638663 K7ERJ3 54 aa14.68□□□□□ -0.06
SCARB2-212ENST00000638663 COX7A2LO14548 114 aa14.68□□□□□ -0.06
SCARB2-212ENST00000638663 ADAMTSL4-AS1Q5T5F5 129 aa14.68□□□□□ -0.06
SCARB2-212ENST00000638663 SMIM13P0DJ93 91 aa14.68□□□□□ -0.06
SCARB2-212ENST00000638663 FOXI1Q12951 378 aa14.68□□□□□ -0.06
SCARB2-212ENST00000638663 RAB37Q96AX2 223 aa14.68□□□□□ -0.06
SCARB2-212ENST00000638663 LINC00588Q9Y4M8 146 aa14.68□□□□□ -0.06
SCARB2-212ENST00000638663 GAGE12HA6NDE8 117 aa14.67□□□□□ -0.06
SCARB2-212ENST00000638663 COX11Q9Y6N1 276 aa14.67□□□□□ -0.06
SCARB2-212ENST00000638663 LINC01556Q5JQF7 62 aa14.66□□□□□ -0.06
SCARB2-212ENST00000638663 LINC01561Q8N1V8 128 aa14.66□□□□□ -0.06
SCARB2-212ENST00000638663 TIMM17BO60830 172 aa14.65□□□□□ -0.06
SCARB2-212ENST00000638663 MALP21145 153 aa14.65□□□□□ -0.06
SCARB2-212ENST00000638663 CCL18P55774 89 aa14.65□□□□□ -0.06
SCARB2-212ENST00000638663 MUSTN1Q8IVN3 82 aa14.65□□□□□ -0.06
SCARB2-212ENST00000638663 TMEM238LA0A1B0GVL6 79 aa14.64□□□□□ -0.07
SCARB2-212ENST00000638663 A6NJY4 79 aa14.64□□□□□ -0.07
SCARB2-212ENST00000638663 PRSS2P07478 247 aa14.64□□□□□ -0.07
SCARB2-212ENST00000638663 HERV-K104P63124 156 aa14.64□□□□□ -0.07
SCARB2-212ENST00000638663 A0A0U1RRA0 63 aa14.64□□□□□ -0.07
SCARB2-212ENST00000638663 SPANXDQ9BXN6 97 aa14.64□□□□□ -0.07
SCARB2-212ENST00000638663 SPANXCQ9NY87 97 aa14.64□□□□□ -0.07
SCARB2-212ENST00000638663 MEGF8Q7Z7M0 2845 aa14.63□□□□□ -0.07
SCARB2-212ENST00000638663 TRAV8-4A0A0B4J246 113 aa14.63□□□□□ -0.07
SCARB2-212ENST00000638663 CIRBPQ14011 172 aaKnown RBP14.63□□□□□ -0.07
SCARB2-212ENST00000638663 C6orf226Q5I0X4 101 aa14.63□□□□□ -0.07
SCARB2-212ENST00000638663 MEIG1Q5JSS6 88 aa14.63□□□□□ -0.07
SCARB2-212ENST00000638663 DAND5Q8N907 189 aa14.63□□□□□ -0.07
SCARB2-212ENST00000638663 MIAQ16674 131 aa14.62□□□□□ -0.07
SCARB2-212ENST00000638663 DNAH10OSP0CZ25 163 aa14.62□□□□□ -0.07
SCARB2-212ENST00000638663 NPC2P61916 151 aa14.62□□□□□ -0.07
SCARB2-212ENST00000638663 Q8IZM0 81 aa14.61□□□□□ -0.07
SCARB2-212ENST00000638663 NAA38Q9BRA0 125 aaKnown RBP14.61□□□□□ -0.07
SCARB2-212ENST00000638663 A0A1B0GWB2 263 aa14.6□□□□□ -0.07
SCARB2-212ENST00000638663 PRKDCP78527 4128 aaKnown RBP14.6□□□□□ -0.07
SCARB2-212ENST00000638663 A4D1N5 150 aa14.6□□□□□ -0.07
SCARB2-212ENST00000638663 RPL24P83731 157 aaKnown RBP14.6□□□□□ -0.07
SCARB2-212ENST00000638663 C9orf118A6NHY6 69 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms