RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 TMEM254Q8TBM7 123 aa11.3□□□□□ -0.6
UBE3A-227ENST00000638011 CRYGAP11844 174 aa11.3□□□□□ -0.6
UBE3A-227ENST00000638011 COL27A1Q8IZC6 1860 aaPredicted RBP11.3□□□□□ -0.6
UBE3A-227ENST00000638011 Q8N814 137 aa11.3□□□□□ -0.6
UBE3A-227ENST00000638011 SPAG11AQ6PDA7 123 aa11.29□□□□□ -0.6
UBE3A-227ENST00000638011 A0A1B0GW54 56 aa11.29□□□□□ -0.6
UBE3A-227ENST00000638011 FSTL3O95633 263 aa11.29□□□□□ -0.6
UBE3A-227ENST00000638011 SOSTDC1Q6X4U4 206 aa11.29□□□□□ -0.6
UBE3A-227ENST00000638011 LINC00322Q6ZN03 302 aaPredicted RBP11.29□□□□□ -0.6
UBE3A-227ENST00000638011 DEFB135Q30KP9 77 aa11.28□□□□□ -0.6
UBE3A-227ENST00000638011 C22orf34Q6ZV56 151 aa11.28□□□□□ -0.6
UBE3A-227ENST00000638011 ODF3L1Q8IXM7 274 aa11.28□□□□□ -0.6
UBE3A-227ENST00000638011 SMAD5-AS1Q9Y6J3 95 aa11.28□□□□□ -0.6
UBE3A-227ENST00000638011 A0A0J9YWU9 116 aa11.28□□□□□ -0.6
UBE3A-227ENST00000638011 LINC00208Q96KT6 92 aa11.28□□□□□ -0.6
UBE3A-227ENST00000638011 ZNF80P51504 273 aaPredicted RBP11.28□□□□□ -0.6
UBE3A-227ENST00000638011 MAP6D1Q9H9H5 199 aa11.27□□□□□ -0.6
UBE3A-227ENST00000638011 SYCNQ0VAF6 134 aa11.27□□□□□ -0.61
UBE3A-227ENST00000638011 IGHV4-30-2A0A087WSY4 118 aa11.27□□□□□ -0.61
UBE3A-227ENST00000638011 F8WDY8 70 aa11.27□□□□□ -0.61
UBE3A-227ENST00000638011 SPRY2O43597 315 aa11.27□□□□□ -0.61
UBE3A-227ENST00000638011 IGF1P05019 195 aa11.27□□□□□ -0.61
UBE3A-227ENST00000638011 C8orf87E5RJ46 101 aa11.26□□□□□ -0.61
UBE3A-227ENST00000638011 CEMP1Q6PRD7 247 aaPredicted RBP11.26□□□□□ -0.61
UBE3A-227ENST00000638011 FRMD6-AS1P0C7T7 363 aa11.26□□□□□ -0.61
UBE3A-227ENST00000638011 BPTFQ12830 3046 aa11.25□□□□□ -0.61
UBE3A-227ENST00000638011 PRR4Q16378 134 aa11.25□□□□□ -0.61
UBE3A-227ENST00000638011 FAM215AQ9Y5M1 114 aa11.25□□□□□ -0.61
UBE3A-227ENST00000638011 Q8N6K4 173 aa11.25□□□□□ -0.61
UBE3A-227ENST00000638011 RITA1Q96K30 269 aa11.25□□□□□ -0.61
UBE3A-227ENST00000638011 C11orf45Q8TAV5 145 aa11.25□□□□□ -0.61
UBE3A-227ENST00000638011 PLAC8L1A1L4L8 177 aa11.24□□□□□ -0.61
UBE3A-227ENST00000638011 IGLV4-69A0A075B6H9 119 aa11.24□□□□□ -0.61
UBE3A-227ENST00000638011 TP53AIP1Q9HCN2 124 aa11.24□□□□□ -0.61
UBE3A-227ENST00000638011 TP53TG3Q9ULZ0 132 aa11.24□□□□□ -0.61
UBE3A-227ENST00000638011 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
UBE3A-227ENST00000638011 LY6LH3BQJ8 138 aa11.23□□□□□ -0.61
UBE3A-227ENST00000638011 CR1P17927 2039 aa11.22□□□□□ -0.61
UBE3A-227ENST00000638011 H0Y9P7 68 aa11.21□□□□□ -0.61
UBE3A-227ENST00000638011 TSHBP01222 138 aa11.21□□□□□ -0.61
UBE3A-227ENST00000638011 HILS1P60008 231 aa11.21□□□□□ -0.62
UBE3A-227ENST00000638011 C1orf137Q5JT78 98 aa11.21□□□□□ -0.62
UBE3A-227ENST00000638011 K7EQG2 157 aa11.2□□□□□ -0.62
UBE3A-227ENST00000638011 EPG5Q9HCE0 2579 aa11.2□□□□□ -0.62
UBE3A-227ENST00000638011 LINC01547P58512 204 aaPredicted RBP11.2□□□□□ -0.62
UBE3A-227ENST00000638011 IGF2-ASQ6U949 168 aa11.19□□□□□ -0.62
UBE3A-227ENST00000638011 UNQ9165/PRO28630Q6UXU0 137 aa11.19□□□□□ -0.62
UBE3A-227ENST00000638011 HCG22E2RYF7 251 aa11.19□□□□□ -0.62
UBE3A-227ENST00000638011 E7EUB6 86 aa11.18□□□□□ -0.62
UBE3A-227ENST00000638011 Q6ZTI0 123 aa11.18□□□□□ -0.62
UBE3A-227ENST00000638011 XAGE1AQ9HD64 81 aa11.18□□□□□ -0.62
UBE3A-227ENST00000638011 H3BPC8 53 aa11.17□□□□□ -0.62
UBE3A-227ENST00000638011 IGKV2-28A0A075B6P5 120 aa11.17□□□□□ -0.62
UBE3A-227ENST00000638011 IGKV2D-28P01615 120 aa11.17□□□□□ -0.62
UBE3A-227ENST00000638011 POLR2KP53803 58 aaKnown RBP11.17□□□□□ -0.62
UBE3A-227ENST00000638011 IGHV4-38-2P0DP08 117 aa11.17□□□□□ -0.62
UBE3A-227ENST00000638011 DEFB113Q30KQ7 82 aa11.17□□□□□ -0.62
UBE3A-227ENST00000638011 IGLV2-11P01706 119 aa11.16□□□□□ -0.62
UBE3A-227ENST00000638011 LELP1Q5T871 98 aa11.16□□□□□ -0.62
UBE3A-227ENST00000638011 LRCOL1A6NCL2 159 aa11.16□□□□□ -0.62
UBE3A-227ENST00000638011 KLLNB2CW77 178 aa11.15□□□□□ -0.63
UBE3A-227ENST00000638011 IGFL2Q6UWQ7 119 aa11.15□□□□□ -0.63
UBE3A-227ENST00000638011 CHCHD7Q9BUK0 85 aa11.15□□□□□ -0.63
UBE3A-227ENST00000638011 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.14□□□□□ -0.63
UBE3A-227ENST00000638011 MAPK1IP1LQ8NDC0 245 aa11.14□□□□□ -0.63
UBE3A-227ENST00000638011 DCANP1Q8TF63 244 aa11.14□□□□□ -0.63
UBE3A-227ENST00000638011 CRIP1P50238 77 aa11.14□□□□□ -0.63
UBE3A-227ENST00000638011 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
UBE3A-227ENST00000638011 PPDPFQ9H3Y8 114 aa11.14□□□□□ -0.63
UBE3A-227ENST00000638011 IGIPA6NJ69 53 aa11.13□□□□□ -0.63
UBE3A-227ENST00000638011 A0A096LNI7 61 aa11.13□□□□□ -0.63
UBE3A-227ENST00000638011 PRM2P04554 102 aa11.13□□□□□ -0.63
UBE3A-227ENST00000638011 A0A1B0GU69 56 aa11.13□□□□□ -0.63
UBE3A-227ENST00000638011 Q6ZS46 218 aa11.12□□□□□ -0.63
UBE3A-227ENST00000638011 ODF3BA8MYP8 253 aa11.12□□□□□ -0.63
UBE3A-227ENST00000638011 ACYP2P14621 99 aa11.12□□□□□ -0.63
UBE3A-227ENST00000638011 IGHV4-30-4P0DP06 118 aa11.12□□□□□ -0.63
UBE3A-227ENST00000638011 IGHV4-31P0DP07 118 aa11.12□□□□□ -0.63
UBE3A-227ENST00000638011 EGFEM1PQ0D2K5 195 aa11.11□□□□□ -0.63
UBE3A-227ENST00000638011 LINC00575Q6W349 94 aa11.11□□□□□ -0.63
UBE3A-227ENST00000638011 RETNLBQ9BQ08 111 aa11.11□□□□□ -0.63
UBE3A-227ENST00000638011 LINC01561Q8N1V8 128 aa11.1□□□□□ -0.63
UBE3A-227ENST00000638011 IGHV4-61A0A0C4DH41 118 aa11.1□□□□□ -0.63
UBE3A-227ENST00000638011 FBXL19-AS1Q494R0 122 aa11.1□□□□□ -0.63
UBE3A-227ENST00000638011 TNFRSF13BO14836 293 aaPredicted RBP11.1□□□□□ -0.63
UBE3A-227ENST00000638011 REG3GQ6UW15 175 aa11.09□□□□□ -0.63
UBE3A-227ENST00000638011 DEFB131BA0A096LNP1 70 aa11.09□□□□□ -0.63
UBE3A-227ENST00000638011 DAZAP2Q15038 168 aaPredicted RBP11.09□□□□□ -0.63
UBE3A-227ENST00000638011 CDC42SE2Q9NRR3 84 aa11.09□□□□□ -0.63
UBE3A-227ENST00000638011 SHISA2Q6UWI4 295 aa11.09□□□□□ -0.63
UBE3A-227ENST00000638011 LINC00959A0A1B0GUT2 108 aa11.09□□□□□ -0.63
UBE3A-227ENST00000638011 DEFB114Q30KQ6 69 aa11.08□□□□□ -0.64
UBE3A-227ENST00000638011 LOC100131303A0A0U1RQF7 123 aa11.08□□□□□ -0.64
UBE3A-227ENST00000638011 RNASE3P12724 160 aaKnown RBP11.08□□□□□ -0.64
UBE3A-227ENST00000638011 CYP4F30PQ9H0H9 118 aa11.08□□□□□ -0.64
UBE3A-227ENST00000638011 A6NDX4 124 aa11.07□□□□□ -0.64
UBE3A-227ENST00000638011 ZNF295-AS1Q8N0V1 137 aa11.07□□□□□ -0.64
UBE3A-227ENST00000638011 Q8N7P7 452 aa11.07□□□□□ -0.64
UBE3A-227ENST00000638011 LY6G6EA0A0G2JKS1 128 aa11.07□□□□□ -0.64
UBE3A-227ENST00000638011 U3KQA8 63 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms