RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 A0A087WTM6 91 aa1.35□□□□□ -2.19
GABRB3-223ENST00000637293 A0A1B0GUT8 65 aa1.35□□□□□ -2.19
GABRB3-223ENST00000637293 NDUFB1O75438 58 aa1.35□□□□□ -2.19
GABRB3-223ENST00000637293 GNG13Q9P2W3 67 aa1.35□□□□□ -2.19
GABRB3-223ENST00000637293 ABCA6Q8N139 1617 aa1.35□□□□□ -2.19
GABRB3-223ENST00000637293 RAPGEF6Q8TEU7 1601 aa1.35□□□□□ -2.19
GABRB3-223ENST00000637293 ATP7BP35670 1465 aa1.35□□□□□ -2.19
GABRB3-223ENST00000637293 RALGAPBQ86X10 1494 aa1.35□□□□□ -2.19
GABRB3-223ENST00000637293 NUP188Q5SRE5 1749 aa1.35□□□□□ -2.19
GABRB3-223ENST00000637293 CRYBG1Q9Y4K1 1723 aa1.35□□□□□ -2.19
GABRB3-223ENST00000637293 PIK3C2BO00750 1634 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 ALKQ9UM73 1620 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.34□□□□□ -2.19
GABRB3-223ENST00000637293 A0A087WVE0 104 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 TRAV1-2A0A0B4J238 106 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 C10orf142B7Z368 130 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 H3BVH4 76 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 M0R3E3 92 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 C3orf79P0CE67 100 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 HMGA1P17096 107 aaKnown RBP1.34□□□□□ -2.19
GABRB3-223ENST00000637293 ZNF137PP52743 207 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 PP632Q6XCG6 107 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 LINC00208Q96KT6 92 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 FANCD2Q9BXW9 1451 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 SHPRHQ149N8 1683 aa1.34□□□□□ -2.19
GABRB3-223ENST00000637293 MDC1Q14676 2089 aaKnown RBP1.34□□□□□ -2.19
GABRB3-223ENST00000637293 SHANK1Q9Y566 2161 aa1.34□□□□□ -2.2
GABRB3-223ENST00000637293 PCDH15Q96QU1 1955 aa1.34□□□□□ -2.2
GABRB3-223ENST00000637293 TNRC6BQ9UPQ9 1833 aaKnown RBP1.33□□□□□ -2.2
GABRB3-223ENST00000637293 RNF17Q9BXT8 1623 aaKnown RBP1.33□□□□□ -2.2
GABRB3-223ENST00000637293 CFAP43Q8NDM7 1665 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 PRRC2AP48634 2157 aaKnown RBP1.33□□□□□ -2.2
GABRB3-223ENST00000637293 A0A0D9SFI3 127 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 TRBV7-4A0A0J9YYF1 115 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 H0Y9P7 68 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 HCRTO43612 131 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 ACYP2P14621 99 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 ATXN8Q156A1 80 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 Q6ZRN7 208 aaPredicted RBP1.33□□□□□ -2.2
GABRB3-223ENST00000637293 SPRR4Q96PI1 79 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 KRTAP2-2Q9BYT5 123 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 HILPDAQ9Y5L2 63 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 CDC42BPGQ6DT37 1551 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 TET1Q8NFU7 2136 aa1.33□□□□□ -2.2
GABRB3-223ENST00000637293 NHSQ6T4R5 1651 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 ANKRD50Q9ULJ7 1429 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 XRN1Q8IZH2 1706 aaKnown RBP1.32□□□□□ -2.2
GABRB3-223ENST00000637293 ABCA4P78363 2273 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 SYCP2Q9BX26 1530 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 MAP2P11137 1827 aaKnown RBP1.32□□□□□ -2.2
GABRB3-223ENST00000637293 TRGV1A0A0A0MS02 117 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 IGKV4-1P06312 121 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 C10orf99Q6UWK7 81 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 TMEM263Q8WUH6 116 aaKnown RBP1.32□□□□□ -2.2
GABRB3-223ENST00000637293 Q96NJ1 140 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 CCL19Q99731 98 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 PROK2Q9HC23 129 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 MAST1Q9Y2H9 1570 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 PAPPAQ13219 1627 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 USP32Q8NFA0 1604 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 CICQ96RK0 1608 aaPredicted RBP1.32□□□□□ -2.2
GABRB3-223ENST00000637293 PHRF1Q9P1Y6 1649 aaKnown RBP1.32□□□□□ -2.2
GABRB3-223ENST00000637293 C5P01031 1676 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 PREX1Q8TCU6 1659 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 PKD1L3Q7Z443 1732 aa1.32□□□□□ -2.2
GABRB3-223ENST00000637293 FN1P02751 2386 aaKnown RBP1.32□□□□□ -2.2
GABRB3-223ENST00000637293 PRXQ9BXM0 1461 aa1.31□□□□□ -2.2
GABRB3-223ENST00000637293 CD163L1Q9NR16 1453 aa1.31□□□□□ -2.2
GABRB3-223ENST00000637293 FREM1Q5H8C1 2179 aa1.31□□□□□ -2.2
GABRB3-223ENST00000637293 CLASP1Q7Z460 1538 aa1.31□□□□□ -2.2
GABRB3-223ENST00000637293 CEP170BQ9Y4F5 1589 aaPredicted RBP1.31□□□□□ -2.2
GABRB3-223ENST00000637293 J3QRE1 110 aa1.31□□□□□ -2.2
GABRB3-223ENST00000637293 KRTAP10-9P60411 292 aa1.31□□□□□ -2.2
GABRB3-223ENST00000637293 DEFB107AQ8IZN7 70 aa1.31□□□□□ -2.2
GABRB3-223ENST00000637293 FDCSPQ8NFU4 85 aa1.31□□□□□ -2.2
GABRB3-223ENST00000637293 PLAC8Q9NZF1 115 aa1.31□□□□□ -2.2
GABRB3-223ENST00000637293 LRRC37A2A6NM11 1700 aa1.31□□□□□ -2.2
GABRB3-223ENST00000637293 MYO7BQ6PIF6 2116 aa1.31□□□□□ -2.2
GABRB3-223ENST00000637293 ANKRD36A6QL64 1941 aa1.3□□□□□ -2.2
GABRB3-223ENST00000637293 VWDEQ8N2E2 1590 aa1.3□□□□□ -2.2
GABRB3-223ENST00000637293 DOCK10Q96BY6 2186 aa1.3□□□□□ -2.2
GABRB3-223ENST00000637293 IFT172Q9UG01 1749 aa1.3□□□□□ -2.2
GABRB3-223ENST00000637293 SPATA8Q6RVD6 105 aa1.3□□□□□ -2.2
GABRB3-223ENST00000637293 UNQ6190/PRO20217Q6UXQ8 127 aa1.3□□□□□ -2.2
GABRB3-223ENST00000637293 ALS2Q96Q42 1657 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 FXYD6-FXYD2A0A087WZ82 144 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 TRBV30A0A0K0K1B3 111 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 SNRPGP15A8MWD9 76 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 SPINK13Q1W4C9 94 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 LCE1FQ5T754 118 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 C10orf113Q5VZT2 155 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 LINC00575Q6W349 94 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 SMIM11BQ8TCY0 68 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 ZMYM4Q5VZL5 1548 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 WIZO95785 1651 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 COL4A1P02462 1669 aa1.29□□□□□ -2.2
GABRB3-223ENST00000637293 TRBV6-1A0A0K0K1D8 114 aa1.28□□□□□ -2.2
GABRB3-223ENST00000637293 NCR3O14931 201 aa1.28□□□□□ -2.2
GABRB3-223ENST00000637293 PIN1P1O15428 100 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms