RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 IMUPQ9GZP8 106 aa15.24■□□□□ 0.03
CLN5-215ENST00000636767 TEX15Q9BXT5 2789 aa15.23■□□□□ 0.03
CLN5-215ENST00000636767 TRAV13-2A0A0B4J235 113 aa15.23■□□□□ 0.03
CLN5-215ENST00000636767 A0A1W2PRX2 142 aa15.23■□□□□ 0.03
CLN5-215ENST00000636767 RPL28P46779 137 aaKnown RBP15.23■□□□□ 0.03
CLN5-215ENST00000636767 KRTAP10-9P60411 292 aa15.23■□□□□ 0.03
CLN5-215ENST00000636767 MIR7-3HGQ8N6C7 128 aa15.23■□□□□ 0.03
CLN5-215ENST00000636767 LINC00337Q8N6G1 96 aa15.23■□□□□ 0.03
CLN5-215ENST00000636767 COX7B2Q8TF08 81 aa15.23■□□□□ 0.03
CLN5-215ENST00000636767 AKAP9Q99996 3911 aa15.23■□□□□ 0.03
CLN5-215ENST00000636767 CRPP02741 224 aa15.22■□□□□ 0.03
CLN5-215ENST00000636767 PF4P02776 101 aa15.22■□□□□ 0.03
CLN5-215ENST00000636767 CHD6Q8TD26 2715 aa15.22■□□□□ 0.03
CLN5-215ENST00000636767 FAM236AA0A1B0GUQ0 79 aa15.22■□□□□ 0.03
CLN5-215ENST00000636767 FAM236BA0A1B0GV22 79 aa15.22■□□□□ 0.03
CLN5-215ENST00000636767 SDIM1Q6ZPB5 146 aa15.22■□□□□ 0.03
CLN5-215ENST00000636767 LINC00643Q86TS7 51 aa15.22■□□□□ 0.03
CLN5-215ENST00000636767 LRRK2Q5S007 2527 aa15.22■□□□□ 0.03
CLN5-215ENST00000636767 IGKV2-28A0A075B6P5 120 aa15.21■□□□□ 0.03
CLN5-215ENST00000636767 PLAC8L1A1L4L8 177 aa15.21■□□□□ 0.03
CLN5-215ENST00000636767 IGKV2D-28P01615 120 aa15.21■□□□□ 0.03
CLN5-215ENST00000636767 Q9HAA7 133 aa15.21■□□□□ 0.03
CLN5-215ENST00000636767 FAM208BQ5VWN6 2430 aa15.21■□□□□ 0.03
CLN5-215ENST00000636767 UBR5O95071 2799 aaPredicted RBP15.21■□□□□ 0.03
CLN5-215ENST00000636767 GIG44P09565 113 aaPredicted RBP15.21■□□□□ 0.03
CLN5-215ENST00000636767 WNK1Q9H4A3 2382 aa15.2■□□□□ 0.02
CLN5-215ENST00000636767 TOMM7Q9P0U1 55 aa15.2■□□□□ 0.02
CLN5-215ENST00000636767 CCL24O00175 119 aa15.19■□□□□ 0.02
CLN5-215ENST00000636767 SND1-IT1Q9HBX3 110 aa15.19■□□□□ 0.02
CLN5-215ENST00000636767 NBPF19A0A087WUL8 3843 aa15.18■□□□□ 0.02
CLN5-215ENST00000636767 TRGV2A0A075B6R0 118 aa15.18■□□□□ 0.02
CLN5-215ENST00000636767 C2CD3Q4AC94 2353 aa15.18■□□□□ 0.02
CLN5-215ENST00000636767 IGKV3OR2-268A0A0C4DH90 116 aa15.18■□□□□ 0.02
CLN5-215ENST00000636767 MALP21145 153 aa15.18■□□□□ 0.02
CLN5-215ENST00000636767 DEFB113Q30KQ7 82 aa15.17■□□□□ 0.02
CLN5-215ENST00000636767 C16orf74Q96GX8 76 aa15.17■□□□□ 0.02
CLN5-215ENST00000636767 TRBV6-4A0A1B0GX49 114 aa15.17■□□□□ 0.02
CLN5-215ENST00000636767 INAFM2P0DMQ5 153 aa15.17■□□□□ 0.02
CLN5-215ENST00000636767 PTPN13Q12923 2485 aa15.16■□□□□ 0.02
CLN5-215ENST00000636767 NOTCH3Q9UM47 2321 aa15.16■□□□□ 0.02
CLN5-215ENST00000636767 IGLV4-60A0A075B6I1 120 aa15.16■□□□□ 0.02
CLN5-215ENST00000636767 WFDC10AQ9H1F0 79 aa15.16■□□□□ 0.02
CLN5-215ENST00000636767 LINC00158P58513 81 aa15.15■□□□□ 0.02
CLN5-215ENST00000636767 TMEM86BQ8N661 226 aa15.15■□□□□ 0.02
CLN5-215ENST00000636767 SMIM11BQ8TCY0 68 aa15.15■□□□□ 0.02
CLN5-215ENST00000636767 A0A087WYN8 130 aa15.14■□□□□ 0.01
CLN5-215ENST00000636767 IGHV3OR16-9A0A0B4J2B5 98 aa15.14■□□□□ 0.01
CLN5-215ENST00000636767 CCL18P55774 89 aa15.14■□□□□ 0.01
CLN5-215ENST00000636767 GAGE2AQ6NT46 116 aa15.14■□□□□ 0.01
CLN5-215ENST00000636767 CUBNO60494 3623 aa15.14■□□□□ 0.01
CLN5-215ENST00000636767 NAV2Q8IVL1 2488 aa15.13■□□□□ 0.01
CLN5-215ENST00000636767 DNAJC9-AS1A6NH13 148 aa15.13■□□□□ 0.01
CLN5-215ENST00000636767 TRGV4A0A0C4DH28 118 aa15.12■□□□□ 0.01
CLN5-215ENST00000636767 OVOL2Q9BRP0 275 aa15.12■□□□□ 0.01
CLN5-215ENST00000636767 RPL35AP18077 110 aaKnown RBP15.12■□□□□ 0.01
CLN5-215ENST00000636767 ZNF843Q8N446 348 aa15.12■□□□□ 0.01
CLN5-215ENST00000636767 TRBV6-8A0A0A6YYG3 113 aa15.11■□□□□ 0.01
CLN5-215ENST00000636767 PLA2G2AP14555 144 aa15.11■□□□□ 0.01
CLN5-215ENST00000636767 C3orf56Q8N813 242 aa15.11■□□□□ 0.01
CLN5-215ENST00000636767 C9orf129Q5T035 196 aaKnown RBP15.1■□□□□ 0.01
CLN5-215ENST00000636767 SMIM20Q8N5G0 67 aa15.1■□□□□ 0.01
CLN5-215ENST00000636767 IBA57-AS1B1ANH7 110 aa15.1■□□□□ 0.01
CLN5-215ENST00000636767 DNAL4O96015 105 aa15.1■□□□□ 0.01
CLN5-215ENST00000636767 C5orf38Q86SI9 138 aa15.1■□□□□ 0.01
CLN5-215ENST00000636767 LRRC75A-AS1Q8N1F1 130 aa15.1■□□□□ 0.01
CLN5-215ENST00000636767 ABCA12Q86UK0 2595 aa15.1■□□□□ 0.01
CLN5-215ENST00000636767 ZNF469Q96JG9 3925 aaPredicted RBP15.1■□□□□ 0.01
CLN5-215ENST00000636767 A0A087WZ39 114 aa15.09■□□□□ 0.01
CLN5-215ENST00000636767 KRTAP1-3Q8IUG1 177 aa15.09■□□□□ 0.01
CLN5-215ENST00000636767 CXCL5P42830 114 aa15.09■□□□□ 0.01
CLN5-215ENST00000636767 CSNK1G2-AS1Q8NCQ2 148 aa15.09■□□□□ 0.01
CLN5-215ENST00000636767 TLN2Q9Y4G6 2542 aa15.08■□□□□ 0
CLN5-215ENST00000636767 FHL2Q14192 279 aa15.08■□□□□ 0
CLN5-215ENST00000636767 PFN2P35080 140 aa15.07■□□□□ 0
CLN5-215ENST00000636767 ESM1Q9NQ30 184 aa15.07■□□□□ 0
CLN5-215ENST00000636767 C19orf73Q9NVV2 129 aa15.07■□□□□ 0
CLN5-215ENST00000636767 SETXQ7Z333 2677 aaKnown RBP15.07■□□□□ 0
CLN5-215ENST00000636767 H0YGX0 51 aa15.06■□□□□ 0
CLN5-215ENST00000636767 JMJD1CQ15652 2540 aa15.06■□□□□ 0
CLN5-215ENST00000636767 CMC4P56277 68 aaPredicted RBP15.06■□□□□ 0
CLN5-215ENST00000636767 FAM110AQ9BQ89 295 aa15.06■□□□□ 0
CLN5-215ENST00000636767 ATP5G1P05496 136 aa15.05■□□□□ 0
CLN5-215ENST00000636767 C14orf132Q9NPU4 83 aa15.05■□□□□ -0
CLN5-215ENST00000636767 TMEM126AQ9H061 195 aa15.04■□□□□ -0
CLN5-215ENST00000636767 C3orf22Q8N5N4 141 aa15.04■□□□□ -0
CLN5-215ENST00000636767 OBSCN-AS1Q96MR7 158 aa15.04■□□□□ -0
CLN5-215ENST00000636767 SONP18583 2426 aaKnown RBP15.04■□□□□ -0
CLN5-215ENST00000636767 LECT2O14960 151 aa15.03■□□□□ -0
CLN5-215ENST00000636767 PAX4O43316 350 aa15.03■□□□□ -0
CLN5-215ENST00000636767 TENM4Q6N022 2769 aa15.03■□□□□ -0
CLN5-215ENST00000636767 LINC00959A0A1B0GUT2 108 aa15.03■□□□□ -0
CLN5-215ENST00000636767 IGLV1-51P01701 117 aa15.02□□□□□ -0.01
CLN5-215ENST00000636767 C11orf68Q9H3H3 251 aaKnown RBP15.02□□□□□ -0.01
CLN5-215ENST00000636767 NF1P21359 2839 aa15.01□□□□□ -0.01
CLN5-215ENST00000636767 NIPBLQ6KC79 2804 aaeCLIP15.01□□□□□ -0.01
CLN5-215ENST00000636767 C9orf153Q5TBE3 101 aa15□□□□□ -0.01
CLN5-215ENST00000636767 OR13C6PQ8NH95 151 aa15□□□□□ -0.01
CLN5-215ENST00000636767 UQCRQO14949 82 aa15□□□□□ -0.01
CLN5-215ENST00000636767 KLK5Q9Y337 293 aaPredicted RBP15□□□□□ -0.01
CLN5-215ENST00000636767 LY6G6DO95868 133 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms