RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 TRAV13-1A0A0B4J241 112 aa6.88□□□□□ -1.31
CACNA1A-216ENST00000635742 TRAV8-6A0A0B4J262 113 aa6.88□□□□□ -1.31
CACNA1A-216ENST00000635742 TMEM223A0PJW6 202 aa6.88□□□□□ -1.31
CACNA1A-216ENST00000635742 SH2D6Q7Z4S9 175 aa6.88□□□□□ -1.31
CACNA1A-216ENST00000635742 MAPKAPK5-AS1Q8N8E1 139 aa6.88□□□□□ -1.31
CACNA1A-216ENST00000635742 TMEM262E9PQX1 116 aa6.87□□□□□ -1.31
CACNA1A-216ENST00000635742 CCL25O15444 150 aa6.87□□□□□ -1.31
CACNA1A-216ENST00000635742 TSPEAR-AS2P59090 65 aa6.87□□□□□ -1.31
CACNA1A-216ENST00000635742 HERVK_113P61574 105 aa6.87□□□□□ -1.31
CACNA1A-216ENST00000635742 COX6A2Q02221 97 aa6.87□□□□□ -1.31
CACNA1A-216ENST00000635742 UBE2V1Q13404 147 aa6.87□□□□□ -1.31
CACNA1A-216ENST00000635742 LINC00242Q5T6M2 205 aa6.87□□□□□ -1.31
CACNA1A-216ENST00000635742 LELP1Q5T871 98 aa6.87□□□□□ -1.31
CACNA1A-216ENST00000635742 IGHV3-64A0A075B6Q5 118 aa6.86□□□□□ -1.31
CACNA1A-216ENST00000635742 IGLV5-45A0A087WSX0 123 aa6.86□□□□□ -1.31
CACNA1A-216ENST00000635742 IGKV3OR2-268A0A0C4DH90 116 aa6.86□□□□□ -1.31
CACNA1A-216ENST00000635742 FAM19A3Q7Z5A8 133 aa6.86□□□□□ -1.31
CACNA1A-216ENST00000635742 DNHD1Q96M86 4753 aa6.86□□□□□ -1.31
CACNA1A-216ENST00000635742 TRAV10A0A0B4J240 114 aa6.86□□□□□ -1.31
CACNA1A-216ENST00000635742 LYPD5Q6UWN5 251 aa6.86□□□□□ -1.31
CACNA1A-216ENST00000635742 CDKN2A-AS1Q9UH64 79 aa6.86□□□□□ -1.31
CACNA1A-216ENST00000635742 MRPS16Q9Y3D3 137 aaKnown RBP6.86□□□□□ -1.31
CACNA1A-216ENST00000635742 TRAV8-3A0A0A6YYJ7 113 aa6.85□□□□□ -1.31
CACNA1A-216ENST00000635742 A0A1B0GUV1 79 aa6.85□□□□□ -1.31
CACNA1A-216ENST00000635742 SPINK8P0C7L1 97 aa6.85□□□□□ -1.31
CACNA1A-216ENST00000635742 HERVK_113P63121 156 aa6.84□□□□□ -1.31
CACNA1A-216ENST00000635742 CLPSL2Q6UWE3 100 aa6.84□□□□□ -1.31
CACNA1A-216ENST00000635742 LEPROTO15243 131 aa6.84□□□□□ -1.32
CACNA1A-216ENST00000635742 MYMXA0A1B0GTQ4 84 aa6.83□□□□□ -1.32
CACNA1A-216ENST00000635742 ZNF815PA8K554 130 aa6.83□□□□□ -1.32
CACNA1A-216ENST00000635742 J3QQQ9 107 aa6.83□□□□□ -1.32
CACNA1A-216ENST00000635742 MALP21145 153 aa6.83□□□□□ -1.32
CACNA1A-216ENST00000635742 SEC11AP67812 179 aa6.83□□□□□ -1.32
CACNA1A-216ENST00000635742 ESRGQ1W209 222 aa6.83□□□□□ -1.32
CACNA1A-216ENST00000635742 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 LINC00959A0A1B0GUT2 108 aa6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 IGHV3-30-3P0DP02 117 aa6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 HINT1P49773 126 aaPredicted RBP6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 BATFQ16520 125 aa6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 WFDC10BQ8IUB3 73 aa6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 PLEKHB2Q96CS7 222 aa6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 V9GYY9 64 aa6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 H3BRM9 83 aa6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 ANGP03950 147 aaKnown RBP6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 LGALS3P17931 250 aaKnown RBP6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 COL5A1-AS1Q5SY13 56 aa6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 LINC00269Q8N2A0 174 aa6.82□□□□□ -1.32
CACNA1A-216ENST00000635742 SMIM1B2RUZ4 78 aa6.81□□□□□ -1.32
CACNA1A-216ENST00000635742 HIGD1BQ9P298 99 aa6.81□□□□□ -1.32
CACNA1A-216ENST00000635742 IGHV3-30P01768 117 aa6.8□□□□□ -1.32
CACNA1A-216ENST00000635742 IGHV3-33P01772 117 aa6.8□□□□□ -1.32
CACNA1A-216ENST00000635742 IGHV3-30-5P0DP03 117 aa6.8□□□□□ -1.32
CACNA1A-216ENST00000635742 REG3AQ06141 175 aa6.8□□□□□ -1.32
CACNA1A-216ENST00000635742 C15orf53Q8NAA6 179 aa6.8□□□□□ -1.32
CACNA1A-216ENST00000635742 IGHV3OR16-9A0A0B4J2B5 98 aa6.8□□□□□ -1.32
CACNA1A-216ENST00000635742 IGLV5-39A0A0G2JS06 123 aa6.8□□□□□ -1.32
CACNA1A-216ENST00000635742 IGLL5B9A064 214 aa6.79□□□□□ -1.32
CACNA1A-216ENST00000635742 NHLRC4P0CG21 123 aaPredicted RBP6.79□□□□□ -1.32
CACNA1A-216ENST00000635742 XCL1P47992 114 aa6.79□□□□□ -1.32
CACNA1A-216ENST00000635742 HSD52Q0P140 79 aa6.79□□□□□ -1.32
CACNA1A-216ENST00000635742 BVES-AS1Q5T3Y7 98 aa6.79□□□□□ -1.32
CACNA1A-216ENST00000635742 COL7A1Q02388 2944 aa6.78□□□□□ -1.32
CACNA1A-216ENST00000635742 IGLV10-54A0A075B6I4 117 aa6.78□□□□□ -1.32
CACNA1A-216ENST00000635742 SS18Q15532 418 aa6.78□□□□□ -1.32
CACNA1A-216ENST00000635742 SCGB1D4Q6XE38 83 aa6.78□□□□□ -1.32
CACNA1A-216ENST00000635742 C10orf126Q8N4M7 172 aa6.78□□□□□ -1.32
CACNA1A-216ENST00000635742 KLK12Q9UKR0 248 aa6.78□□□□□ -1.32
CACNA1A-216ENST00000635742 STAB2Q8WWQ8 2551 aa6.78□□□□□ -1.32
CACNA1A-216ENST00000635742 ZFAND6Q6FIF0 208 aa6.78□□□□□ -1.32
CACNA1A-216ENST00000635742 C5orf38Q86SI9 138 aa6.78□□□□□ -1.32
CACNA1A-216ENST00000635742 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
CACNA1A-216ENST00000635742 NDUFA12Q9UI09 145 aa6.78□□□□□ -1.32
CACNA1A-216ENST00000635742 PRKDCP78527 4128 aaKnown RBP6.77□□□□□ -1.32
CACNA1A-216ENST00000635742 CHCHD10Q8WYQ3 142 aaPredicted RBP6.77□□□□□ -1.33
CACNA1A-216ENST00000635742 PPDPFQ9H3Y8 114 aa6.77□□□□□ -1.33
CACNA1A-216ENST00000635742 PRR34Q9NV39 138 aa6.77□□□□□ -1.33
CACNA1A-216ENST00000635742 A0A087WZ39 114 aa6.76□□□□□ -1.33
CACNA1A-216ENST00000635742 ENHOQ6UWT2 76 aa6.76□□□□□ -1.33
CACNA1A-216ENST00000635742 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
CACNA1A-216ENST00000635742 A0A0J9YXY3 114 aa6.76□□□□□ -1.33
CACNA1A-216ENST00000635742 NDUFA1O15239 70 aa6.75□□□□□ -1.33
CACNA1A-216ENST00000635742 GCSHP23434 173 aa6.75□□□□□ -1.33
CACNA1A-216ENST00000635742 FXYD2P54710 66 aa6.75□□□□□ -1.33
CACNA1A-216ENST00000635742 LINC01556Q5JQF7 62 aa6.75□□□□□ -1.33
CACNA1A-216ENST00000635742 UBE2WQ96B02 151 aa6.75□□□□□ -1.33
CACNA1A-216ENST00000635742 HIST1H4GQ99525 98 aa6.75□□□□□ -1.33
CACNA1A-216ENST00000635742 MEGF8Q7Z7M0 2845 aa6.75□□□□□ -1.33
CACNA1A-216ENST00000635742 CRPP02741 224 aa6.74□□□□□ -1.33
CACNA1A-216ENST00000635742 CD164L2Q6UWJ8 174 aa6.74□□□□□ -1.33
CACNA1A-216ENST00000635742 Q9H8V8 135 aa6.74□□□□□ -1.33
CACNA1A-216ENST00000635742 FOXI1Q12951 378 aa6.74□□□□□ -1.33
CACNA1A-216ENST00000635742 TAL2Q16559 108 aa6.74□□□□□ -1.33
CACNA1A-216ENST00000635742 CEND1Q8N111 149 aa6.74□□□□□ -1.33
CACNA1A-216ENST00000635742 COX7B2Q8TF08 81 aa6.74□□□□□ -1.33
CACNA1A-216ENST00000635742 SPANXB1Q9NS25 103 aaPredicted RBP6.74□□□□□ -1.33
CACNA1A-216ENST00000635742 TOMM7Q9P0U1 55 aa6.74□□□□□ -1.33
CACNA1A-216ENST00000635742 GAGE12HA6NDE8 117 aa6.73□□□□□ -1.33
CACNA1A-216ENST00000635742 DNAH10OSP0CZ25 163 aa6.73□□□□□ -1.33
CACNA1A-216ENST00000635742 CCL18P55774 89 aa6.73□□□□□ -1.33
CACNA1A-216ENST00000635742 ZNF625Q96I27 306 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms