RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 CCDC32Q9BV29 185 aa2.88□□□□□ -1.95
LINC00649-220ENST00000628906 TRAV13-1A0A0B4J241 112 aa2.87□□□□□ -1.95
LINC00649-220ENST00000628906 C2orf82Q6UX34 121 aa2.87□□□□□ -1.95
LINC00649-220ENST00000628906 THAP6Q8TBB0 222 aa2.87□□□□□ -1.95
LINC00649-220ENST00000628906 SMIM4Q8WVI0 70 aa2.87□□□□□ -1.95
LINC00649-220ENST00000628906 RBM38Q9H0Z9 239 aaKnown RBP2.87□□□□□ -1.95
LINC00649-220ENST00000628906 KCNIP2Q9NS61 270 aa2.87□□□□□ -1.95
LINC00649-220ENST00000628906 MCUBQ9NWR8 336 aa2.87□□□□□ -1.95
LINC00649-220ENST00000628906 BLOC1S6Q9UL45 172 aa2.87□□□□□ -1.95
LINC00649-220ENST00000628906 ZFP30Q9Y2G7 519 aa2.87□□□□□ -1.95
LINC00649-220ENST00000628906 ZNF706Q9Y5V0 76 aaPredicted RBP2.87□□□□□ -1.95
LINC00649-220ENST00000628906 IGLV5-37A0A075B6J1 123 aa2.86□□□□□ -1.95
LINC00649-220ENST00000628906 IGSF23A1L1A6 192 aa2.86□□□□□ -1.95
LINC00649-220ENST00000628906 NOL3O60936 208 aaKnown RBP2.86□□□□□ -1.95
LINC00649-220ENST00000628906 DEFA3P59666 94 aa2.86□□□□□ -1.95
LINC00649-220ENST00000628906 HIGD2AQ9BW72 106 aa2.86□□□□□ -1.95
LINC00649-220ENST00000628906 TMEM126AQ9H061 195 aa2.86□□□□□ -1.95
LINC00649-220ENST00000628906 CHTOPQ9Y3Y2 248 aaKnown RBP2.86□□□□□ -1.95
LINC00649-220ENST00000628906 CSDC2Q9Y534 153 aaKnown RBP2.86□□□□□ -1.95
LINC00649-220ENST00000628906 TRBV20-1A0A075B6N2 111 aa2.85□□□□□ -1.95
LINC00649-220ENST00000628906 IGKV2-28A0A075B6P5 120 aa2.85□□□□□ -1.95
LINC00649-220ENST00000628906 C9orf170A2RU37 121 aa2.85□□□□□ -1.95
LINC00649-220ENST00000628906 IGKV2D-28P01615 120 aa2.85□□□□□ -1.95
LINC00649-220ENST00000628906 IGKV2-30P06310 120 aa2.85□□□□□ -1.95
LINC00649-220ENST00000628906 MOBPQ13875 183 aa2.85□□□□□ -1.95
LINC00649-220ENST00000628906 LINC00483Q53H64 154 aa2.85□□□□□ -1.95
LINC00649-220ENST00000628906 STX12Q86Y82 276 aa2.85□□□□□ -1.95
LINC00649-220ENST00000628906 FAM210AQ96ND0 272 aa2.85□□□□□ -1.95
LINC00649-220ENST00000628906 WDR61Q9GZS3 305 aaKnown RBP2.85□□□□□ -1.95
LINC00649-220ENST00000628906 C17orf112F2Z3M2 114 aa2.84□□□□□ -1.95
LINC00649-220ENST00000628906 M0R378 163 aa2.84□□□□□ -1.95
LINC00649-220ENST00000628906 GATD1Q8NB37 220 aa2.84□□□□□ -1.95
LINC00649-220ENST00000628906 MRAP2Q96G30 205 aa2.84□□□□□ -1.95
LINC00649-220ENST00000628906 SDHAF1A6NFY7 115 aa2.83□□□□□ -1.96
LINC00649-220ENST00000628906 TMEM238C9JI98 176 aa2.83□□□□□ -1.96
LINC00649-220ENST00000628906 MZT2BQ6NZ67 158 aa2.83□□□□□ -1.96
LINC00649-220ENST00000628906 ATP11AUNQ6ZP68 121 aa2.83□□□□□ -1.96
LINC00649-220ENST00000628906 VCXQ9H320 206 aa2.83□□□□□ -1.96
LINC00649-220ENST00000628906 LSM5Q9Y4Y9 91 aaKnown RBP2.83□□□□□ -1.96
LINC00649-220ENST00000628906 IGLV9-49A0A0B4J1Y8 123 aa2.82□□□□□ -1.96
LINC00649-220ENST00000628906 I3L3M4 83 aa2.82□□□□□ -1.96
LINC00649-220ENST00000628906 HMGB3O15347 200 aaKnown RBP2.82□□□□□ -1.96
LINC00649-220ENST00000628906 ARL14EPLP0DKL9 152 aa2.82□□□□□ -1.96
LINC00649-220ENST00000628906 PVALBP20472 110 aaPredicted RBP2.82□□□□□ -1.96
LINC00649-220ENST00000628906 RNASE13Q5GAN3 156 aaKnown RBP2.82□□□□□ -1.96
LINC00649-220ENST00000628906 Q6ZVH6 145 aa2.82□□□□□ -1.96
LINC00649-220ENST00000628906 MCFD2Q8NI22 146 aa2.82□□□□□ -1.96
LINC00649-220ENST00000628906 TMEM242Q9NWH2 141 aa2.82□□□□□ -1.96
LINC00649-220ENST00000628906 IGLV5-39A0A0G2JS06 123 aa2.81□□□□□ -1.96
LINC00649-220ENST00000628906 A0A1W2PPV4 95 aa2.81□□□□□ -1.96
LINC00649-220ENST00000628906 STAG3L2P0CL84 134 aa2.81□□□□□ -1.96
LINC00649-220ENST00000628906 STAG3L3P0CL85 134 aa2.81□□□□□ -1.96
LINC00649-220ENST00000628906 PMCHP20382 165 aa2.81□□□□□ -1.96
LINC00649-220ENST00000628906 LSM3P62310 102 aaKnown RBP2.81□□□□□ -1.96
LINC00649-220ENST00000628906 KIAA1644Q3SXP7 199 aa2.81□□□□□ -1.96
LINC00649-220ENST00000628906 NKAPP1Q8N9T2 125 aa2.81□□□□□ -1.96
LINC00649-220ENST00000628906 LIMD2Q9BT23 127 aa2.81□□□□□ -1.96
LINC00649-220ENST00000628906 A0A1W2PRE2 83 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 RAB19A4D1S5 217 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 A8MWP4 228 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 PEX7O00628 323 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 LTAP01374 205 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 MT1BP07438 61 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 GCHFRP30047 84 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 PCP4P48539 62 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 AQP4P55087 323 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 FAM19A3Q7Z5A8 133 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 MPLKIPQ8TAP9 179 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 DEDD2Q8WXF8 326 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 HIST1H2BAQ96A08 127 aa2.8□□□□□ -1.96
LINC00649-220ENST00000628906 RPL39LQ96EH5 51 aaKnown RBP2.8□□□□□ -1.96
LINC00649-220ENST00000628906 FXYD6-FXYD2A0A087WZ82 144 aa2.79□□□□□ -1.96
LINC00649-220ENST00000628906 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
LINC00649-220ENST00000628906 FAM236DA0A1B0GTK5 79 aa2.79□□□□□ -1.96
LINC00649-220ENST00000628906 C7orf77A4D0Y5 90 aa2.79□□□□□ -1.96
LINC00649-220ENST00000628906 SCO1O75880 301 aa2.79□□□□□ -1.96
LINC00649-220ENST00000628906 TRGC1P0CF51 173 aa2.79□□□□□ -1.96
LINC00649-220ENST00000628906 IGLC6P0CF74 106 aa2.79□□□□□ -1.96
LINC00649-220ENST00000628906 FAM236CP0DP71 79 aa2.79□□□□□ -1.96
LINC00649-220ENST00000628906 TWIST1Q15672 202 aa2.79□□□□□ -1.96
LINC00649-220ENST00000628906 FMC1Q96HJ9 113 aa2.79□□□□□ -1.96
LINC00649-220ENST00000628906 RNASE7Q9H1E1 156 aaKnown RBP2.79□□□□□ -1.96
LINC00649-220ENST00000628906 TRBV6-5A0A0K0K1A5 114 aa2.78□□□□□ -1.96
LINC00649-220ENST00000628906 FAM25EA8MYX2 175 aa2.78□□□□□ -1.96
LINC00649-220ENST00000628906 IFNA1P01562 189 aa2.78□□□□□ -1.96
LINC00649-220ENST00000628906 FAUP35544 74 aaKnown RBP2.78□□□□□ -1.96
LINC00649-220ENST00000628906 TAGLN2P37802 199 aaKnown RBP2.78□□□□□ -1.96
LINC00649-220ENST00000628906 SMAGPQ0VAQ4 97 aa2.78□□□□□ -1.96
LINC00649-220ENST00000628906 IL15RAQ13261 267 aa2.78□□□□□ -1.96
LINC00649-220ENST00000628906 C10orf91Q5T1B1 145 aa2.78□□□□□ -1.96
LINC00649-220ENST00000628906 Q6ZUT4 128 aa2.78□□□□□ -1.96
LINC00649-220ENST00000628906 Q75L30 129 aa2.78□□□□□ -1.96
LINC00649-220ENST00000628906 SMCR5Q8TEV8 140 aa2.78□□□□□ -1.96
LINC00649-220ENST00000628906 TMEM167BQ9NRX6 74 aa2.78□□□□□ -1.96
LINC00649-220ENST00000628906 GAGE2AQ6NT46 116 aa2.77□□□□□ -1.97
LINC00649-220ENST00000628906 FAM104AQ969W3 186 aa2.77□□□□□ -1.97
LINC00649-220ENST00000628906 CNBD2Q96M20 576 aa2.77□□□□□ -1.97
LINC00649-220ENST00000628906 TIMM21Q9BVV7 248 aa2.77□□□□□ -1.97
LINC00649-220ENST00000628906 RAB26Q9ULW5 256 aa2.77□□□□□ -1.97
LINC00649-220ENST00000628906 TGIF2-C20orf24A0A0A6YYL0 155 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms