RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 PROK2Q9HC23 129 aa0.16□□□□□ -2.38
CDKL5-207ENST00000624700 EFCAB5A4FU69 1503 aa0.16□□□□□ -2.38
CDKL5-207ENST00000624700 ABCC3O15438 1527 aa0.16□□□□□ -2.38
CDKL5-207ENST00000624700 ARFGEF1Q9Y6D6 1849 aa0.15□□□□□ -2.38
CDKL5-207ENST00000624700 KIF1AQ12756 1690 aa0.15□□□□□ -2.39
CDKL5-207ENST00000624700 NCOA3Q9Y6Q9 1424 aa0.15□□□□□ -2.39
CDKL5-207ENST00000624700 A0A1B0GX51 115 aa0.15□□□□□ -2.39
CDKL5-207ENST00000624700 AKR1D1P51857 326 aa0.15□□□□□ -2.39
CDKL5-207ENST00000624700 DEFB124Q8NES8 71 aa0.15□□□□□ -2.39
CDKL5-207ENST00000624700 CALML5Q9NZT1 146 aa0.15□□□□□ -2.39
CDKL5-207ENST00000624700 MROH1Q8NDA8 1641 aa0.15□□□□□ -2.39
CDKL5-207ENST00000624700 ARHGEF10O15013 1369 aa0.15□□□□□ -2.39
CDKL5-207ENST00000624700 TOGARAM1Q9Y4F4 1720 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 TRAV36DV7A0A075B6V5 113 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 NDUFA11Q86Y39 141 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 TMEM141Q96I45 108 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 PRR15LQ9BU68 103 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 BET1LQ9NYM9 111 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 GINS2Q9Y248 185 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 NDUFAF1Q9Y375 327 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 DNAH8Q96JB1 4490 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 CCDC18Q5T9S5 1454 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 ARHGAP35Q9NRY4 1499 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 LAMB1P07942 1786 aa0.14□□□□□ -2.39
CDKL5-207ENST00000624700 TRAV17A0A0B4J275 112 aa0.13□□□□□ -2.39
CDKL5-207ENST00000624700 F2Z2F3 143 aa0.13□□□□□ -2.39
CDKL5-207ENST00000624700 SMIM24O75264 130 aa0.13□□□□□ -2.39
CDKL5-207ENST00000624700 RBP4P02753 201 aa0.13□□□□□ -2.39
CDKL5-207ENST00000624700 PAEPP09466 180 aa0.13□□□□□ -2.39
CDKL5-207ENST00000624700 PYYP10082 97 aa0.13□□□□□ -2.39
CDKL5-207ENST00000624700 FANCD2Q9BXW9 1451 aa0.13□□□□□ -2.39
CDKL5-207ENST00000624700 NRAPQ86VF7 1730 aa0.13□□□□□ -2.39
CDKL5-207ENST00000624700 XRN1Q8IZH2 1706 aaKnown RBP0.13□□□□□ -2.39
CDKL5-207ENST00000624700 PARP4Q9UKK3 1724 aaKnown RBP0.13□□□□□ -2.39
CDKL5-207ENST00000624700 ABCA5Q8WWZ7 1642 aa0.13□□□□□ -2.39
CDKL5-207ENST00000624700 ATP7AQ04656 1500 aa0.13□□□□□ -2.39
CDKL5-207ENST00000624700 ERICH3Q5RHP9 1530 aa0.13□□□□□ -2.39
CDKL5-207ENST00000624700 NLRP1Q9C000 1473 aa0.12□□□□□ -2.39
CDKL5-207ENST00000624700 C9JAW5 83 aa0.12□□□□□ -2.39
CDKL5-207ENST00000624700 SCTP09683 121 aa0.12□□□□□ -2.39
CDKL5-207ENST00000624700 TMEM91Q6ZNR0 172 aa0.12□□□□□ -2.39
CDKL5-207ENST00000624700 SLC25A26Q70HW3 274 aa0.12□□□□□ -2.39
CDKL5-207ENST00000624700 SBF2Q86WG5 1849 aa0.12□□□□□ -2.39
CDKL5-207ENST00000624700 PRDM2Q13029 1718 aa0.12□□□□□ -2.39
CDKL5-207ENST00000624700 IFT172Q9UG01 1749 aa0.12□□□□□ -2.39
CDKL5-207ENST00000624700 UBR3Q6ZT12 1888 aa0.12□□□□□ -2.39
CDKL5-207ENST00000624700 KDM3BQ7LBC6 1761 aa0.11□□□□□ -2.39
CDKL5-207ENST00000624700 PLXNC1O60486 1568 aa0.11□□□□□ -2.39
CDKL5-207ENST00000624700 QSER1Q2KHR3 1735 aa0.11□□□□□ -2.39
CDKL5-207ENST00000624700 CXorf51AA0A1B0GTR3 108 aa0.11□□□□□ -2.39
CDKL5-207ENST00000624700 LOC730098B7Z3J9 87 aa0.11□□□□□ -2.39
CDKL5-207ENST00000624700 ZNF670-ZNF695F2Z2N8 137 aa0.11□□□□□ -2.39
CDKL5-207ENST00000624700 TCTE3Q8IZS6 198 aa0.11□□□□□ -2.39
CDKL5-207ENST00000624700 ATP6V0E2Q8NHE4 81 aa0.11□□□□□ -2.39
CDKL5-207ENST00000624700 BPESC1Q9GZL8 116 aa0.11□□□□□ -2.39
CDKL5-207ENST00000624700 LMO7Q8WWI1 1683 aa0.11□□□□□ -2.39
CDKL5-207ENST00000624700 ALS2Q96Q42 1657 aa0.11□□□□□ -2.39
CDKL5-207ENST00000624700 DDX60LQ5H9U9 1706 aaKnown RBP0.1□□□□□ -2.39
CDKL5-207ENST00000624700 DDX60Q8IY21 1712 aaKnown RBP0.1□□□□□ -2.39
CDKL5-207ENST00000624700 CCDC180Q9P1Z9 1646 aa0.1□□□□□ -2.39
CDKL5-207ENST00000624700 BORCS7-ASMTA0A0B4J1R7 106 aa0.1□□□□□ -2.39
CDKL5-207ENST00000624700 A0A1B0GW64 132 aa0.1□□□□□ -2.39
CDKL5-207ENST00000624700 GNG14A0A1W2PPG7 69 aa0.1□□□□□ -2.39
CDKL5-207ENST00000624700 HLA-DRB4P13762 266 aa0.1□□□□□ -2.39
CDKL5-207ENST00000624700 SPCS2Q15005 226 aa0.1□□□□□ -2.39
CDKL5-207ENST00000624700 OR8B8Q15620 311 aa0.1□□□□□ -2.39
CDKL5-207ENST00000624700 BANF2Q9H503 90 aa0.1□□□□□ -2.39
CDKL5-207ENST00000624700 HLA-DRB4X5D2U9 266 aa0.1□□□□□ -2.39
CDKL5-207ENST00000624700 PARP14Q460N5 1801 aa0.09□□□□□ -2.39
CDKL5-207ENST00000624700 PHIPQ8WWQ0 1821 aa0.09□□□□□ -2.39
CDKL5-207ENST00000624700 TCRBV3S1A0A5B6 114 aa0.09□□□□□ -2.4
CDKL5-207ENST00000624700 RBAKDNA6NC62 111 aa0.09□□□□□ -2.4
CDKL5-207ENST00000624700 DEGS1O15121 323 aa0.09□□□□□ -2.4
CDKL5-207ENST00000624700 SPINK1P00995 79 aa0.09□□□□□ -2.4
CDKL5-207ENST00000624700 CCDC153Q494R4 210 aa0.09□□□□□ -2.4
CDKL5-207ENST00000624700 Q5BKY6 102 aa0.09□□□□□ -2.4
CDKL5-207ENST00000624700 ERG28Q9UKR5 140 aa0.09□□□□□ -2.4
CDKL5-207ENST00000624700 LRRIQ1Q96JM4 1722 aa0.09□□□□□ -2.4
CDKL5-207ENST00000624700 USF3Q68DE3 2245 aa0.09□□□□□ -2.4
CDKL5-207ENST00000624700 CLTCQ00610 1675 aaKnown RBP0.08□□□□□ -2.4
CDKL5-207ENST00000624700 AGLP35573 1532 aa0.08□□□□□ -2.4
CDKL5-207ENST00000624700 NRXN2Q9P2S2 1712 aa0.08□□□□□ -2.4
CDKL5-207ENST00000624700 DBIP07108 87 aaKnown RBP0.08□□□□□ -2.4
CDKL5-207ENST00000624700 MT1HP80294 61 aa0.08□□□□□ -2.4
CDKL5-207ENST00000624700 SNX29P2Q8IUI4 249 aa0.08□□□□□ -2.4
CDKL5-207ENST00000624700 DYNLRB2Q8TF09 96 aa0.08□□□□□ -2.4
CDKL5-207ENST00000624700 NOP16Q9Y3C1 178 aaKnown RBP0.08□□□□□ -2.4
CDKL5-207ENST00000624700 DNAJC15Q9Y5T4 150 aa0.08□□□□□ -2.4
CDKL5-207ENST00000624700 MYH13Q9UKX3 1938 aa0.08□□□□□ -2.4
CDKL5-207ENST00000624700 POLA1P09884 1462 aaPredicted RBP0.08□□□□□ -2.4
CDKL5-207ENST00000624700 NFAT5O94916 1531 aa0.08□□□□□ -2.4
CDKL5-207ENST00000624700 NWD2Q9ULI1 1742 aa0.07□□□□□ -2.4
CDKL5-207ENST00000624700 H0YJX3 145 aa0.07□□□□□ -2.4
CDKL5-207ENST00000624700 CCDC179H3BU77 68 aa0.07□□□□□ -2.4
CDKL5-207ENST00000624700 NBEAP1P0C6P0 100 aa0.07□□□□□ -2.4
CDKL5-207ENST00000624700 RBM3P98179 157 aaKnown RBP0.07□□□□□ -2.4
CDKL5-207ENST00000624700 EMX2Q04743 252 aa0.07□□□□□ -2.4
CDKL5-207ENST00000624700 CYP2G1PQ6ZSU1 146 aa0.07□□□□□ -2.4
CDKL5-207ENST00000624700 MRC1P22897 1456 aa0.07□□□□□ -2.4
CDKL5-207ENST00000624700 GOLGA4Q13439 2230 aaKnown RBP0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms