RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 REG3AQ06141 175 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 C6orf99Q4VX62 202 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 POM121L12Q8N7R1 296 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 CNFNQ9BYD5 112 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 XAGE1AQ9HD64 81 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 PYGO1Q9Y3Y4 419 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 TRIOO75962 3097 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 CEP295Q9C0D2 2601 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 A0A096LNJ9 63 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 IBA57-AS1B1ANH7 110 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 CRIP2P52943 208 aaPredicted RBP4.16□□□□□ -1.74
ERCC6-213ENST00000624341 CHCHD10Q8WYQ3 142 aaPredicted RBP4.16□□□□□ -1.74
ERCC6-213ENST00000624341 USP17L23D6RBM5 183 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 MUC3AQ02505 3323 aa4.16□□□□□ -1.74
ERCC6-213ENST00000624341 C5orf42Q9H799 3197 aa4.15□□□□□ -1.74
ERCC6-213ENST00000624341 Q8N6K4 173 aa4.15□□□□□ -1.74
ERCC6-213ENST00000624341 ZFYVE26Q68DK2 2539 aa4.15□□□□□ -1.74
ERCC6-213ENST00000624341 IGIPA6NJ69 53 aa4.15□□□□□ -1.74
ERCC6-213ENST00000624341 FAM222AQ5U5X8 452 aa4.15□□□□□ -1.74
ERCC6-213ENST00000624341 KLLNB2CW77 178 aa4.15□□□□□ -1.75
ERCC6-213ENST00000624341 FSTL3O95633 263 aa4.15□□□□□ -1.75
ERCC6-213ENST00000624341 DCANP1Q8TF63 244 aa4.15□□□□□ -1.75
ERCC6-213ENST00000624341 A0A0U1RQV1 116 aa4.15□□□□□ -1.75
ERCC6-213ENST00000624341 Q6ZSV7 163 aa4.15□□□□□ -1.75
ERCC6-213ENST00000624341 TRBV6-8A0A0A6YYG3 113 aa4.14□□□□□ -1.75
ERCC6-213ENST00000624341 SERP2Q8N6R1 65 aa4.14□□□□□ -1.75
ERCC6-213ENST00000624341 IMUPQ9GZP8 106 aa4.14□□□□□ -1.75
ERCC6-213ENST00000624341 KMT2BQ9UMN6 2715 aaPredicted RBP4.14□□□□□ -1.75
ERCC6-213ENST00000624341 LINC00526Q96FQ7 95 aa4.14□□□□□ -1.75
ERCC6-213ENST00000624341 TIMM17BO60830 172 aa4.14□□□□□ -1.75
ERCC6-213ENST00000624341 SNURFQ9Y675 71 aa4.14□□□□□ -1.75
ERCC6-213ENST00000624341 DNAJC9-AS1A6NH13 148 aa4.14□□□□□ -1.75
ERCC6-213ENST00000624341 ZNF462Q96JM2 2506 aa4.14□□□□□ -1.75
ERCC6-213ENST00000624341 COX7CP15954 63 aa4.14□□□□□ -1.75
ERCC6-213ENST00000624341 TSPEAR-AS2P59090 65 aa4.14□□□□□ -1.75
ERCC6-213ENST00000624341 SMIM11BQ8TCY0 68 aa4.14□□□□□ -1.75
ERCC6-213ENST00000624341 A0A096LNI7 61 aa4.13□□□□□ -1.75
ERCC6-213ENST00000624341 H0Y9J4 135 aa4.13□□□□□ -1.75
ERCC6-213ENST00000624341 C9orf85Q96MD7 179 aa4.13□□□□□ -1.75
ERCC6-213ENST00000624341 AGRNO00468 2067 aa4.13□□□□□ -1.75
ERCC6-213ENST00000624341 IGKV2-24A0A0C4DH68 120 aa4.13□□□□□ -1.75
ERCC6-213ENST00000624341 LOC100131303A0A0U1RQF7 123 aa4.13□□□□□ -1.75
ERCC6-213ENST00000624341 ATP5EP2Q5VTU8 51 aa4.13□□□□□ -1.75
ERCC6-213ENST00000624341 HIGD2AQ9BW72 106 aa4.13□□□□□ -1.75
ERCC6-213ENST00000624341 Q6ZQY7 126 aa4.13□□□□□ -1.75
ERCC6-213ENST00000624341 SPTSSBQ8NFR3 76 aa4.13□□□□□ -1.75
ERCC6-213ENST00000624341 MRPS36P82909 103 aaKnown RBP4.13□□□□□ -1.75
ERCC6-213ENST00000624341 C11orf71Q6IPW1 123 aa4.13□□□□□ -1.75
ERCC6-213ENST00000624341 PRRC2AP48634 2157 aaKnown RBP4.13□□□□□ -1.75
ERCC6-213ENST00000624341 IGLV4-69A0A075B6H9 119 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 CCKP06307 115 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 EDN2P20800 178 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 UBE2D3P61077 147 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 Q6YL49 198 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 ZNF580Q9UK33 172 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 LINC00694P0DN24 101 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 TRBV6-4A0A1B0GX49 114 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 C3orf84H3BNL1 204 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 UBE2D2P62837 147 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 C1orf158Q8N1D5 194 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 SVIPQ8NHG7 77 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 LY6G6CO95867 125 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 C18orf65Q6ZTR6 163 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 HILS1P60008 231 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 WFDC10AQ9H1F0 79 aa4.12□□□□□ -1.75
ERCC6-213ENST00000624341 LINC00482Q8N8I6 264 aa4.11□□□□□ -1.75
ERCC6-213ENST00000624341 A0A087WVE0 104 aa4.11□□□□□ -1.75
ERCC6-213ENST00000624341 ANKRD11Q6UB99 2663 aaPredicted RBP4.11□□□□□ -1.75
ERCC6-213ENST00000624341 ADAMTSL4-AS1Q5T5F5 129 aa4.11□□□□□ -1.75
ERCC6-213ENST00000624341 LINC00242Q5T6M2 205 aa4.11□□□□□ -1.75
ERCC6-213ENST00000624341 NDUFC2-KCTD14E9PQ53 114 aa4.11□□□□□ -1.75
ERCC6-213ENST00000624341 PSMG3-AS1Q96PY0 264 aa4.11□□□□□ -1.75
ERCC6-213ENST00000624341 IGKV4-1P06312 121 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 PRR4Q16378 134 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 Q6Q795 121 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 LINC00959A0A1B0GUT2 108 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 IGHV4-31P0DP07 118 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 SHISA2Q6UWI4 295 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 ZNF292O60281 2723 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 IGLV2-18A0A075B6J9 118 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 M0QXV9 152 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 CDSNQ15517 529 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 CDC42SE2Q9NRR3 84 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 FRYQ5TBA9 3013 aa4.1□□□□□ -1.75
ERCC6-213ENST00000624341 IGKV2-28A0A075B6P5 120 aa4.09□□□□□ -1.75
ERCC6-213ENST00000624341 FAM240AA0A1B0GVK7 77 aa4.09□□□□□ -1.75
ERCC6-213ENST00000624341 LYRM9A8MSI8 78 aa4.09□□□□□ -1.75
ERCC6-213ENST00000624341 IGKV2D-28P01615 120 aa4.09□□□□□ -1.75
ERCC6-213ENST00000624341 IGLV1-40P01703 118 aa4.09□□□□□ -1.75
ERCC6-213ENST00000624341 PRYO14603 147 aa4.09□□□□□ -1.75
ERCC6-213ENST00000624341 CD164L2Q6UWJ8 174 aa4.09□□□□□ -1.75
ERCC6-213ENST00000624341 HRCT1Q6UXD1 115 aa4.09□□□□□ -1.75
ERCC6-213ENST00000624341 WFDC10BQ8IUB3 73 aa4.09□□□□□ -1.75
ERCC6-213ENST00000624341 C11orf45Q8TAV5 145 aa4.09□□□□□ -1.75
ERCC6-213ENST00000624341 COX6A2Q02221 97 aa4.09□□□□□ -1.76
ERCC6-213ENST00000624341 ZNF702PQ9H963 129 aa4.09□□□□□ -1.76
ERCC6-213ENST00000624341 SMIM9A6NGZ8 99 aa4.08□□□□□ -1.76
ERCC6-213ENST00000624341 SMIM1B2RUZ4 78 aa4.08□□□□□ -1.76
ERCC6-213ENST00000624341 Q6JHZ5 121 aa4.08□□□□□ -1.76
ERCC6-213ENST00000624341 FAM19A3Q7Z5A8 133 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms