RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 TMEM141Q96I45 108 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 RETNLBQ9BQ08 111 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 NMES1Q9C002 83 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 CDC42SE1Q9NRR8 79 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 LINC00474Q9P2X8 69 aa1.63□□□□□ -2.15
CPNE3-213ENST00000622183 BAZ2BQ9UIF8 2168 aaKnown RBP1.63□□□□□ -2.15
CPNE3-213ENST00000622183 NCOA6Q14686 2063 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-213ENST00000622183 SCN3AQ9NY46 2000 aa1.62□□□□□ -2.15
CPNE3-213ENST00000622183 IGKV2-40A0A087WW87 121 aaPredicted RBP1.62□□□□□ -2.15
CPNE3-213ENST00000622183 IGLV3-32A0A0A0MS00 114 aa1.62□□□□□ -2.15
CPNE3-213ENST00000622183 TRBV10-3A0A0K0K1G6 114 aa1.62□□□□□ -2.15
CPNE3-213ENST00000622183 MYMXA0A1B0GTQ4 84 aa1.62□□□□□ -2.15
CPNE3-213ENST00000622183 IGKV2D-40P01614 121 aaPredicted RBP1.62□□□□□ -2.15
CPNE3-213ENST00000622183 GCHFRP30047 84 aa1.62□□□□□ -2.15
CPNE3-213ENST00000622183 ROMO1P60602 79 aa1.62□□□□□ -2.15
CPNE3-213ENST00000622183 Q6JHZ5 121 aa1.62□□□□□ -2.15
CPNE3-213ENST00000622183 CLECL1Q8IZS7 167 aa1.62□□□□□ -2.15
CPNE3-213ENST00000622183 LINC00269Q8N2A0 174 aa1.62□□□□□ -2.15
CPNE3-213ENST00000622183 Q8N814 137 aa1.62□□□□□ -2.15
CPNE3-213ENST00000622183 DYNLRB2Q8TF09 96 aa1.62□□□□□ -2.15
CPNE3-213ENST00000622183 MYO7AQ13402 2215 aa1.61□□□□□ -2.15
CPNE3-213ENST00000622183 TRBV25-1A0A075B6N4 114 aa1.61□□□□□ -2.15
CPNE3-213ENST00000622183 hDV103S1A0JD37 113 aa1.61□□□□□ -2.15
CPNE3-213ENST00000622183 CRYM-AS1A6NIL9 109 aa1.61□□□□□ -2.15
CPNE3-213ENST00000622183 ANGP03950 147 aaKnown RBP1.61□□□□□ -2.15
CPNE3-213ENST00000622183 HMGN2P05204 90 aaKnown RBP1.61□□□□□ -2.15
CPNE3-213ENST00000622183 UBE2D1P51668 147 aa1.61□□□□□ -2.15
CPNE3-213ENST00000622183 ATP5EP2Q5VTU8 51 aa1.61□□□□□ -2.15
CPNE3-213ENST00000622183 RPL7L1Q6DKI1 246 aaKnown RBP1.61□□□□□ -2.15
CPNE3-213ENST00000622183 PPP1R1CQ8WVI7 109 aa1.61□□□□□ -2.15
CPNE3-213ENST00000622183 C14orf132Q9NPU4 83 aa1.61□□□□□ -2.15
CPNE3-213ENST00000622183 CMC2Q9NRP2 79 aa1.61□□□□□ -2.15
CPNE3-213ENST00000622183 NDUFA12Q9UI09 145 aa1.61□□□□□ -2.15
CPNE3-213ENST00000622183 HEATR1Q9H583 2144 aaKnown RBP1.61□□□□□ -2.15
CPNE3-213ENST00000622183 FREM1Q5H8C1 2179 aa1.61□□□□□ -2.15
CPNE3-213ENST00000622183 C4BP0C0L5 1744 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 NRXN2Q9P2S2 1712 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 IGKV3-7A0A075B6H7 116 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 IGKV2D-26A0A0A0MRZ7 120 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 LOC101927531A0A1B0GV80 90 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 LYNX1P0DP58 116 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 C9orf116Q5BN46 136 aaPredicted RBP1.6□□□□□ -2.15
CPNE3-213ENST00000622183 Q5VV11 94 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 C6orf201Q7Z4U5 140 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 BAGE3Q86Y29 109 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 BAGE2Q86Y30 109 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 FAM223AQ8IWN6 122 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 FAM19A2Q8N3H0 131 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 ABRACLQ9P1F3 81 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 PLXNB2O15031 1838 aa1.6□□□□□ -2.15
CPNE3-213ENST00000622183 TNRC6BQ9UPQ9 1833 aaKnown RBP1.6□□□□□ -2.15
CPNE3-213ENST00000622183 DEPDC5O75140 1603 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 LRP6O75581 1613 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 ZNF831Q5JPB2 1677 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 TRAV12-1A0A0B4J245 112 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 B4DSR2 109 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 HCRTO43612 131 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 RBM3P98179 157 aaKnown RBP1.59□□□□□ -2.15
CPNE3-213ENST00000622183 ZNF56Q15929 161 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 DEFB113Q30KQ7 82 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 TMEM254Q8TBM7 123 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 LIMD2Q9BT23 127 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 PRO1854Q9UHT4 67 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 UBE2D4Q9Y2X8 147 aa1.59□□□□□ -2.15
CPNE3-213ENST00000622183 C4AP0C0L4 1744 aa1.59□□□□□ -2.16
CPNE3-213ENST00000622183 TRAV22A0A0B4J277 110 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 CXorf51AA0A1B0GTR3 108 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 A0A1B0GWA3 101 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 IQCF6A8MYZ5 107 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 HCG22E2RYF7 251 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 E7EUB6 86 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 IL9P15248 144 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 IFI27P40305 119 aaPredicted RBP1.58□□□□□ -2.16
CPNE3-213ENST00000622183 C1orf134Q5TEV5 83 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 NCBP2-AS2Q69YL0 99 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 KRTAP26-1Q6PEX3 210 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 Q8N6K4 173 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 SMIM7Q9BQ49 75 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 BPESC1Q9GZL8 116 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 CDC42SE2Q9NRR3 84 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 C22orf24Q9Y442 160 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 HILPDAQ9Y5L2 63 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 SNURFQ9Y675 71 aa1.58□□□□□ -2.16
CPNE3-213ENST00000622183 RP1L1Q8IWN7 2480 aaPredicted RBP1.58□□□□□ -2.16
CPNE3-213ENST00000622183 FAM223BA6NKX1 122 aa1.57□□□□□ -2.16
CPNE3-213ENST00000622183 TMEM14DPA8MWL7 114 aa1.57□□□□□ -2.16
CPNE3-213ENST00000622183 C5orf67F2Z3F1 127 aa1.57□□□□□ -2.16
CPNE3-213ENST00000622183 PPYP01298 95 aa1.57□□□□□ -2.16
CPNE3-213ENST00000622183 COX6CP09669 75 aa1.57□□□□□ -2.16
CPNE3-213ENST00000622183 ARL14EPLP0DKL9 152 aa1.57□□□□□ -2.16
CPNE3-213ENST00000622183 SNRPGP62308 76 aaKnown RBP1.57□□□□□ -2.16
CPNE3-213ENST00000622183 PLGLAQ15195 96 aa1.57□□□□□ -2.16
CPNE3-213ENST00000622183 ZNF818PQ6ZRF7 136 aa1.57□□□□□ -2.16
CPNE3-213ENST00000622183 COL4A5P29400 1685 aa1.57□□□□□ -2.16
CPNE3-213ENST00000622183 TRAV1-2A0A0B4J238 106 aa1.56□□□□□ -2.16
CPNE3-213ENST00000622183 TRBV7-4A0A0J9YYF1 115 aa1.56□□□□□ -2.16
CPNE3-213ENST00000622183 TMEM30CPA0ZSE6 113 aa1.56□□□□□ -2.16
CPNE3-213ENST00000622183 CEBPZOSA8MTT3 80 aa1.56□□□□□ -2.16
CPNE3-213ENST00000622183 F8WEM9 126 aa1.56□□□□□ -2.16
CPNE3-213ENST00000622183 LEPROTL1O95214 131 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms