RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 DEFB130BP0DP73 79 aa15.06■□□□□ 0
LIME1-210ENST00000621325 DEFB130AP0DP74 79 aa15.06■□□□□ 0
LIME1-210ENST00000621325 SRSF9Q13242 221 aaKnown RBP eCLIP15.06■□□□□ 0
LIME1-210ENST00000621325 FHL2Q14192 279 aa15.06■□□□□ 0
LIME1-210ENST00000621325 DGAT2L7PQ6IED9 249 aa15.05■□□□□ 0
LIME1-210ENST00000621325 TCL1BO95988 128 aa15.05■□□□□ -0
LIME1-210ENST00000621325 TRBV6-4A0A1B0GX49 114 aa15.04■□□□□ -0
LIME1-210ENST00000621325 TINCRA0A1B0GVN0 87 aa15.04■□□□□ -0
LIME1-210ENST00000621325 UBE2D1P51668 147 aa15.04■□□□□ -0
LIME1-210ENST00000621325 IGHV3-30-3P0DP02 117 aa15.03■□□□□ -0
LIME1-210ENST00000621325 SBSPONQ8IVN8 264 aa15.03■□□□□ -0
LIME1-210ENST00000621325 TIMM21Q9BVV7 248 aa15.03■□□□□ -0
LIME1-210ENST00000621325 SMIM9A6NGZ8 99 aa15.02□□□□□ -0.01
LIME1-210ENST00000621325 A8MZ25 164 aa15.02□□□□□ -0.01
LIME1-210ENST00000621325 TMEM126AQ9H061 195 aa15.02□□□□□ -0.01
LIME1-210ENST00000621325 A4D1N5 150 aa15.01□□□□□ -0.01
LIME1-210ENST00000621325 Q6Q795 121 aa15.01□□□□□ -0.01
LIME1-210ENST00000621325 C10orf126Q8N4M7 172 aa15.01□□□□□ -0.01
LIME1-210ENST00000621325 DEFB135Q30KP9 77 aa15□□□□□ -0.01
LIME1-210ENST00000621325 COX6A2Q02221 97 aa15□□□□□ -0.01
LIME1-210ENST00000621325 CHCHD5Q9BSY4 110 aa15□□□□□ -0.01
LIME1-210ENST00000621325 CDKN2A-AS1Q9UH64 79 aa15□□□□□ -0.01
LIME1-210ENST00000621325 KIR2DL5BQ8NHK3 375 aa14.99□□□□□ -0.01
LIME1-210ENST00000621325 IGHV1-58A0A0C4DH39 117 aa14.98□□□□□ -0.01
LIME1-210ENST00000621325 LINC00612Q8N6U2 182 aa14.98□□□□□ -0.01
LIME1-210ENST00000621325 DEFB4AO15263 64 aa14.98□□□□□ -0.01
LIME1-210ENST00000621325 IGHV3-30P01768 117 aa14.98□□□□□ -0.01
LIME1-210ENST00000621325 IGHV3-30-5P0DP03 117 aa14.98□□□□□ -0.01
LIME1-210ENST00000621325 MRPL23Q16540 153 aaKnown RBP14.97□□□□□ -0.01
LIME1-210ENST00000621325 WFDC9Q8NEX5 89 aa14.97□□□□□ -0.01
LIME1-210ENST00000621325 VSIG2Q96IQ7 327 aa14.97□□□□□ -0.01
LIME1-210ENST00000621325 TMEM243Q9BU79 118 aa14.97□□□□□ -0.01
LIME1-210ENST00000621325 LINC00242Q5T6M2 205 aa14.96□□□□□ -0.01
LIME1-210ENST00000621325 C15orf53Q8NAA6 179 aa14.96□□□□□ -0.01
LIME1-210ENST00000621325 CDC42SE2Q9NRR3 84 aa14.96□□□□□ -0.01
LIME1-210ENST00000621325 TRAV13-1A0A0B4J241 112 aa14.96□□□□□ -0.01
LIME1-210ENST00000621325 A0A0J9YXY3 114 aa14.95□□□□□ -0.02
LIME1-210ENST00000621325 TIRAPP58753 221 aa14.95□□□□□ -0.02
LIME1-210ENST00000621325 FAM222AQ5U5X8 452 aa14.95□□□□□ -0.02
LIME1-210ENST00000621325 UBE2L6O14933 153 aa14.94□□□□□ -0.02
LIME1-210ENST00000621325 IGLV5-45A0A087WSX0 123 aa14.94□□□□□ -0.02
LIME1-210ENST00000621325 SCGB1C2P0DMR2 95 aa14.94□□□□□ -0.02
LIME1-210ENST00000621325 WIPF1O43516 503 aa14.93□□□□□ -0.02
LIME1-210ENST00000621325 FAM19A5Q7Z5A7 132 aaPredicted RBP14.93□□□□□ -0.02
LIME1-210ENST00000621325 NDUFA12Q9UI09 145 aa14.93□□□□□ -0.02
LIME1-210ENST00000621325 SLC25A20O43772 301 aa14.92□□□□□ -0.02
LIME1-210ENST00000621325 APOC4P55056 127 aa14.92□□□□□ -0.02
LIME1-210ENST00000621325 TRBV6-8A0A0A6YYG3 113 aa14.91□□□□□ -0.02
LIME1-210ENST00000621325 TMEM101Q96IK0 257 aa14.91□□□□□ -0.02
LIME1-210ENST00000621325 C9JAW5 83 aa14.9□□□□□ -0.02
LIME1-210ENST00000621325 GYPEP15421 78 aa14.9□□□□□ -0.02
LIME1-210ENST00000621325 HERVK_113P63121 156 aa14.9□□□□□ -0.02
LIME1-210ENST00000621325 IGHV4-28A0A0C4DH34 117 aa14.9□□□□□ -0.02
LIME1-210ENST00000621325 KRTAP24-1Q3LI83 254 aa14.9□□□□□ -0.02
LIME1-210ENST00000621325 LYRM7Q5U5X0 104 aa14.9□□□□□ -0.02
LIME1-210ENST00000621325 NTN5Q8WTR8 489 aaPredicted RBP14.9□□□□□ -0.02
LIME1-210ENST00000621325 LITAFQ99732 161 aa14.9□□□□□ -0.02
LIME1-210ENST00000621325 CFC1BP0CG36 223 aa14.88□□□□□ -0.03
LIME1-210ENST00000621325 CFC1P0CG37 223 aa14.88□□□□□ -0.03
LIME1-210ENST00000621325 IGHV4-30-4P0DP06 118 aa14.88□□□□□ -0.03
LIME1-210ENST00000621325 FAM19A3Q7Z5A8 133 aa14.88□□□□□ -0.03
LIME1-210ENST00000621325 MUSTN1Q8IVN3 82 aa14.88□□□□□ -0.03
LIME1-210ENST00000621325 IGLV4-60A0A075B6I1 120 aa14.88□□□□□ -0.03
LIME1-210ENST00000621325 ADAMTSL4-AS1Q5T5F5 129 aa14.87□□□□□ -0.03
LIME1-210ENST00000621325 FBN1P35555 2871 aaKnown RBP14.87□□□□□ -0.03
LIME1-210ENST00000621325 OXLD1Q5BKU9 147 aa14.87□□□□□ -0.03
LIME1-210ENST00000621325 KLK5Q9Y337 293 aaPredicted RBP14.87□□□□□ -0.03
LIME1-210ENST00000621325 A0A096LPF7 62 aa14.86□□□□□ -0.03
LIME1-210ENST00000621325 TRAV8-4A0A0B4J246 113 aa14.86□□□□□ -0.03
LIME1-210ENST00000621325 LYRM9A8MSI8 78 aa14.86□□□□□ -0.03
LIME1-210ENST00000621325 H7C423 109 aa14.86□□□□□ -0.03
LIME1-210ENST00000621325 EIF4EBP3O60516 100 aaPredicted RBP14.86□□□□□ -0.03
LIME1-210ENST00000621325 STAB1Q9NY15 2570 aa14.85□□□□□ -0.03
LIME1-210ENST00000621325 IGKV3OR2-268A0A0C4DH90 116 aa14.85□□□□□ -0.03
LIME1-210ENST00000621325 TEX49A0A1B0GTD5 131 aa14.85□□□□□ -0.03
LIME1-210ENST00000621325 PRO0255Q9UI72 69 aa14.85□□□□□ -0.03
LIME1-210ENST00000621325 CELA1Q9UNI1 258 aa14.85□□□□□ -0.03
LIME1-210ENST00000621325 IGLV5-39A0A0G2JS06 123 aa14.85□□□□□ -0.03
LIME1-210ENST00000621325 SMIM1B2RUZ4 78 aa14.85□□□□□ -0.03
LIME1-210ENST00000621325 Q8NAQ8 132 aa14.85□□□□□ -0.03
LIME1-210ENST00000621325 F5H768 121 aa14.83□□□□□ -0.04
LIME1-210ENST00000621325 PRSS2P07478 247 aa14.82□□□□□ -0.04
LIME1-210ENST00000621325 PAX4O43316 350 aa14.82□□□□□ -0.04
LIME1-210ENST00000621325 NPC2P61916 151 aa14.81□□□□□ -0.04
LIME1-210ENST00000621325 C9orf153Q5TBE3 101 aa14.81□□□□□ -0.04
LIME1-210ENST00000621325 J3KT08 172 aa14.81□□□□□ -0.04
LIME1-210ENST00000621325 NDUFA1O15239 70 aa14.81□□□□□ -0.04
LIME1-210ENST00000621325 KRTAP10-11P60412 298 aa14.81□□□□□ -0.04
LIME1-210ENST00000621325 DAD1P61803 113 aa14.8□□□□□ -0.04
LIME1-210ENST00000621325 DAND5Q8N907 189 aa14.8□□□□□ -0.04
LIME1-210ENST00000621325 Q9H8V8 135 aa14.8□□□□□ -0.04
LIME1-210ENST00000621325 MIFP14174 115 aa14.8□□□□□ -0.04
LIME1-210ENST00000621325 ZNF625Q96I27 306 aaPredicted RBP14.8□□□□□ -0.04
LIME1-210ENST00000621325 PRO1854Q9UHT4 67 aa14.79□□□□□ -0.04
LIME1-210ENST00000621325 CYSRT1A8MQ03 144 aa14.78□□□□□ -0.04
LIME1-210ENST00000621325 SPANXDQ9BXN6 97 aa14.78□□□□□ -0.04
LIME1-210ENST00000621325 SPANXCQ9NY87 97 aa14.78□□□□□ -0.04
LIME1-210ENST00000621325 MIAQ16674 131 aa14.77□□□□□ -0.04
LIME1-210ENST00000621325 PKD1L1Q8TDX9 2849 aa14.77□□□□□ -0.04
LIME1-210ENST00000621325 FAM236AA0A1B0GUQ0 79 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms