RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 MED12Q93074 2177 aa3.62□□□□□ -1.83
MATR3-228ENST00000620916 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
MATR3-228ENST00000620916 H0YGG7 62 aa3.62□□□□□ -1.83
MATR3-228ENST00000620916 PROP1O75360 226 aa3.62□□□□□ -1.83
MATR3-228ENST00000620916 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.62□□□□□ -1.83
MATR3-228ENST00000620916 DSCAMO60469 2012 aa3.62□□□□□ -1.83
MATR3-228ENST00000620916 C15orf32Q32M92 178 aa3.62□□□□□ -1.83
MATR3-228ENST00000620916 PIK3CD-AS1Q5SR53 167 aa3.62□□□□□ -1.83
MATR3-228ENST00000620916 C8orf49Q96NF6 230 aa3.62□□□□□ -1.83
MATR3-228ENST00000620916 UBL5Q9BZL1 73 aa3.62□□□□□ -1.83
MATR3-228ENST00000620916 MSRB1Q9NZV6 116 aa3.62□□□□□ -1.83
MATR3-228ENST00000620916 FN1P02751 2386 aaKnown RBP3.62□□□□□ -1.83
MATR3-228ENST00000620916 ALPK2Q86TB3 2170 aa3.62□□□□□ -1.83
MATR3-228ENST00000620916 JMJD7-PLA2G4BH0Y9G9 81 aa3.61□□□□□ -1.83
MATR3-228ENST00000620916 SPANXN1Q5VSR9 72 aa3.61□□□□□ -1.83
MATR3-228ENST00000620916 C14orf132Q9NPU4 83 aa3.61□□□□□ -1.83
MATR3-228ENST00000620916 FAM30AQ9NZY2 134 aa3.61□□□□□ -1.83
MATR3-228ENST00000620916 DNAH3Q8TD57 4116 aa3.61□□□□□ -1.83
MATR3-228ENST00000620916 ERHP84090 104 aaKnown RBP3.61□□□□□ -1.83
MATR3-228ENST00000620916 NDUFA4L2Q9NRX3 87 aa3.61□□□□□ -1.83
MATR3-228ENST00000620916 KIF25-AS1Q9Y6Z4 181 aa3.61□□□□□ -1.83
MATR3-228ENST00000620916 KRTAP24-1Q3LI83 254 aa3.61□□□□□ -1.83
MATR3-228ENST00000620916 LIMD2Q9BT23 127 aa3.61□□□□□ -1.83
MATR3-228ENST00000620916 DEFB126Q9BYW3 111 aa3.61□□□□□ -1.83
MATR3-228ENST00000620916 MRPL36Q9P0J6 103 aaKnown RBP3.61□□□□□ -1.83
MATR3-228ENST00000620916 DCHS2Q6V1P9 2916 aa3.6□□□□□ -1.83
MATR3-228ENST00000620916 SAA1P0DJI8 122 aaPredicted RBP3.6□□□□□ -1.83
MATR3-228ENST00000620916 TTTY12Q9BZ98 90 aa3.6□□□□□ -1.83
MATR3-228ENST00000620916 NDUFA12Q9UI09 145 aa3.6□□□□□ -1.83
MATR3-228ENST00000620916 TACC2O95359 2948 aa3.6□□□□□ -1.83
MATR3-228ENST00000620916 IGKV3D-15A0A087WSY6 115 aa3.6□□□□□ -1.83
MATR3-228ENST00000620916 IGHV3OR16-9A0A0B4J2B5 98 aa3.6□□□□□ -1.83
MATR3-228ENST00000620916 H0YGX0 51 aa3.6□□□□□ -1.83
MATR3-228ENST00000620916 Q75L30 129 aa3.6□□□□□ -1.83
MATR3-228ENST00000620916 ZNF625Q96I27 306 aaPredicted RBP3.6□□□□□ -1.83
MATR3-228ENST00000620916 CDC42SE1Q9NRR8 79 aa3.6□□□□□ -1.83
MATR3-228ENST00000620916 CSPG4Q6UVK1 2322 aa3.6□□□□□ -1.83
MATR3-228ENST00000620916 NACAE9PAV3 2078 aa3.6□□□□□ -1.83
MATR3-228ENST00000620916 FBN1P35555 2871 aaKnown RBP3.6□□□□□ -1.83
MATR3-228ENST00000620916 IGHV1-18A0A0C4DH31 117 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 PSCAO43653 123 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 SLURP1P55000 103 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 NREPQ16612 68 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 FAM218AQ96MZ4 157 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 LINC00167Q96N53 147 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 TRBV6-8A0A0A6YYG3 113 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 TRAV10A0A0B4J240 114 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 TRAV12-3A0A0B4J271 114 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 LCE6AA0A183 80 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 HCG22E2RYF7 251 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 C3orf84H3BNL1 204 aa3.59□□□□□ -1.83
MATR3-228ENST00000620916 S100A4P26447 101 aaKnown RBP3.59□□□□□ -1.83
MATR3-228ENST00000620916 CSMD2Q7Z408 3487 aa3.59□□□□□ -1.84
MATR3-228ENST00000620916 IGHV4OR15-8A0A075B7B6 117 aa3.59□□□□□ -1.84
MATR3-228ENST00000620916 A0A087WW49 117 aa3.59□□□□□ -1.84
MATR3-228ENST00000620916 H3BRN7 92 aa3.59□□□□□ -1.84
MATR3-228ENST00000620916 TRGV3P03979 118 aa3.59□□□□□ -1.84
MATR3-228ENST00000620916 IGHV3-30-3P0DP02 117 aa3.59□□□□□ -1.84
MATR3-228ENST00000620916 ZNF32P17041 273 aa3.59□□□□□ -1.84
MATR3-228ENST00000620916 ANK2Q01484 3957 aa3.59□□□□□ -1.84
MATR3-228ENST00000620916 FLNAP21333 2647 aaKnown RBP3.58□□□□□ -1.84
MATR3-228ENST00000620916 HIVEP2P31629 2446 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 IGHV7-4-1A0A0J9YVY3 117 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 DEFB108AA8MXU0 73 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 IGHV3-9P01782 118 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 ZFP36P26651 326 aaKnown RBP3.58□□□□□ -1.84
MATR3-228ENST00000620916 HCP5Q6MZN7 132 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 C11orf72Q8NBR9 251 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 PSPHP1O15172 72 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 PRR3P79522 188 aaKnown RBP3.58□□□□□ -1.84
MATR3-228ENST00000620916 Q6ZSV7 163 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 C18orf65Q6ZTR6 163 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 NOTCH2NLQ7Z3S9 236 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 C1orf64Q8NEQ6 169 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 KLK15Q9H2R5 256 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 USF3Q68DE3 2245 aa3.58□□□□□ -1.84
MATR3-228ENST00000620916 C9orf106Q8NAJ2 232 aa3.57□□□□□ -1.84
MATR3-228ENST00000620916 ABCA4P78363 2273 aa3.57□□□□□ -1.84
MATR3-228ENST00000620916 COL6A5A8TX70 2615 aa3.57□□□□□ -1.84
MATR3-228ENST00000620916 LOC101927531A0A1B0GV80 90 aa3.57□□□□□ -1.84
MATR3-228ENST00000620916 NDUFA1O15239 70 aa3.57□□□□□ -1.84
MATR3-228ENST00000620916 C9orf129Q5T035 196 aaKnown RBP3.57□□□□□ -1.84
MATR3-228ENST00000620916 LINC00308Q8TCZ7 52 aa3.57□□□□□ -1.84
MATR3-228ENST00000620916 ZNF580Q9UK33 172 aa3.57□□□□□ -1.84
MATR3-228ENST00000620916 PRRC2CQ9Y520 2896 aaKnown RBP3.57□□□□□ -1.84
MATR3-228ENST00000620916 POLR2KP53803 58 aaKnown RBP3.57□□□□□ -1.84
MATR3-228ENST00000620916 WFDC9Q8NEX5 89 aa3.57□□□□□ -1.84
MATR3-228ENST00000620916 SEC16AO15027 2179 aa3.56□□□□□ -1.84
MATR3-228ENST00000620916 INTS1Q8N201 2190 aaKnown RBP3.56□□□□□ -1.84
MATR3-228ENST00000620916 RTTNQ86VV8 2226 aa3.56□□□□□ -1.84
MATR3-228ENST00000620916 TRBV6-5A0A0K0K1A5 114 aa3.56□□□□□ -1.84
MATR3-228ENST00000620916 K7EQG2 157 aa3.56□□□□□ -1.84
MATR3-228ENST00000620916 IGKV1-16P04430 117 aa3.56□□□□□ -1.84
MATR3-228ENST00000620916 PRM2P04554 102 aa3.56□□□□□ -1.84
MATR3-228ENST00000620916 LINC01547P58512 204 aaPredicted RBP3.56□□□□□ -1.84
MATR3-228ENST00000620916 LOC110117498A0A087WWA1 95 aa3.56□□□□□ -1.84
MATR3-228ENST00000620916 IGHV3-20A0A0C4DH32 117 aa3.56□□□□□ -1.84
MATR3-228ENST00000620916 A0A1W2PPR1 153 aa3.56□□□□□ -1.84
MATR3-228ENST00000620916 TMEM167AQ8TBQ9 72 aa3.56□□□□□ -1.84
MATR3-228ENST00000620916 OCR1Q9BZK8 76 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms