RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 MIR7-3HGQ8N6C7 128 aa7.11□□□□□ -1.27
TNFAIP3-210ENST00000620204 WFDC11Q8NEX6 87 aa7.11□□□□□ -1.27
TNFAIP3-210ENST00000620204 C9orf129Q5T035 196 aaKnown RBP7.11□□□□□ -1.27
TNFAIP3-210ENST00000620204 C2orf48Q96LS8 159 aa7.11□□□□□ -1.27
TNFAIP3-210ENST00000620204 NDUFA1O15239 70 aa7.11□□□□□ -1.27
TNFAIP3-210ENST00000620204 C5orf38Q86SI9 138 aa7.11□□□□□ -1.27
TNFAIP3-210ENST00000620204 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.11□□□□□ -1.27
TNFAIP3-210ENST00000620204 CELSR1Q9NYQ6 3014 aa7.1□□□□□ -1.27
TNFAIP3-210ENST00000620204 A0A087WYN8 130 aa7.1□□□□□ -1.27
TNFAIP3-210ENST00000620204 Q6ZSN1 163 aa7.1□□□□□ -1.27
TNFAIP3-210ENST00000620204 ZNF843Q8N446 348 aa7.1□□□□□ -1.27
TNFAIP3-210ENST00000620204 C9orf85Q96MD7 179 aa7.1□□□□□ -1.27
TNFAIP3-210ENST00000620204 UBE2D4Q9Y2X8 147 aa7.1□□□□□ -1.27
TNFAIP3-210ENST00000620204 FLNBO75369 2602 aaKnown RBP7.1□□□□□ -1.27
TNFAIP3-210ENST00000620204 A0A0U1RQV1 116 aa7.1□□□□□ -1.27
TNFAIP3-210ENST00000620204 DEFB131AP59861 70 aa7.1□□□□□ -1.27
TNFAIP3-210ENST00000620204 ENHOQ6UWT2 76 aa7.1□□□□□ -1.27
TNFAIP3-210ENST00000620204 PYGO1Q9Y3Y4 419 aa7.1□□□□□ -1.27
TNFAIP3-210ENST00000620204 IGHG2P01859 326 aa7.09□□□□□ -1.27
TNFAIP3-210ENST00000620204 CFHR3Q02985 330 aa7.09□□□□□ -1.27
TNFAIP3-210ENST00000620204 UBE2L6O14933 153 aa7.09□□□□□ -1.27
TNFAIP3-210ENST00000620204 SIRPDQ9H106 197 aa7.09□□□□□ -1.27
TNFAIP3-210ENST00000620204 TRAV13-2A0A0B4J235 113 aa7.09□□□□□ -1.27
TNFAIP3-210ENST00000620204 RPS28P62857 69 aaKnown RBP7.09□□□□□ -1.27
TNFAIP3-210ENST00000620204 HAMPP81172 84 aa7.08□□□□□ -1.28
TNFAIP3-210ENST00000620204 FAM19A1Q7Z5A9 133 aa7.08□□□□□ -1.28
TNFAIP3-210ENST00000620204 USMG5Q96IX5 58 aa7.08□□□□□ -1.28
TNFAIP3-210ENST00000620204 UBE2E2Q96LR5 201 aa7.08□□□□□ -1.28
TNFAIP3-210ENST00000620204 OXTP01178 125 aa7.08□□□□□ -1.28
TNFAIP3-210ENST00000620204 C10orf99Q6UWK7 81 aa7.08□□□□□ -1.28
TNFAIP3-210ENST00000620204 PIMREGQ9BSJ6 248 aa7.08□□□□□ -1.28
TNFAIP3-210ENST00000620204 TRGV1A0A0A0MS02 117 aa7.07□□□□□ -1.28
TNFAIP3-210ENST00000620204 FHL2Q14192 279 aa7.07□□□□□ -1.28
TNFAIP3-210ENST00000620204 SMIM11BQ8TCY0 68 aa7.07□□□□□ -1.28
TNFAIP3-210ENST00000620204 SNURFQ9Y675 71 aa7.07□□□□□ -1.28
TNFAIP3-210ENST00000620204 CELSR2Q9HCU4 2923 aa7.07□□□□□ -1.28
TNFAIP3-210ENST00000620204 CHCHD7Q9BUK0 85 aa7.07□□□□□ -1.28
TNFAIP3-210ENST00000620204 LINC00242Q5T6M2 205 aa7.07□□□□□ -1.28
TNFAIP3-210ENST00000620204 LINC01561Q8N1V8 128 aa7.07□□□□□ -1.28
TNFAIP3-210ENST00000620204 TIMM17BO60830 172 aa7.06□□□□□ -1.28
TNFAIP3-210ENST00000620204 IGHV4-61A0A0C4DH41 118 aa7.06□□□□□ -1.28
TNFAIP3-210ENST00000620204 RBM3P98179 157 aaKnown RBP7.06□□□□□ -1.28
TNFAIP3-210ENST00000620204 C11orf71Q6IPW1 123 aa7.06□□□□□ -1.28
TNFAIP3-210ENST00000620204 LINC00337Q8N6G1 96 aa7.06□□□□□ -1.28
TNFAIP3-210ENST00000620204 LINC01600Q96MT4 127 aa7.06□□□□□ -1.28
TNFAIP3-210ENST00000620204 IGHV4-30-2A0A087WSY4 118 aa7.06□□□□□ -1.28
TNFAIP3-210ENST00000620204 XCL2Q9UBD3 114 aa7.06□□□□□ -1.28
TNFAIP3-210ENST00000620204 FAM236DA0A1B0GTK5 79 aa7.05□□□□□ -1.28
TNFAIP3-210ENST00000620204 FAM236CP0DP71 79 aa7.05□□□□□ -1.28
TNFAIP3-210ENST00000620204 RPL35AP18077 110 aaKnown RBP7.05□□□□□ -1.28
TNFAIP3-210ENST00000620204 BRK1Q8WUW1 75 aa7.05□□□□□ -1.28
TNFAIP3-210ENST00000620204 ZANQ9Y493 2812 aa7.05□□□□□ -1.28
TNFAIP3-210ENST00000620204 ZNF415Q09FC8 603 aa7.04□□□□□ -1.28
TNFAIP3-210ENST00000620204 Q6JHZ5 121 aa7.04□□□□□ -1.28
TNFAIP3-210ENST00000620204 APRG1Q8IVJ8 170 aa7.04□□□□□ -1.28
TNFAIP3-210ENST00000620204 SMIM1B2RUZ4 78 aa7.04□□□□□ -1.28
TNFAIP3-210ENST00000620204 IGHV4-38-2P0DP08 117 aa7.04□□□□□ -1.28
TNFAIP3-210ENST00000620204 FAM104AQ969W3 186 aa7.04□□□□□ -1.28
TNFAIP3-210ENST00000620204 ORMDL1Q9P0S3 153 aa7.04□□□□□ -1.28
TNFAIP3-210ENST00000620204 RPL28P46779 137 aaKnown RBP7.04□□□□□ -1.28
TNFAIP3-210ENST00000620204 UBL5Q9BZL1 73 aa7.04□□□□□ -1.28
TNFAIP3-210ENST00000620204 KRTAP10-9P60411 292 aa7.03□□□□□ -1.28
TNFAIP3-210ENST00000620204 PSMB8P28062 276 aa7.03□□□□□ -1.28
TNFAIP3-210ENST00000620204 FAM222AQ5U5X8 452 aa7.03□□□□□ -1.28
TNFAIP3-210ENST00000620204 LINC00336Q6ZUF6 198 aa7.03□□□□□ -1.28
TNFAIP3-210ENST00000620204 MRAPQ8TCY5 172 aa7.03□□□□□ -1.28
TNFAIP3-210ENST00000620204 DEFB136Q30KP8 78 aa7.02□□□□□ -1.29
TNFAIP3-210ENST00000620204 C6orf226Q5I0X4 101 aa7.02□□□□□ -1.29
TNFAIP3-210ENST00000620204 OVOL2Q9BRP0 275 aa7.02□□□□□ -1.29
TNFAIP3-210ENST00000620204 UPK3BQ9BT76 320 aa7.02□□□□□ -1.29
TNFAIP3-210ENST00000620204 LAMTOR3Q9UHA4 124 aa7.02□□□□□ -1.29
TNFAIP3-210ENST00000620204 H0YGX0 51 aa7.01□□□□□ -1.29
TNFAIP3-210ENST00000620204 MPLKIPQ8TAP9 179 aa7.01□□□□□ -1.29
TNFAIP3-210ENST00000620204 BEAN1Q3B7T3 259 aa7.01□□□□□ -1.29
TNFAIP3-210ENST00000620204 S100A7L2Q5SY68 101 aa7.01□□□□□ -1.29
TNFAIP3-210ENST00000620204 FLNAP21333 2647 aaKnown RBP7.01□□□□□ -1.29
TNFAIP3-210ENST00000620204 J3QLI3 93 aa7.01□□□□□ -1.29
TNFAIP3-210ENST00000620204 XCL1P47992 114 aa7.01□□□□□ -1.29
TNFAIP3-210ENST00000620204 PRR3P79522 188 aaKnown RBP7.01□□□□□ -1.29
TNFAIP3-210ENST00000620204 C22orf24Q9Y442 160 aa7.01□□□□□ -1.29
TNFAIP3-210ENST00000620204 K7EQG2 157 aa7□□□□□ -1.29
TNFAIP3-210ENST00000620204 COX7B2Q8TF08 81 aa7□□□□□ -1.29
TNFAIP3-210ENST00000620204 CSMD2Q7Z408 3487 aa7□□□□□ -1.29
TNFAIP3-210ENST00000620204 CCL18P55774 89 aa7□□□□□ -1.29
TNFAIP3-210ENST00000620204 LMO4P61968 165 aa7□□□□□ -1.29
TNFAIP3-210ENST00000620204 Q5XG85 94 aa7□□□□□ -1.29
TNFAIP3-210ENST00000620204 SCXQ7RTU7 201 aa7□□□□□ -1.29
TNFAIP3-210ENST00000620204 CLPSL2Q6UWE3 100 aa7□□□□□ -1.29
TNFAIP3-210ENST00000620204 DYNLRB2Q8TF09 96 aa7□□□□□ -1.29
TNFAIP3-210ENST00000620204 ITPR3Q14573 2671 aa7□□□□□ -1.29
TNFAIP3-210ENST00000620204 TRGV2A0A075B6R0 118 aa6.99□□□□□ -1.29
TNFAIP3-210ENST00000620204 NDUFC2O95298 119 aa6.99□□□□□ -1.29
TNFAIP3-210ENST00000620204 Q6ZTI0 123 aa6.99□□□□□ -1.29
TNFAIP3-210ENST00000620204 RMI2Q96E14 147 aa6.99□□□□□ -1.29
TNFAIP3-210ENST00000620204 HIVEP2P31629 2446 aa6.98□□□□□ -1.29
TNFAIP3-210ENST00000620204 WIPF1O43516 503 aa6.98□□□□□ -1.29
TNFAIP3-210ENST00000620204 ITPR2Q14571 2701 aa6.98□□□□□ -1.29
TNFAIP3-210ENST00000620204 IGKV2-28A0A075B6P5 120 aa6.98□□□□□ -1.29
TNFAIP3-210ENST00000620204 IGLV5-39A0A0G2JS06 123 aa6.98□□□□□ -1.29
TNFAIP3-210ENST00000620204 J3QKU1 62 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms