RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 TRAV26-1A0A087WT03 109 aa14.07□□□□□ -0.16
MMP28-207ENST00000619655 VSIG2Q96IQ7 327 aa14.07□□□□□ -0.16
MMP28-207ENST00000619655 NOTCH1P46531 2555 aa14.07□□□□□ -0.16
MMP28-207ENST00000619655 H7C423 109 aa14.07□□□□□ -0.16
MMP28-207ENST00000619655 TIRAPP58753 221 aa14.07□□□□□ -0.16
MMP28-207ENST00000619655 HERVK_113P63121 156 aa14.07□□□□□ -0.16
MMP28-207ENST00000619655 TMEM262E9PQX1 116 aa14.06□□□□□ -0.16
MMP28-207ENST00000619655 C10orf126Q8N4M7 172 aa14.05□□□□□ -0.16
MMP28-207ENST00000619655 C12orf74Q32Q52 190 aa14.04□□□□□ -0.16
MMP28-207ENST00000619655 IGLV5-45A0A087WSX0 123 aa14.03□□□□□ -0.16
MMP28-207ENST00000619655 NDUFA12Q9UI09 145 aa14.03□□□□□ -0.16
MMP28-207ENST00000619655 IGLL5B9A064 214 aa14.02□□□□□ -0.16
MMP28-207ENST00000619655 PRB2P02812 416 aaPredicted RBP14.02□□□□□ -0.17
MMP28-207ENST00000619655 RPL24P83731 157 aaKnown RBP14.02□□□□□ -0.17
MMP28-207ENST00000619655 DNAH3Q8TD57 4116 aa14.01□□□□□ -0.17
MMP28-207ENST00000619655 A0A0J9YXY3 114 aa14.01□□□□□ -0.17
MMP28-207ENST00000619655 TEX48A0A1B0GUV7 120 aa14.01□□□□□ -0.17
MMP28-207ENST00000619655 FAM19A3Q7Z5A8 133 aa14□□□□□ -0.17
MMP28-207ENST00000619655 SPANXB1Q9NS25 103 aaPredicted RBP14□□□□□ -0.17
MMP28-207ENST00000619655 A0A1B0GWB2 263 aa13.99□□□□□ -0.17
MMP28-207ENST00000619655 IGHV3-30P01768 117 aa13.99□□□□□ -0.17
MMP28-207ENST00000619655 IGHV3-30-5P0DP03 117 aa13.99□□□□□ -0.17
MMP28-207ENST00000619655 TMEM238LA0A1B0GVL6 79 aa13.98□□□□□ -0.17
MMP28-207ENST00000619655 A6NJY4 79 aa13.98□□□□□ -0.17
MMP28-207ENST00000619655 SMIM1B2RUZ4 78 aa13.98□□□□□ -0.17
MMP28-207ENST00000619655 TENM3Q9P273 2699 aa13.98□□□□□ -0.17
MMP28-207ENST00000619655 NBEAL1Q6ZS30 2694 aa13.98□□□□□ -0.17
MMP28-207ENST00000619655 SCGB1A1P11684 91 aa13.98□□□□□ -0.17
MMP28-207ENST00000619655 CLPSL2Q6UWE3 100 aa13.98□□□□□ -0.17
MMP28-207ENST00000619655 APOMO95445 188 aa13.97□□□□□ -0.17
MMP28-207ENST00000619655 ZFAND6Q6FIF0 208 aa13.97□□□□□ -0.17
MMP28-207ENST00000619655 F8W1H4 67 aa13.97□□□□□ -0.17
MMP28-207ENST00000619655 J3QR89 54 aa13.95□□□□□ -0.18
MMP28-207ENST00000619655 ZNF625Q96I27 306 aaPredicted RBP13.95□□□□□ -0.18
MMP28-207ENST00000619655 IGLV5-39A0A0G2JS06 123 aa13.95□□□□□ -0.18
MMP28-207ENST00000619655 MRPL23Q16540 153 aaKnown RBP13.95□□□□□ -0.18
MMP28-207ENST00000619655 Q8N3U1 123 aa13.95□□□□□ -0.18
MMP28-207ENST00000619655 NPC2P61916 151 aa13.94□□□□□ -0.18
MMP28-207ENST00000619655 Q9H8V8 135 aa13.94□□□□□ -0.18
MMP28-207ENST00000619655 ICOSQ9Y6W8 199 aa13.94□□□□□ -0.18
MMP28-207ENST00000619655 PRSS2P07478 247 aa13.93□□□□□ -0.18
MMP28-207ENST00000619655 MUSTN1Q8IVN3 82 aa13.93□□□□□ -0.18
MMP28-207ENST00000619655 SIGMAR1Q99720 223 aa13.93□□□□□ -0.18
MMP28-207ENST00000619655 ADAMTSL4-AS1Q5T5F5 129 aa13.93□□□□□ -0.18
MMP28-207ENST00000619655 LITAFQ99732 161 aa13.92□□□□□ -0.18
MMP28-207ENST00000619655 A0A0J9YWU9 116 aa13.92□□□□□ -0.18
MMP28-207ENST00000619655 LINC00959A0A1B0GUT2 108 aa13.92□□□□□ -0.18
MMP28-207ENST00000619655 NDUFA1O15239 70 aa13.92□□□□□ -0.18
MMP28-207ENST00000619655 Q6ZTC4 211 aa13.92□□□□□ -0.18
MMP28-207ENST00000619655 A0A1B0GUV1 79 aa13.91□□□□□ -0.18
MMP28-207ENST00000619655 DAND5Q8N907 189 aa13.91□□□□□ -0.18
MMP28-207ENST00000619655 PGPEP1Q9NXJ5 209 aa13.91□□□□□ -0.18
MMP28-207ENST00000619655 A0A0U1RRA0 63 aa13.91□□□□□ -0.18
MMP28-207ENST00000619655 A4D1N5 150 aa13.91□□□□□ -0.18
MMP28-207ENST00000619655 XCL1P47992 114 aa13.91□□□□□ -0.18
MMP28-207ENST00000619655 TOMM7Q9P0U1 55 aa13.91□□□□□ -0.18
MMP28-207ENST00000619655 WFDC2Q14508 124 aa13.9□□□□□ -0.18
MMP28-207ENST00000619655 C5orf38Q86SI9 138 aa13.9□□□□□ -0.18
MMP28-207ENST00000619655 H3BMG7 143 aa13.9□□□□□ -0.18
MMP28-207ENST00000619655 LINC00269Q8N2A0 174 aa13.9□□□□□ -0.18
MMP28-207ENST00000619655 GAGE12HA6NDE8 117 aa13.89□□□□□ -0.19
MMP28-207ENST00000619655 ANGP03950 147 aaKnown RBP13.89□□□□□ -0.19
MMP28-207ENST00000619655 CFC1BP0CG36 223 aa13.89□□□□□ -0.19
MMP28-207ENST00000619655 CFC1P0CG37 223 aa13.89□□□□□ -0.19
MMP28-207ENST00000619655 SFTA2Q6UW10 78 aa13.89□□□□□ -0.19
MMP28-207ENST00000619655 MRAPQ8TCY5 172 aa13.89□□□□□ -0.19
MMP28-207ENST00000619655 IGHV3OR16-9A0A0B4J2B5 98 aa13.88□□□□□ -0.19
MMP28-207ENST00000619655 SPATA25Q9BR10 227 aa13.88□□□□□ -0.19
MMP28-207ENST00000619655 DEFB121Q5J5C9 76 aa13.87□□□□□ -0.19
MMP28-207ENST00000619655 NANOS2P60321 138 aaKnown RBP13.87□□□□□ -0.19
MMP28-207ENST00000619655 SS18Q15532 418 aa13.87□□□□□ -0.19
MMP28-207ENST00000619655 C11orf68Q9H3H3 251 aaKnown RBP13.87□□□□□ -0.19
MMP28-207ENST00000619655 MGAM2Q2M2H8 2515 aa13.87□□□□□ -0.19
MMP28-207ENST00000619655 MIAQ16674 131 aa13.86□□□□□ -0.19
MMP28-207ENST00000619655 IGLV10-54A0A075B6I4 117 aa13.85□□□□□ -0.19
MMP28-207ENST00000619655 MEIG1Q5JSS6 88 aa13.85□□□□□ -0.19
MMP28-207ENST00000619655 COX7B2Q8TF08 81 aa13.85□□□□□ -0.19
MMP28-207ENST00000619655 SPANXDQ9BXN6 97 aa13.85□□□□□ -0.19
MMP28-207ENST00000619655 SPANXCQ9NY87 97 aa13.85□□□□□ -0.19
MMP28-207ENST00000619655 TSPAN13O95857 204 aa13.85□□□□□ -0.19
MMP28-207ENST00000619655 CIRBPQ14011 172 aaKnown RBP13.85□□□□□ -0.19
MMP28-207ENST00000619655 LELP1Q5T871 98 aa13.85□□□□□ -0.19
MMP28-207ENST00000619655 SH2D6Q7Z4S9 175 aa13.85□□□□□ -0.19
MMP28-207ENST00000619655 ETDBQ3ZM63 59 aa13.84□□□□□ -0.19
MMP28-207ENST00000619655 KPRPQ5T749 579 aaPredicted RBP13.84□□□□□ -0.19
MMP28-207ENST00000619655 MDFIQ99750 246 aa13.84□□□□□ -0.19
MMP28-207ENST00000619655 A0A087WZ39 114 aa13.84□□□□□ -0.19
MMP28-207ENST00000619655 C11orf45Q8TAV5 145 aa13.84□□□□□ -0.19
MMP28-207ENST00000619655 PRO0461Q9UI25 63 aa13.84□□□□□ -0.19
MMP28-207ENST00000619655 K7EIL1 84 aa13.83□□□□□ -0.2
MMP28-207ENST00000619655 H7C2G1 150 aa13.82□□□□□ -0.2
MMP28-207ENST00000619655 EIF4EBP3O60516 100 aaPredicted RBP13.82□□□□□ -0.2
MMP28-207ENST00000619655 REG3AQ06141 175 aa13.82□□□□□ -0.2
MMP28-207ENST00000619655 LYPD5Q6UWN5 251 aa13.82□□□□□ -0.2
MMP28-207ENST00000619655 PRO1854Q9UHT4 67 aa13.82□□□□□ -0.2
MMP28-207ENST00000619655 LOC107984156A0A0G2JMH3 177 aa13.81□□□□□ -0.2
MMP28-207ENST00000619655 A0A1B0GV72 72 aa13.81□□□□□ -0.2
MMP28-207ENST00000619655 TIMM17BO60830 172 aa13.81□□□□□ -0.2
MMP28-207ENST00000619655 ARL17AQ8IVW1 177 aa13.81□□□□□ -0.2
MMP28-207ENST00000619655 DEFB131BA0A096LNP1 70 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms