RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 UBE2L6O14933 153 aa8.79□□□□□ -1
CIITA-212ENST00000618207 IGHV3-30P01768 117 aa8.79□□□□□ -1
CIITA-212ENST00000618207 IGHV3-30-5P0DP03 117 aa8.79□□□□□ -1
CIITA-212ENST00000618207 MAST4O15021 2626 aa8.79□□□□□ -1
CIITA-212ENST00000618207 TRBV10-1A0A0K0K1A3 114 aa8.79□□□□□ -1
CIITA-212ENST00000618207 UBE2D1P51668 147 aa8.79□□□□□ -1
CIITA-212ENST00000618207 MEIG1Q5JSS6 88 aa8.79□□□□□ -1
CIITA-212ENST00000618207 DAZ4Q86SG3 579 aaKnown RBP8.78□□□□□ -1
CIITA-212ENST00000618207 DAND5Q8N907 189 aa8.78□□□□□ -1
CIITA-212ENST00000618207 ATP6V0E2Q8NHE4 81 aa8.78□□□□□ -1
CIITA-212ENST00000618207 DAZ3Q9NR90 486 aaKnown RBP8.78□□□□□ -1
CIITA-212ENST00000618207 NDUFA12Q9UI09 145 aa8.78□□□□□ -1
CIITA-212ENST00000618207 A0A0J9YXY3 114 aa8.78□□□□□ -1
CIITA-212ENST00000618207 TINCRA0A1B0GVN0 87 aa8.78□□□□□ -1
CIITA-212ENST00000618207 MUSTN1Q8IVN3 82 aa8.78□□□□□ -1
CIITA-212ENST00000618207 TRBV20-1A0A075B6N2 111 aa8.77□□□□□ -1
CIITA-212ENST00000618207 IGHV1-58A0A0C4DH39 117 aa8.77□□□□□ -1
CIITA-212ENST00000618207 FHL2Q14192 279 aa8.77□□□□□ -1
CIITA-212ENST00000618207 C9orf66Q5T8R8 295 aa8.77□□□□□ -1
CIITA-212ENST00000618207 CFC1BP0CG36 223 aa8.77□□□□□ -1.01
CIITA-212ENST00000618207 CFC1P0CG37 223 aa8.77□□□□□ -1.01
CIITA-212ENST00000618207 IFITM1P13164 125 aa8.76□□□□□ -1.01
CIITA-212ENST00000618207 MRAPQ8TCY5 172 aa8.76□□□□□ -1.01
CIITA-212ENST00000618207 VSIG2Q96IQ7 327 aa8.76□□□□□ -1.01
CIITA-212ENST00000618207 OVOL2Q9BRP0 275 aa8.76□□□□□ -1.01
CIITA-212ENST00000618207 TMEM243Q9BU79 118 aa8.76□□□□□ -1.01
CIITA-212ENST00000618207 A0A1B0GWB2 263 aa8.76□□□□□ -1.01
CIITA-212ENST00000618207 TTC32Q5I0X7 151 aa8.76□□□□□ -1.01
CIITA-212ENST00000618207 LINC00242Q5T6M2 205 aa8.76□□□□□ -1.01
CIITA-212ENST00000618207 CHCHD5Q9BSY4 110 aa8.76□□□□□ -1.01
CIITA-212ENST00000618207 PRO0461Q9UI25 63 aa8.76□□□□□ -1.01
CIITA-212ENST00000618207 ADAMTSL4-AS1Q5T5F5 129 aa8.76□□□□□ -1.01
CIITA-212ENST00000618207 GAGE2BQ13066 116 aa8.75□□□□□ -1.01
CIITA-212ENST00000618207 GAGE2EQ4V326 116 aa8.75□□□□□ -1.01
CIITA-212ENST00000618207 GAGE2DQ9UEU5 116 aa8.75□□□□□ -1.01
CIITA-212ENST00000618207 X6R8D5 127 aa8.75□□□□□ -1.01
CIITA-212ENST00000618207 TRBV6-4A0A1B0GX49 114 aa8.75□□□□□ -1.01
CIITA-212ENST00000618207 FAM222AQ5U5X8 452 aa8.75□□□□□ -1.01
CIITA-212ENST00000618207 FAM19A5Q7Z5A7 132 aaPredicted RBP8.75□□□□□ -1.01
CIITA-212ENST00000618207 PKD1L1Q8TDX9 2849 aa8.75□□□□□ -1.01
CIITA-212ENST00000618207 TMEM101Q96IK0 257 aa8.75□□□□□ -1.01
CIITA-212ENST00000618207 GYPEP15421 78 aa8.74□□□□□ -1.01
CIITA-212ENST00000618207 PSMB2P49721 201 aa8.74□□□□□ -1.01
CIITA-212ENST00000618207 OR13C6PQ8NH95 151 aa8.74□□□□□ -1.01
CIITA-212ENST00000618207 CDC42SE2Q9NRR3 84 aa8.74□□□□□ -1.01
CIITA-212ENST00000618207 IGLV4-60A0A075B6I1 120 aa8.73□□□□□ -1.01
CIITA-212ENST00000618207 LOC107984640A0A0U1RRK4 108 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 TMEM262E9PQX1 116 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
CIITA-212ENST00000618207 HTN3P15516 51 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 CLPSL2Q6UWE3 100 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 SBSPONQ8IVN8 264 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 KIR2DL5BQ8NHK3 375 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 NOTCH1P46531 2555 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 SCGB1C2P0DMR2 95 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 Q1RN00 199 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 Q9H8V8 135 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 HERVK_113P63121 156 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 OXLD1Q5BKU9 147 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 TOMM7Q9P0U1 55 aa8.72□□□□□ -1.01
CIITA-212ENST00000618207 FBN1P35555 2871 aaKnown RBP8.71□□□□□ -1.01
CIITA-212ENST00000618207 TRBV6-8A0A0A6YYG3 113 aa8.71□□□□□ -1.02
CIITA-212ENST00000618207 J3KT08 172 aa8.71□□□□□ -1.02
CIITA-212ENST00000618207 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.02
CIITA-212ENST00000618207 MRPL23Q16540 153 aaKnown RBP8.71□□□□□ -1.02
CIITA-212ENST00000618207 LITAFQ99732 161 aa8.71□□□□□ -1.02
CIITA-212ENST00000618207 TIRAPP58753 221 aa8.7□□□□□ -1.02
CIITA-212ENST00000618207 Q6Q795 121 aa8.7□□□□□ -1.02
CIITA-212ENST00000618207 C9JAW5 83 aa8.7□□□□□ -1.02
CIITA-212ENST00000618207 COL6A5A8TX70 2615 aa8.7□□□□□ -1.02
CIITA-212ENST00000618207 IGHV4-28A0A0C4DH34 117 aa8.69□□□□□ -1.02
CIITA-212ENST00000618207 SMIM1B2RUZ4 78 aa8.69□□□□□ -1.02
CIITA-212ENST00000618207 CELA1Q9UNI1 258 aa8.69□□□□□ -1.02
CIITA-212ENST00000618207 SEC61GP60059 68 aa8.68□□□□□ -1.02
CIITA-212ENST00000618207 C5orf38Q86SI9 138 aa8.68□□□□□ -1.02
CIITA-212ENST00000618207 PRIMA1Q86XR5 153 aa8.68□□□□□ -1.02
CIITA-212ENST00000618207 PPDPFLQ8WWR9 84 aa8.68□□□□□ -1.02
CIITA-212ENST00000618207 PAX4O43316 350 aa8.67□□□□□ -1.02
CIITA-212ENST00000618207 SNCGO76070 127 aa8.67□□□□□ -1.02
CIITA-212ENST00000618207 IGHV4-30-4P0DP06 118 aa8.67□□□□□ -1.02
CIITA-212ENST00000618207 C11orf68Q9H3H3 251 aaKnown RBP8.67□□□□□ -1.02
CIITA-212ENST00000618207 IGLV5-45A0A087WSX0 123 aa8.67□□□□□ -1.02
CIITA-212ENST00000618207 A0A1B0GX51 115 aa8.67□□□□□ -1.02
CIITA-212ENST00000618207 TCL1BO95988 128 aa8.67□□□□□ -1.02
CIITA-212ENST00000618207 APOC4P55056 127 aa8.67□□□□□ -1.02
CIITA-212ENST00000618207 DAD1P61803 113 aa8.67□□□□□ -1.02
CIITA-212ENST00000618207 Q8N3U1 123 aa8.67□□□□□ -1.02
CIITA-212ENST00000618207 PRO0255Q9UI72 69 aa8.67□□□□□ -1.02
CIITA-212ENST00000618207 IGHV3-33P01772 117 aa8.66□□□□□ -1.02
CIITA-212ENST00000618207 MIAQ16674 131 aa8.66□□□□□ -1.02
CIITA-212ENST00000618207 NDUFA1O15239 70 aa8.65□□□□□ -1.03
CIITA-212ENST00000618207 XCL1P47992 114 aa8.65□□□□□ -1.03
CIITA-212ENST00000618207 C3orf56Q8N813 242 aa8.65□□□□□ -1.03
CIITA-212ENST00000618207 BAHCC1Q9P281 2608 aa8.65□□□□□ -1.03
CIITA-212ENST00000618207 IGLV5-39A0A0G2JS06 123 aa8.64□□□□□ -1.03
CIITA-212ENST00000618207 CARD19Q96LW7 228 aa8.64□□□□□ -1.03
CIITA-212ENST00000618207 RETNQ9HD89 108 aa8.64□□□□□ -1.03
CIITA-212ENST00000618207 SMCPP49901 116 aaPredicted RBP8.64□□□□□ -1.03
CIITA-212ENST00000618207 RPS28P62857 69 aaKnown RBP8.64□□□□□ -1.03
CIITA-212ENST00000618207 TENM3Q9P273 2699 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms