RNA–Protein interactions for RNA: ENST00000617399.1

NBR1-208, Transcript of NBR1, autophagy cargo receptor, humanhuman

Gene NBR1, Length 63 nt, Biotype misc RNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-208ENST00000617399 VPS13BQ7Z7G8 4022 aa-3.33□□□□□ -2.94
NBR1-208ENST00000617399 SETBP1Q9Y6X0 1596 aa-3.33□□□□□ -2.94
NBR1-208ENST00000617399 DISP2A7MBM2 1401 aa-3.33□□□□□ -2.94
NBR1-208ENST00000617399 ARPC5O15511 151 aa-3.33□□□□□ -2.94
NBR1-208ENST00000617399 SCIMPQ6UWF3 145 aa-3.33□□□□□ -2.94
NBR1-208ENST00000617399 AIF1LQ9BQI0 150 aa-3.34□□□□□ -2.94
NBR1-208ENST00000617399 H1FX-AS1Q4G0G2 97 aa-3.35□□□□□ -2.95
NBR1-208ENST00000617399 C10orf113Q5VZT2 155 aa-3.35□□□□□ -2.95
NBR1-208ENST00000617399 TMEM263Q8WUH6 116 aaKnown RBP-3.35□□□□□ -2.95
NBR1-208ENST00000617399 ZFHX3Q15911 3703 aa-3.35□□□□□ -2.95
NBR1-208ENST00000617399 DMXL1Q9Y485 3027 aa-3.36□□□□□ -2.95
NBR1-208ENST00000617399 TSPAN19P0C672 248 aa-3.37□□□□□ -2.95
NBR1-208ENST00000617399 DNAH11Q96DT5 4516 aa-3.37□□□□□ -2.95
NBR1-208ENST00000617399 REV3LO60673 3130 aa-3.38□□□□□ -2.95
NBR1-208ENST00000617399 DYNLRB1Q9NP97 96 aa-3.38□□□□□ -2.95
NBR1-208ENST00000617399 PRG4Q92954 1404 aaPredicted RBP-3.38□□□□□ -2.95
NBR1-208ENST00000617399 ACACAQ13085 2346 aa-3.38□□□□□ -2.95
NBR1-208ENST00000617399 PLECQ15149 4684 aaKnown RBP-3.38□□□□□ -2.95
NBR1-208ENST00000617399 TRBV7-3A0A075B6L6 115 aa-3.39□□□□□ -2.95
NBR1-208ENST00000617399 MAGI1Q96QZ7 1491 aaPredicted RBP-3.4□□□□□ -2.95
NBR1-208ENST00000617399 SFT2D2O95562 160 aa-3.4□□□□□ -2.95
NBR1-208ENST00000617399 NBEAP1P0C6P0 100 aa-3.4□□□□□ -2.95
NBR1-208ENST00000617399 ADAMTS12P58397 1594 aa-3.4□□□□□ -2.95
NBR1-208ENST00000617399 SMIM15Q7Z3B0 74 aa-3.4□□□□□ -2.95
NBR1-208ENST00000617399 MGST2Q99735 147 aa-3.4□□□□□ -2.95
NBR1-208ENST00000617399 SMIM3Q9BZL3 60 aa-3.4□□□□□ -2.95
NBR1-208ENST00000617399 PSME4Q14997 1843 aa-3.4□□□□□ -2.95
NBR1-208ENST00000617399 COL4A6Q14031 1691 aa-3.4□□□□□ -2.95
NBR1-208ENST00000617399 NIPBLQ6KC79 2804 aaeCLIP-3.4□□□□□ -2.95
NBR1-208ENST00000617399 ANKRD11Q6UB99 2663 aaPredicted RBP-3.4□□□□□ -2.95
NBR1-208ENST00000617399 PTPN23Q9H3S7 1636 aa-3.41□□□□□ -2.95
NBR1-208ENST00000617399 APOBP04114 4563 aaKnown RBP-3.41□□□□□ -2.95
NBR1-208ENST00000617399 J3QR89 54 aa-3.41□□□□□ -2.96
NBR1-208ENST00000617399 HMGN4O00479 90 aa-3.41□□□□□ -2.96
NBR1-208ENST00000617399 KCNRGQ8N5I3 272 aa-3.41□□□□□ -2.96
NBR1-208ENST00000617399 SPANXA1Q9NS26 97 aa-3.41□□□□□ -2.96
NBR1-208ENST00000617399 MGPP08493 103 aa-3.42□□□□□ -2.96
NBR1-208ENST00000617399 GUCA1AP43080 201 aaPredicted RBP-3.42□□□□□ -2.96
NBR1-208ENST00000617399 SPRR4Q96PI1 79 aa-3.43□□□□□ -2.96
NBR1-208ENST00000617399 ANKRD30AQ9BXX3 1397 aa-3.43□□□□□ -2.96
NBR1-208ENST00000617399 PIGBOS1A0A0B4J2F0 54 aa-3.44□□□□□ -2.96
NBR1-208ENST00000617399 H0YGG7 62 aa-3.44□□□□□ -2.96
NBR1-208ENST00000617399 NEFHP12036 1026 aa-3.44□□□□□ -2.96
NBR1-208ENST00000617399 Q8N8P6 123 aa-3.44□□□□□ -2.96
NBR1-208ENST00000617399 FDCSPQ8NFU4 85 aa-3.44□□□□□ -2.96
NBR1-208ENST00000617399 SLIT1O75093 1534 aa-3.44□□□□□ -2.96
NBR1-208ENST00000617399 RYR2Q92736 4967 aa-3.45□□□□□ -2.96
NBR1-208ENST00000617399 K7ERU9 68 aa-3.45□□□□□ -2.96
NBR1-208ENST00000617399 TSLPQ969D9 159 aa-3.45□□□□□ -2.96
NBR1-208ENST00000617399 LINC01600Q96MT4 127 aa-3.45□□□□□ -2.96
NBR1-208ENST00000617399 TROQ12816 1431 aaPredicted RBP-3.45□□□□□ -2.96
NBR1-208ENST00000617399 TRANK1O15050 2925 aa-3.46□□□□□ -2.96
NBR1-208ENST00000617399 SSSCA1O60232 199 aa-3.47□□□□□ -2.96
NBR1-208ENST00000617399 B2MP61769 119 aa-3.47□□□□□ -2.96
NBR1-208ENST00000617399 UBA52P62987 128 aaKnown RBP-3.47□□□□□ -2.96
NBR1-208ENST00000617399 ANK3Q12955 4377 aaKnown RBP-3.47□□□□□ -2.97
NBR1-208ENST00000617399 KALRNO60229 2985 aa-3.48□□□□□ -2.97
NBR1-208ENST00000617399 LOC285095A0A1B0GVY8 99 aa-3.48□□□□□ -2.97
NBR1-208ENST00000617399 M0R2Z0 102 aa-3.48□□□□□ -2.97
NBR1-208ENST00000617399 CRIPTQ9P021 101 aa-3.48□□□□□ -2.97
NBR1-208ENST00000617399 LAMA3Q16787 3333 aa-3.49□□□□□ -2.97
NBR1-208ENST00000617399 MRPL54Q6P161 138 aaKnown RBP-3.49□□□□□ -2.97
NBR1-208ENST00000617399 MGAM2Q2M2H8 2515 aa-3.5□□□□□ -2.97
NBR1-208ENST00000617399 IGLC1P0CG04 106 aa-3.5□□□□□ -2.97
NBR1-208ENST00000617399 GSKIPQ9P0R6 139 aa-3.5□□□□□ -2.97
NBR1-208ENST00000617399 MYOM1P52179 1685 aa-3.51□□□□□ -2.97
NBR1-208ENST00000617399 FAIMQ9NVQ4 179 aa-3.51□□□□□ -2.97
NBR1-208ENST00000617399 TEX15Q9BXT5 2789 aa-3.51□□□□□ -2.97
NBR1-208ENST00000617399 RNF213Q63HN8 5207 aa-3.51□□□□□ -2.97
NBR1-208ENST00000617399 NKTRP30414 1462 aaKnown RBP-3.52□□□□□ -2.97
NBR1-208ENST00000617399 H3BNG1 76 aa-3.52□□□□□ -2.97
NBR1-208ENST00000617399 HIST1H1DP16402 221 aaKnown RBP-3.52□□□□□ -2.97
NBR1-208ENST00000617399 A0A0G2JMZ2 1700 aa-3.53□□□□□ -2.97
NBR1-208ENST00000617399 S100A5P33763 92 aa-3.53□□□□□ -2.97
NBR1-208ENST00000617399 UBE2D3P61077 147 aa-3.53□□□□□ -2.97
NBR1-208ENST00000617399 UBE2D2P62837 147 aa-3.53□□□□□ -2.97
NBR1-208ENST00000617399 LCN9Q8WX39 176 aa-3.53□□□□□ -2.97
NBR1-208ENST00000617399 NXT2Q9NPJ8 142 aaKnown RBP-3.53□□□□□ -2.97
NBR1-208ENST00000617399 ARHGEF5Q12774 1597 aa-3.54□□□□□ -2.98
NBR1-208ENST00000617399 GNG14A0A1W2PPG7 69 aa-3.54□□□□□ -2.98
NBR1-208ENST00000617399 C12orf73Q69YU5 71 aa-3.54□□□□□ -2.98
NBR1-208ENST00000617399 DPH3Q96FX2 82 aa-3.54□□□□□ -2.98
NBR1-208ENST00000617399 FAM167A-AS1Q96KT0 104 aa-3.54□□□□□ -2.98
NBR1-208ENST00000617399 FHAD1B1AJZ9 1412 aa-3.54□□□□□ -2.98
NBR1-208ENST00000617399 CKS1BP61024 79 aa-3.56□□□□□ -2.98
NBR1-208ENST00000617399 TET3O43151 1660 aa-3.56□□□□□ -2.98
NBR1-208ENST00000617399 MARF1Q9Y4F3 1742 aaKnown RBP-3.56□□□□□ -2.98
NBR1-208ENST00000617399 C1orf167Q5SNV9 1468 aa-3.57□□□□□ -2.98
NBR1-208ENST00000617399 LSM10Q969L4 123 aaKnown RBP-3.57□□□□□ -2.98
NBR1-208ENST00000617399 PDE4DIPQ5VU43 2346 aa-3.58□□□□□ -2.98
NBR1-208ENST00000617399 PKD1L2Q7Z442 2459 aa-3.58□□□□□ -2.98
NBR1-208ENST00000617399 XRN1Q8IZH2 1706 aaKnown RBP-3.58□□□□□ -2.98
NBR1-208ENST00000617399 TCHHQ07283 1943 aa-3.59□□□□□ -2.98
NBR1-208ENST00000617399 I3L3M4 83 aa-3.59□□□□□ -2.98
NBR1-208ENST00000617399 COPZ1P61923 177 aa-3.59□□□□□ -2.98
NBR1-208ENST00000617399 SMCO1Q147U7 214 aa-3.59□□□□□ -2.98
NBR1-208ENST00000617399 WHAMMP3Q1A5X7 153 aa-3.59□□□□□ -2.98
NBR1-208ENST00000617399 FAM223AQ8IWN6 122 aa-3.59□□□□□ -2.98
NBR1-208ENST00000617399 TMEM191AQ9H0A3 160 aa-3.59□□□□□ -2.98
NBR1-208ENST00000617399 PRO1933Q9H354 126 aa-3.59□□□□□ -2.98
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms