RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 C3orf79P0CE67 100 aa1.37□□□□□ -2.19
HMGB1P24-202ENST00000615653 RPL37AP61513 92 aaKnown RBP1.37□□□□□ -2.19
HMGB1P24-202ENST00000615653 COX17Q14061 63 aa1.37□□□□□ -2.19
HMGB1P24-202ENST00000615653 DEFB132Q7Z7B7 95 aa1.37□□□□□ -2.19
HMGB1P24-202ENST00000615653 SMIM4Q8WVI0 70 aa1.37□□□□□ -2.19
HMGB1P24-202ENST00000615653 TTTY12Q9BZ98 90 aa1.37□□□□□ -2.19
HMGB1P24-202ENST00000615653 DIDO1Q9BTC0 2240 aaKnown RBP1.37□□□□□ -2.19
HMGB1P24-202ENST00000615653 MED12LQ86YW9 2145 aa1.37□□□□□ -2.19
HMGB1P24-202ENST00000615653 FMN2Q9NZ56 1722 aa1.37□□□□□ -2.19
HMGB1P24-202ENST00000615653 PIK3C2BO00750 1634 aa1.37□□□□□ -2.19
HMGB1P24-202ENST00000615653 ARHGAP32A7KAX9 2087 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 AGLP35573 1532 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 ATP7AQ04656 1500 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 MYOM1P52179 1685 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 EXPH5Q8NEV8 1989 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 ZGRF1Q86YA3 2104 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 TRBV6-5A0A0K0K1A5 114 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 A0A1B0GUT8 65 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 M0R2N4 97 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 NDUFB1O75438 58 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 CCL18P55774 89 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 ATXN8Q156A1 80 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 TPRXLQ17RH7 258 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 CDC42BPGQ6DT37 1551 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 IGFL1Q6UW32 110 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 COA5Q86WW8 74 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 TXNDC17Q9BRA2 123 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 LINC00846Q9NV44 126 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 NRXN2Q9P2S2 1712 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 PARP4Q9UKK3 1724 aaKnown RBP1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 DLG5Q8TDM6 1919 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 RAPGEF6Q8TEU7 1601 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 MRC1P22897 1456 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 NUMA1Q14980 2115 aa1.36□□□□□ -2.19
HMGB1P24-202ENST00000615653 COL4A6Q14031 1691 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 ASXL1Q8IXJ9 1541 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 RGPD1P0DJD0 1748 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 STRCP1A6NGW2 1772 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 LOC110117498A0A087WWA1 95 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 IGKV3D-7A0A0C4DH55 119 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 IGKV3OR2-268A0A0C4DH90 116 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 SNRPGP15A8MWD9 76 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 M0R3E3 92 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 IGLV3-19P01714 112 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 RNASE3P12724 160 aaKnown RBP1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 HMGA1P17096 107 aaKnown RBP1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 FXYD4P59646 89 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 FXYD3Q14802 87 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 ZNF563Q8TA94 476 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 SPACA4Q8TDM5 124 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 WFDC6Q9BQY6 131 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 HEATR1Q9H583 2144 aaKnown RBP1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 UBE2D4Q9Y2X8 147 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 HILPDAQ9Y5L2 63 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 KIAA0556O60303 1618 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 RALGAPBQ86X10 1494 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 KIAA0586Q9BVV6 1533 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 MYOFQ9NZM1 2061 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 NUP188Q5SRE5 1749 aa1.35□□□□□ -2.19
HMGB1P24-202ENST00000615653 NWD1Q149M9 1564 aa1.34□□□□□ -2.19
HMGB1P24-202ENST00000615653 BTAF1O14981 1849 aa1.34□□□□□ -2.19
HMGB1P24-202ENST00000615653 LTBP2Q14767 1821 aa1.34□□□□□ -2.19
HMGB1P24-202ENST00000615653 IGKV2-29A2NJV5 120 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P24-202ENST00000615653 IL9P15248 144 aa1.34□□□□□ -2.19
HMGB1P24-202ENST00000615653 KRTAP13-2Q52LG2 175 aa1.34□□□□□ -2.19
HMGB1P24-202ENST00000615653 GDF5OSQ5U4N7 250 aa1.34□□□□□ -2.19
HMGB1P24-202ENST00000615653 MROH2AA6NES4 1674 aa1.34□□□□□ -2.19
HMGB1P24-202ENST00000615653 DDX60Q8IY21 1712 aaKnown RBP1.34□□□□□ -2.2
HMGB1P24-202ENST00000615653 NFAT5O94916 1531 aa1.34□□□□□ -2.2
HMGB1P24-202ENST00000615653 ADGRB2O60241 1585 aa1.34□□□□□ -2.2
HMGB1P24-202ENST00000615653 ADAMTS7Q9UKP4 1686 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 C1orf167Q5SNV9 1468 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 UBR1Q8IWV7 1749 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 CAV3P56539 151 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 HCP5Q6MZN7 132 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 Q6ZQY7 126 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 C5orf56Q8N8D9 126 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 FAM103A1Q9BTL3 118 aaKnown RBP1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 SIPA1L3O60292 1781 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 DLEC1Q9Y238 1755 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 GLI2P10070 1586 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 VWDEQ8N2E2 1590 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 SIP14410 1827 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 MPDZO75970 2070 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 GBF1Q92538 1859 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 ALKQ9UM73 1620 aa1.33□□□□□ -2.2
HMGB1P24-202ENST00000615653 RP1P56715 2156 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 COL4A5P29400 1685 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 C4AP0C0L4 1744 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 C4BP0C0L5 1744 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 TULP4Q9NRJ4 1543 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 TSC2P49815 1807 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 TRGV2A0A075B6R0 118 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 A0A087WVE0 104 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 FXYD6-FXYD2A0A087WZ82 144 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 TRAV1-2A0A0B4J238 106 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 NBDYA0A0U1RRE5 68 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 C10orf142B7Z368 130 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 H0Y9P7 68 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms