RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 C11orf86A6NJI1 115 aa7.72□□□□□ -1.17
SLIRP-212ENST00000613856 RTL8CO15255 209 aa7.72□□□□□ -1.17
SLIRP-212ENST00000613856 IGHV3-30P01768 117 aa7.72□□□□□ -1.17
SLIRP-212ENST00000613856 IGHV3-33P01772 117 aa7.72□□□□□ -1.17
SLIRP-212ENST00000613856 IGHV3-30-3P0DP02 117 aa7.72□□□□□ -1.17
SLIRP-212ENST00000613856 IGHV3-30-5P0DP03 117 aa7.72□□□□□ -1.17
SLIRP-212ENST00000613856 REG3AQ06141 175 aa7.72□□□□□ -1.17
SLIRP-212ENST00000613856 LINC00269Q8N2A0 174 aa7.72□□□□□ -1.17
SLIRP-212ENST00000613856 CHAC1Q9BUX1 264 aa7.72□□□□□ -1.17
SLIRP-212ENST00000613856 IGLV5-45A0A087WSX0 123 aa7.71□□□□□ -1.18
SLIRP-212ENST00000613856 TRAV13-1A0A0B4J241 112 aa7.71□□□□□ -1.18
SLIRP-212ENST00000613856 A0A0J9YXV3 536 aa7.71□□□□□ -1.18
SLIRP-212ENST00000613856 LINC00959A0A1B0GUT2 108 aa7.71□□□□□ -1.18
SLIRP-212ENST00000613856 HERVK_113P63121 156 aa7.71□□□□□ -1.18
SLIRP-212ENST00000613856 LINC00242Q5T6M2 205 aa7.71□□□□□ -1.18
SLIRP-212ENST00000613856 C10orf126Q8N4M7 172 aa7.71□□□□□ -1.18
SLIRP-212ENST00000613856 KLK12Q9UKR0 248 aa7.71□□□□□ -1.18
SLIRP-212ENST00000613856 CRPP02741 224 aa7.7□□□□□ -1.18
SLIRP-212ENST00000613856 SS18Q15532 418 aa7.7□□□□□ -1.18
SLIRP-212ENST00000613856 MIAQ16674 131 aa7.7□□□□□ -1.18
SLIRP-212ENST00000613856 CDPF1Q6NVV7 123 aa7.7□□□□□ -1.18
SLIRP-212ENST00000613856 Q9H8V8 135 aa7.7□□□□□ -1.18
SLIRP-212ENST00000613856 HERC1Q15751 4861 aa7.69□□□□□ -1.18
SLIRP-212ENST00000613856 TRAV9-2A0A087WT02 112 aa7.69□□□□□ -1.18
SLIRP-212ENST00000613856 TRAV8-4A0A0B4J246 113 aa7.69□□□□□ -1.18
SLIRP-212ENST00000613856 IGKV3OR2-268A0A0C4DH90 116 aa7.69□□□□□ -1.18
SLIRP-212ENST00000613856 M0R2N4 97 aa7.69□□□□□ -1.18
SLIRP-212ENST00000613856 ZNF22P17026 224 aaPredicted RBP7.69□□□□□ -1.18
SLIRP-212ENST00000613856 CLPSL2Q6UWE3 100 aa7.69□□□□□ -1.18
SLIRP-212ENST00000613856 ENHOQ6UWT2 76 aa7.69□□□□□ -1.18
SLIRP-212ENST00000613856 LINC00336Q6ZUF6 198 aa7.69□□□□□ -1.18
SLIRP-212ENST00000613856 ATOH7Q8N100 152 aa7.69□□□□□ -1.18
SLIRP-212ENST00000613856 GEMIN7Q9H840 131 aaKnown RBP7.69□□□□□ -1.18
SLIRP-212ENST00000613856 IBA57-AS1B1ANH7 110 aa7.68□□□□□ -1.18
SLIRP-212ENST00000613856 LINC00518Q8N0U6 118 aa7.68□□□□□ -1.18
SLIRP-212ENST00000613856 UBE2WQ96B02 151 aa7.68□□□□□ -1.18
SLIRP-212ENST00000613856 VAMP8Q9BV40 100 aa7.68□□□□□ -1.18
SLIRP-212ENST00000613856 IGHV3OR16-9A0A0B4J2B5 98 aa7.67□□□□□ -1.18
SLIRP-212ENST00000613856 HSBP1L1C9JCN9 74 aa7.67□□□□□ -1.18
SLIRP-212ENST00000613856 S100A12P80511 92 aa7.67□□□□□ -1.18
SLIRP-212ENST00000613856 COX6A2Q02221 97 aa7.67□□□□□ -1.18
SLIRP-212ENST00000613856 TTC32Q5I0X7 151 aa7.67□□□□□ -1.18
SLIRP-212ENST00000613856 TMEM170BQ5T4T1 132 aa7.67□□□□□ -1.18
SLIRP-212ENST00000613856 LINC00469Q8N7U9 141 aa7.67□□□□□ -1.18
SLIRP-212ENST00000613856 CHCHD10Q8WYQ3 142 aaPredicted RBP7.67□□□□□ -1.18
SLIRP-212ENST00000613856 C12orf57Q99622 126 aa7.67□□□□□ -1.18
SLIRP-212ENST00000613856 TRAV8-3A0A0A6YYJ7 113 aa7.66□□□□□ -1.18
SLIRP-212ENST00000613856 hDV102S1A0JD36 115 aa7.66□□□□□ -1.18
SLIRP-212ENST00000613856 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
SLIRP-212ENST00000613856 H3BRM9 83 aa7.66□□□□□ -1.18
SLIRP-212ENST00000613856 HERVK_113P61574 105 aa7.66□□□□□ -1.18
SLIRP-212ENST00000613856 CD164L2Q6UWJ8 174 aa7.66□□□□□ -1.18
SLIRP-212ENST00000613856 LINC01561Q8N1V8 128 aa7.66□□□□□ -1.18
SLIRP-212ENST00000613856 CDKN2A-AS1Q9UH64 79 aa7.66□□□□□ -1.18
SLIRP-212ENST00000613856 A0A087WZ39 114 aa7.65□□□□□ -1.18
SLIRP-212ENST00000613856 XCL1P47992 114 aa7.65□□□□□ -1.18
SLIRP-212ENST00000613856 MAJINQ3KP22 176 aa7.65□□□□□ -1.18
SLIRP-212ENST00000613856 STPG4Q8N801 248 aa7.65□□□□□ -1.18
SLIRP-212ENST00000613856 IGLV10-54A0A075B6I4 117 aa7.64□□□□□ -1.19
SLIRP-212ENST00000613856 E9PLD3 99 aa7.64□□□□□ -1.19
SLIRP-212ENST00000613856 FOXI1Q12951 378 aa7.64□□□□□ -1.19
SLIRP-212ENST00000613856 SPATA45Q537H7 98 aa7.64□□□□□ -1.19
SLIRP-212ENST00000613856 ANKRD39Q53RE8 183 aa7.64□□□□□ -1.19
SLIRP-212ENST00000613856 KRTAP26-1Q6PEX3 210 aa7.64□□□□□ -1.19
SLIRP-212ENST00000613856 RMI2Q96E14 147 aa7.64□□□□□ -1.19
SLIRP-212ENST00000613856 C1orf43Q9BWL3 253 aa7.64□□□□□ -1.19
SLIRP-212ENST00000613856 KRTAP1-5Q9BYS1 174 aa7.64□□□□□ -1.19
SLIRP-212ENST00000613856 PAM16Q9Y3D7 125 aa7.64□□□□□ -1.19
SLIRP-212ENST00000613856 IGLV5-39A0A0G2JS06 123 aa7.63□□□□□ -1.19
SLIRP-212ENST00000613856 NBDYA0A0U1RRE5 68 aa7.63□□□□□ -1.19
SLIRP-212ENST00000613856 SMIM1B2RUZ4 78 aa7.63□□□□□ -1.19
SLIRP-212ENST00000613856 IGHV1-58A0A0C4DH39 117 aa7.62□□□□□ -1.19
SLIRP-212ENST00000613856 GAGE12HA6NDE8 117 aa7.62□□□□□ -1.19
SLIRP-212ENST00000613856 COX7A2LO14548 114 aa7.62□□□□□ -1.19
SLIRP-212ENST00000613856 SPINK8P0C7L1 97 aa7.62□□□□□ -1.19
SLIRP-212ENST00000613856 LRP1BQ9NZR2 4599 aa7.62□□□□□ -1.19
SLIRP-212ENST00000613856 IGKV2D-24A0A075B6R9 120 aa7.61□□□□□ -1.19
SLIRP-212ENST00000613856 IGKV2D-26A0A0A0MRZ7 120 aa7.61□□□□□ -1.19
SLIRP-212ENST00000613856 LEPROTO15243 131 aa7.61□□□□□ -1.19
SLIRP-212ENST00000613856 C5orf38Q86SI9 138 aa7.61□□□□□ -1.19
SLIRP-212ENST00000613856 MAPKAPK5-AS1Q8N8E1 139 aa7.61□□□□□ -1.19
SLIRP-212ENST00000613856 PLEKHB2Q96CS7 222 aa7.61□□□□□ -1.19
SLIRP-212ENST00000613856 Q9HAA7 133 aa7.61□□□□□ -1.19
SLIRP-212ENST00000613856 COX11Q9Y6N1 276 aa7.61□□□□□ -1.19
SLIRP-212ENST00000613856 APOBP04114 4563 aaKnown RBP7.59□□□□□ -1.19
SLIRP-212ENST00000613856 IGHV3-64A0A075B6Q5 118 aa7.59□□□□□ -1.19
SLIRP-212ENST00000613856 J3QQQ9 107 aa7.59□□□□□ -1.19
SLIRP-212ENST00000613856 APOMO95445 188 aa7.59□□□□□ -1.19
SLIRP-212ENST00000613856 COX8AP10176 69 aa7.59□□□□□ -1.19
SLIRP-212ENST00000613856 NMUP48645 174 aa7.59□□□□□ -1.19
SLIRP-212ENST00000613856 TSPEAR-AS2P59090 65 aa7.59□□□□□ -1.19
SLIRP-212ENST00000613856 Q6ZR54 194 aa7.59□□□□□ -1.19
SLIRP-212ENST00000613856 TM2D2Q9BX73 214 aa7.59□□□□□ -1.19
SLIRP-212ENST00000613856 DLEU1O43261 78 aa7.58□□□□□ -1.2
SLIRP-212ENST00000613856 MALP21145 153 aa7.58□□□□□ -1.2
SLIRP-212ENST00000613856 Q8IZM0 81 aa7.58□□□□□ -1.2
SLIRP-212ENST00000613856 LGALS3P17931 250 aaKnown RBP7.57□□□□□ -1.2
SLIRP-212ENST00000613856 PCP2Q8IVA1 136 aa7.57□□□□□ -1.2
SLIRP-212ENST00000613856 BOD1L2Q8IYS8 172 aa7.57□□□□□ -1.2
SLIRP-212ENST00000613856 COX7B2Q8TF08 81 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms