RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 CXCL5P42830 114 aa9.12□□□□□ -0.95
PCDHGA4-202ENST00000612927 SDIM1Q6ZPB5 146 aa9.12□□□□□ -0.95
PCDHGA4-202ENST00000612927 VSIG2Q96IQ7 327 aa9.12□□□□□ -0.95
PCDHGA4-202ENST00000612927 A0A1B0GX51 115 aa9.11□□□□□ -0.95
PCDHGA4-202ENST00000612927 ODF3L2Q3SX64 289 aa9.11□□□□□ -0.95
PCDHGA4-202ENST00000612927 NOTCH3Q9UM47 2321 aa9.11□□□□□ -0.95
PCDHGA4-202ENST00000612927 Q6ZSN1 163 aa9.11□□□□□ -0.95
PCDHGA4-202ENST00000612927 NACAE9PAV3 2078 aa9.11□□□□□ -0.95
PCDHGA4-202ENST00000612927 TINCRA0A1B0GVN0 87 aa9.1□□□□□ -0.95
PCDHGA4-202ENST00000612927 HILS1P60008 231 aa9.1□□□□□ -0.95
PCDHGA4-202ENST00000612927 FASNP49327 2511 aaKnown RBP9.1□□□□□ -0.95
PCDHGA4-202ENST00000612927 CEMP1Q6PRD7 247 aaPredicted RBP9.1□□□□□ -0.95
PCDHGA4-202ENST00000612927 EDA2RQ9HAV5 297 aa9.1□□□□□ -0.95
PCDHGA4-202ENST00000612927 SETXQ7Z333 2677 aaKnown RBP9.1□□□□□ -0.95
PCDHGA4-202ENST00000612927 ZNF415Q09FC8 603 aa9.09□□□□□ -0.95
PCDHGA4-202ENST00000612927 SMCR5Q8TEV8 140 aa9.09□□□□□ -0.95
PCDHGA4-202ENST00000612927 XCL2Q9UBD3 114 aa9.09□□□□□ -0.95
PCDHGA4-202ENST00000612927 HERVK_113P63121 156 aa9.09□□□□□ -0.95
PCDHGA4-202ENST00000612927 FAM104AQ969W3 186 aa9.09□□□□□ -0.95
PCDHGA4-202ENST00000612927 COX7A2LO14548 114 aa9.08□□□□□ -0.96
PCDHGA4-202ENST00000612927 C11orf72Q8NBR9 251 aa9.08□□□□□ -0.96
PCDHGA4-202ENST00000612927 IGHV3OR16-12A0A075B7B8 117 aa9.08□□□□□ -0.96
PCDHGA4-202ENST00000612927 INSP01308 110 aa9.08□□□□□ -0.96
PCDHGA4-202ENST00000612927 RNASE13Q5GAN3 156 aaKnown RBP9.08□□□□□ -0.96
PCDHGA4-202ENST00000612927 C5orf38Q86SI9 138 aa9.08□□□□□ -0.96
PCDHGA4-202ENST00000612927 GCN1Q92616 2671 aaKnown RBP9.08□□□□□ -0.96
PCDHGA4-202ENST00000612927 NPC2P61916 151 aa9.08□□□□□ -0.96
PCDHGA4-202ENST00000612927 RPS28P62857 69 aaKnown RBP9.08□□□□□ -0.96
PCDHGA4-202ENST00000612927 COX7CP15954 63 aa9.07□□□□□ -0.96
PCDHGA4-202ENST00000612927 DAND5Q8N907 189 aa9.07□□□□□ -0.96
PCDHGA4-202ENST00000612927 IGHV3-38A0A0C4DH36 116 aa9.06□□□□□ -0.96
PCDHGA4-202ENST00000612927 NDUFA1O15239 70 aa9.06□□□□□ -0.96
PCDHGA4-202ENST00000612927 LY6G6DO95868 133 aa9.06□□□□□ -0.96
PCDHGA4-202ENST00000612927 TRACP01848 142 aa9.06□□□□□ -0.96
PCDHGA4-202ENST00000612927 CRYGAP11844 174 aa9.06□□□□□ -0.96
PCDHGA4-202ENST00000612927 CIRBPQ14011 172 aaKnown RBP9.06□□□□□ -0.96
PCDHGA4-202ENST00000612927 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
PCDHGA4-202ENST00000612927 HECTD1Q9ULT8 2610 aa9.05□□□□□ -0.96
PCDHGA4-202ENST00000612927 FAM222AQ5U5X8 452 aa9.05□□□□□ -0.96
PCDHGA4-202ENST00000612927 STHQ8IWL8 128 aa9.05□□□□□ -0.96
PCDHGA4-202ENST00000612927 LINC00467Q9BRT7 94 aa9.05□□□□□ -0.96
PCDHGA4-202ENST00000612927 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.04□□□□□ -0.96
PCDHGA4-202ENST00000612927 IGKV2-29A2NJV5 120 aaPredicted RBP9.04□□□□□ -0.96
PCDHGA4-202ENST00000612927 INAFM2P0DMQ5 153 aa9.04□□□□□ -0.96
PCDHGA4-202ENST00000612927 HIST1H4AP62805 103 aaKnown RBP9.04□□□□□ -0.96
PCDHGA4-202ENST00000612927 DAZ2Q13117 558 aaKnown RBP9.04□□□□□ -0.96
PCDHGA4-202ENST00000612927 DAZ4Q86SG3 579 aaKnown RBP9.04□□□□□ -0.96
PCDHGA4-202ENST00000612927 DAZ3Q9NR90 486 aaKnown RBP9.04□□□□□ -0.96
PCDHGA4-202ENST00000612927 ATOX1O00244 68 aa9.04□□□□□ -0.96
PCDHGA4-202ENST00000612927 C1orf158Q8N1D5 194 aa9.04□□□□□ -0.96
PCDHGA4-202ENST00000612927 KRTAP10-3P60369 221 aa9.03□□□□□ -0.96
PCDHGA4-202ENST00000612927 BEAN1Q3B7T3 259 aa9.03□□□□□ -0.96
PCDHGA4-202ENST00000612927 A8MZ25 164 aa9.03□□□□□ -0.96
PCDHGA4-202ENST00000612927 LINC00308Q8TCZ7 52 aa9.03□□□□□ -0.96
PCDHGA4-202ENST00000612927 C2orf48Q96LS8 159 aa9.03□□□□□ -0.96
PCDHGA4-202ENST00000612927 CHCHD7Q9BUK0 85 aa9.03□□□□□ -0.96
PCDHGA4-202ENST00000612927 WFDC10AQ9H1F0 79 aa9.03□□□□□ -0.96
PCDHGA4-202ENST00000612927 KLK5Q9Y337 293 aaPredicted RBP9.03□□□□□ -0.96
PCDHGA4-202ENST00000612927 GAGE2AQ6NT46 116 aa9.02□□□□□ -0.97
PCDHGA4-202ENST00000612927 C2CD3Q4AC94 2353 aa9.02□□□□□ -0.97
PCDHGA4-202ENST00000612927 HIVEP2P31629 2446 aa9.02□□□□□ -0.97
PCDHGA4-202ENST00000612927 IGLV5-45A0A087WSX0 123 aa9.02□□□□□ -0.97
PCDHGA4-202ENST00000612927 IGHV3-53P01767 116 aa9.02□□□□□ -0.97
PCDHGA4-202ENST00000612927 SEC61GP60059 68 aa9.02□□□□□ -0.97
PCDHGA4-202ENST00000612927 UBE2D4Q9Y2X8 147 aa9.02□□□□□ -0.97
PCDHGA4-202ENST00000612927 TRGV1A0A0A0MS02 117 aa9.01□□□□□ -0.97
PCDHGA4-202ENST00000612927 IGLV1-51P01701 117 aa9.01□□□□□ -0.97
PCDHGA4-202ENST00000612927 BAALC-AS2P0C853 105 aa9.01□□□□□ -0.97
PCDHGA4-202ENST00000612927 TIRAPP58753 221 aa9.01□□□□□ -0.97
PCDHGA4-202ENST00000612927 PIK3CD-AS1Q5SR53 167 aa9.01□□□□□ -0.97
PCDHGA4-202ENST00000612927 RS1O15537 224 aa9□□□□□ -0.97
PCDHGA4-202ENST00000612927 C4orf26Q17RF5 130 aa9□□□□□ -0.97
PCDHGA4-202ENST00000612927 HRCT1Q6UXD1 115 aa9□□□□□ -0.97
PCDHGA4-202ENST00000612927 C19orf73Q9NVV2 129 aa8.99□□□□□ -0.97
PCDHGA4-202ENST00000612927 INAFM1C9JVW0 142 aa8.99□□□□□ -0.97
PCDHGA4-202ENST00000612927 Q6ZTI0 123 aa8.99□□□□□ -0.97
PCDHGA4-202ENST00000612927 C22orf24Q9Y442 160 aa8.99□□□□□ -0.97
PCDHGA4-202ENST00000612927 GIG44P09565 113 aaPredicted RBP8.98□□□□□ -0.97
PCDHGA4-202ENST00000612927 IL17DQ8TAD2 202 aa8.98□□□□□ -0.97
PCDHGA4-202ENST00000612927 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
PCDHGA4-202ENST00000612927 IGLV5-39A0A0G2JS06 123 aa8.98□□□□□ -0.97
PCDHGA4-202ENST00000612927 OTOGQ6ZRI0 2925 aa8.98□□□□□ -0.97
PCDHGA4-202ENST00000612927 NOTCH2Q04721 2471 aa8.97□□□□□ -0.97
PCDHGA4-202ENST00000612927 RPL35AP18077 110 aaKnown RBP8.97□□□□□ -0.97
PCDHGA4-202ENST00000612927 TMEM258P61165 79 aa8.97□□□□□ -0.97
PCDHGA4-202ENST00000612927 Q9H8V8 135 aa8.97□□□□□ -0.97
PCDHGA4-202ENST00000612927 CMC4P56277 68 aaPredicted RBP8.97□□□□□ -0.97
PCDHGA4-202ENST00000612927 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
PCDHGA4-202ENST00000612927 OVOL2Q9BRP0 275 aa8.96□□□□□ -0.98
PCDHGA4-202ENST00000612927 NOP10Q9NPE3 64 aaKnown RBP8.96□□□□□ -0.98
PCDHGA4-202ENST00000612927 MALP21145 153 aa8.95□□□□□ -0.98
PCDHGA4-202ENST00000612927 hADV29S1A0JD25 119 aa8.95□□□□□ -0.98
PCDHGA4-202ENST00000612927 PF4P02776 101 aa8.95□□□□□ -0.98
PCDHGA4-202ENST00000612927 SOSTDC1Q6X4U4 206 aa8.95□□□□□ -0.98
PCDHGA4-202ENST00000612927 LINC00482Q8N8I6 264 aa8.95□□□□□ -0.98
PCDHGA4-202ENST00000612927 FAM218AQ96MZ4 157 aa8.94□□□□□ -0.98
PCDHGA4-202ENST00000612927 Q6JHZ5 121 aa8.94□□□□□ -0.98
PCDHGA4-202ENST00000612927 PRIMA1Q86XR5 153 aa8.94□□□□□ -0.98
PCDHGA4-202ENST00000612927 PRO0628Q9UI54 55 aa8.94□□□□□ -0.98
PCDHGA4-202ENST00000612927 K7EQD1 137 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms