RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ACYP1P07311 99 aa6.25□□□□□ -1.41
LIG4-204ENST00000611712 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
LIG4-204ENST00000611712 C11orf72Q8NBR9 251 aa6.25□□□□□ -1.41
LIG4-204ENST00000611712 PRO0255Q9UI72 69 aa6.25□□□□□ -1.41
LIG4-204ENST00000611712 LST1O00453 97 aa6.25□□□□□ -1.41
LIG4-204ENST00000611712 H7C423 109 aa6.25□□□□□ -1.41
LIG4-204ENST00000611712 RNF183Q96D59 192 aa6.25□□□□□ -1.41
LIG4-204ENST00000611712 SMIM1B2RUZ4 78 aa6.24□□□□□ -1.41
LIG4-204ENST00000611712 LECT2O14960 151 aa6.24□□□□□ -1.41
LIG4-204ENST00000611712 ZZEF1O43149 2961 aa6.24□□□□□ -1.41
LIG4-204ENST00000611712 C9orf66Q5T8R8 295 aa6.24□□□□□ -1.41
LIG4-204ENST00000611712 ATP5G1P05496 136 aa6.23□□□□□ -1.41
LIG4-204ENST00000611712 FAM222AQ5U5X8 452 aa6.23□□□□□ -1.41
LIG4-204ENST00000611712 Q8N2B8 174 aa6.23□□□□□ -1.41
LIG4-204ENST00000611712 ORMDL1Q9P0S3 153 aa6.22□□□□□ -1.41
LIG4-204ENST00000611712 FASNP49327 2511 aaKnown RBP6.22□□□□□ -1.41
LIG4-204ENST00000611712 EDA2RQ9HAV5 297 aa6.22□□□□□ -1.41
LIG4-204ENST00000611712 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
LIG4-204ENST00000611712 SS18L2Q9UHA2 77 aa6.22□□□□□ -1.41
LIG4-204ENST00000611712 ZNF561-AS1K7EIQ3 104 aa6.21□□□□□ -1.41
LIG4-204ENST00000611712 MRPL23Q16540 153 aaKnown RBP6.21□□□□□ -1.41
LIG4-204ENST00000611712 C9orf153Q5TBE3 101 aa6.21□□□□□ -1.41
LIG4-204ENST00000611712 LINC00269Q8N2A0 174 aa6.21□□□□□ -1.41
LIG4-204ENST00000611712 ASPMQ8IZT6 3477 aa6.21□□□□□ -1.42
LIG4-204ENST00000611712 FAM236AA0A1B0GUQ0 79 aa6.21□□□□□ -1.42
LIG4-204ENST00000611712 FAM236BA0A1B0GV22 79 aa6.21□□□□□ -1.42
LIG4-204ENST00000611712 IBA57-AS1B1ANH7 110 aa6.21□□□□□ -1.42
LIG4-204ENST00000611712 TRACP01848 142 aa6.21□□□□□ -1.42
LIG4-204ENST00000611712 SPART-AS1P0CW21 52 aa6.21□□□□□ -1.42
LIG4-204ENST00000611712 NDUFV3P56181 108 aaKnown RBP6.21□□□□□ -1.42
LIG4-204ENST00000611712 CDIP1Q9H305 208 aa6.21□□□□□ -1.42
LIG4-204ENST00000611712 CSDC2Q9Y534 153 aaKnown RBP6.21□□□□□ -1.42
LIG4-204ENST00000611712 GHRHP01286 108 aa6.21□□□□□ -1.42
LIG4-204ENST00000611712 PLA2G2AP14555 144 aa6.21□□□□□ -1.42
LIG4-204ENST00000611712 IGLV1-51P01701 117 aa6.2□□□□□ -1.42
LIG4-204ENST00000611712 FSHBP01225 129 aa6.2□□□□□ -1.42
LIG4-204ENST00000611712 IGLV4-60A0A075B6I1 120 aa6.2□□□□□ -1.42
LIG4-204ENST00000611712 NTM-AS1Q6ZSK4 140 aa6.19□□□□□ -1.42
LIG4-204ENST00000611712 C14orf132Q9NPU4 83 aa6.19□□□□□ -1.42
LIG4-204ENST00000611712 KLK12Q9UKR0 248 aa6.19□□□□□ -1.42
LIG4-204ENST00000611712 COL12A1Q99715 3063 aa6.19□□□□□ -1.42
LIG4-204ENST00000611712 LINC00959A0A1B0GUT2 108 aa6.19□□□□□ -1.42
LIG4-204ENST00000611712 IGKV3D-7A0A0C4DH55 119 aa6.19□□□□□ -1.42
LIG4-204ENST00000611712 HILS1P60008 231 aa6.19□□□□□ -1.42
LIG4-204ENST00000611712 NCR3O14931 201 aa6.18□□□□□ -1.42
LIG4-204ENST00000611712 LINC00643Q86TS7 51 aa6.18□□□□□ -1.42
LIG4-204ENST00000611712 CLUHP3Q96NS8 147 aa6.18□□□□□ -1.42
LIG4-204ENST00000611712 SMIM9A6NGZ8 99 aa6.18□□□□□ -1.42
LIG4-204ENST00000611712 SPAG11BQ08648 103 aa6.18□□□□□ -1.42
LIG4-204ENST00000611712 A0A096LNT2 108 aa6.18□□□□□ -1.42
LIG4-204ENST00000611712 SLPIP03973 132 aa6.18□□□□□ -1.42
LIG4-204ENST00000611712 FLNAP21333 2647 aaKnown RBP6.18□□□□□ -1.42
LIG4-204ENST00000611712 REG3AQ06141 175 aa6.18□□□□□ -1.42
LIG4-204ENST00000611712 CHCHD10Q8WYQ3 142 aaPredicted RBP6.18□□□□□ -1.42
LIG4-204ENST00000611712 UBL5Q9BZL1 73 aa6.18□□□□□ -1.42
LIG4-204ENST00000611712 TMEM126AQ9H061 195 aa6.18□□□□□ -1.42
LIG4-204ENST00000611712 CXCL5P42830 114 aa6.17□□□□□ -1.42
LIG4-204ENST00000611712 CCL18P55774 89 aa6.17□□□□□ -1.42
LIG4-204ENST00000611712 SMR3AQ99954 134 aa6.17□□□□□ -1.42
LIG4-204ENST00000611712 FHL2Q14192 279 aa6.17□□□□□ -1.42
LIG4-204ENST00000611712 IGLV5-39A0A0G2JS06 123 aa6.17□□□□□ -1.42
LIG4-204ENST00000611712 LYRM9A8MSI8 78 aa6.17□□□□□ -1.42
LIG4-204ENST00000611712 C3orf56Q8N813 242 aa6.17□□□□□ -1.42
LIG4-204ENST00000611712 SMIM11BQ8TCY0 68 aa6.17□□□□□ -1.42
LIG4-204ENST00000611712 FLNCQ14315 2725 aa6.17□□□□□ -1.42
LIG4-204ENST00000611712 HAMPP81172 84 aa6.16□□□□□ -1.42
LIG4-204ENST00000611712 IGLV5-45A0A087WSX0 123 aa6.15□□□□□ -1.42
LIG4-204ENST00000611712 INAFM1C9JVW0 142 aa6.15□□□□□ -1.42
LIG4-204ENST00000611712 FHL3Q13643 280 aa6.15□□□□□ -1.42
LIG4-204ENST00000611712 SBSPONQ8IVN8 264 aa6.15□□□□□ -1.42
LIG4-204ENST00000611712 LITAFQ99732 161 aa6.15□□□□□ -1.42
LIG4-204ENST00000611712 A0A087WZ39 114 aa6.15□□□□□ -1.43
LIG4-204ENST00000611712 A8MTW9 85 aa6.15□□□□□ -1.43
LIG4-204ENST00000611712 M0QXV9 152 aa6.15□□□□□ -1.43
LIG4-204ENST00000611712 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.15□□□□□ -1.43
LIG4-204ENST00000611712 CAMK2N2Q96S95 79 aa6.15□□□□□ -1.43
LIG4-204ENST00000611712 ZFHX4Q86UP3 3567 aa6.15□□□□□ -1.43
LIG4-204ENST00000611712 DSCR8Q96T75 97 aa6.14□□□□□ -1.43
LIG4-204ENST00000611712 DCHS1Q96JQ0 3298 aa6.14□□□□□ -1.43
LIG4-204ENST00000611712 LAMA5O15230 3695 aa6.14□□□□□ -1.43
LIG4-204ENST00000611712 ITPR3Q14573 2671 aa6.14□□□□□ -1.43
LIG4-204ENST00000611712 C16orf95Q9H693 158 aa6.14□□□□□ -1.43
LIG4-204ENST00000611712 IGSF10Q6WRI0 2623 aa6.14□□□□□ -1.43
LIG4-204ENST00000611712 IGHV4-28A0A0C4DH34 117 aa6.14□□□□□ -1.43
LIG4-204ENST00000611712 JMJD7-PLA2G4BH0Y9G9 81 aa6.14□□□□□ -1.43
LIG4-204ENST00000611712 LY6G6DO95868 133 aa6.14□□□□□ -1.43
LIG4-204ENST00000611712 RPL18AQ02543 176 aaKnown RBP6.14□□□□□ -1.43
LIG4-204ENST00000611712 CD164L2Q6UWJ8 174 aa6.14□□□□□ -1.43
LIG4-204ENST00000611712 LINC00526Q96FQ7 95 aa6.14□□□□□ -1.43
LIG4-204ENST00000611712 FAM240AA0A1B0GVK7 77 aa6.13□□□□□ -1.43
LIG4-204ENST00000611712 SOSTDC1Q6X4U4 206 aa6.13□□□□□ -1.43
LIG4-204ENST00000611712 FAM110AQ9BQ89 295 aa6.13□□□□□ -1.43
LIG4-204ENST00000611712 IGKV2D-24A0A075B6R9 120 aa6.13□□□□□ -1.43
LIG4-204ENST00000611712 RPL28P46779 137 aaKnown RBP6.13□□□□□ -1.43
LIG4-204ENST00000611712 KIR2DL5BQ8NHK3 375 aa6.13□□□□□ -1.43
LIG4-204ENST00000611712 CFAP46Q8IYW2 2715 aa6.13□□□□□ -1.43
LIG4-204ENST00000611712 TMEM256-PLSCR3K7ERE1 68 aa6.13□□□□□ -1.43
LIG4-204ENST00000611712 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
LIG4-204ENST00000611712 SDIM1Q6ZPB5 146 aa6.12□□□□□ -1.43
LIG4-204ENST00000611712 C1orf43Q9BWL3 253 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms