RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 PAX4O43316 350 aa15.43■□□□□ 0.06
UBE3C-209ENST00000611269 IGHV3-30-3P0DP02 117 aa15.43■□□□□ 0.06
UBE3C-209ENST00000611269 AMMECR1LQ6DCA0 310 aa15.43■□□□□ 0.06
UBE3C-209ENST00000611269 TMEM101Q96IK0 257 aa15.42■□□□□ 0.06
UBE3C-209ENST00000611269 IGHV3-64A0A075B6Q5 118 aa15.41■□□□□ 0.06
UBE3C-209ENST00000611269 GYPEP15421 78 aa15.41■□□□□ 0.06
UBE3C-209ENST00000611269 HERVK_113P63121 156 aa15.41■□□□□ 0.06
UBE3C-209ENST00000611269 SRSF9Q13242 221 aaKnown RBP eCLIP15.41■□□□□ 0.066e-7■■□□□ 13
UBE3C-209ENST00000611269 NHP2Q9NX24 153 aaKnown RBP15.41■□□□□ 0.06
UBE3C-209ENST00000611269 LINC00242Q5T6M2 205 aa15.4■□□□□ 0.06
UBE3C-209ENST00000611269 RAB37Q96AX2 223 aa15.4■□□□□ 0.06
UBE3C-209ENST00000611269 CDKN2A-AS1Q9UH64 79 aa15.4■□□□□ 0.06
UBE3C-209ENST00000611269 TRAV8-3A0A0A6YYJ7 113 aa15.39■□□□□ 0.05
UBE3C-209ENST00000611269 A0A1B0GWB2 263 aa15.39■□□□□ 0.05
UBE3C-209ENST00000611269 CCL25O15444 150 aa15.39■□□□□ 0.05
UBE3C-209ENST00000611269 ATP6V0E2Q8NHE4 81 aa15.39■□□□□ 0.05
UBE3C-209ENST00000611269 DNAH7Q8WXX0 4024 aa15.38■□□□□ 0.05
UBE3C-209ENST00000611269 H3BUT2 72 aa15.37■□□□□ 0.05
UBE3C-209ENST00000611269 COX6A2Q02221 97 aa15.37■□□□□ 0.05
UBE3C-209ENST00000611269 SPINK8P0C7L1 97 aa15.36■□□□□ 0.05
UBE3C-209ENST00000611269 TMEM238LA0A1B0GVL6 79 aa15.35■□□□□ 0.05
UBE3C-209ENST00000611269 A6NJY4 79 aa15.35■□□□□ 0.05
UBE3C-209ENST00000611269 K7ERJ3 54 aa15.35■□□□□ 0.05
UBE3C-209ENST00000611269 IGHV3-30P01768 117 aa15.35■□□□□ 0.05
UBE3C-209ENST00000611269 IGHV3-30-5P0DP03 117 aa15.35■□□□□ 0.05
UBE3C-209ENST00000611269 GAGE6Q13070 117 aa15.35■□□□□ 0.05
UBE3C-209ENST00000611269 C10orf126Q8N4M7 172 aa15.35■□□□□ 0.05
UBE3C-209ENST00000611269 TRAV13-1A0A0B4J241 112 aa15.34■□□□□ 0.05
UBE3C-209ENST00000611269 H3BNG1 76 aa15.34■□□□□ 0.05
UBE3C-209ENST00000611269 CHCHD5Q9BSY4 110 aa15.34■□□□□ 0.05
UBE3C-209ENST00000611269 A0A096LPF7 62 aa15.33■□□□□ 0.05
UBE3C-209ENST00000611269 A0A0J9YXY3 114 aa15.33■□□□□ 0.05
UBE3C-209ENST00000611269 CSMD3Q7Z407 3707 aa15.33■□□□□ 0.04
UBE3C-209ENST00000611269 IGLV5-39A0A0G2JS06 123 aa15.33■□□□□ 0.04
UBE3C-209ENST00000611269 A0A1W2PPM0 123 aa15.33■□□□□ 0.04
UBE3C-209ENST00000611269 ZFAND6Q6FIF0 208 aa15.33■□□□□ 0.04
UBE3C-209ENST00000611269 ICOSQ9Y6W8 199 aa15.33■□□□□ 0.04
UBE3C-209ENST00000611269 MRPL23Q16540 153 aaKnown RBP15.32■□□□□ 0.04
UBE3C-209ENST00000611269 NDUFA12Q9UI09 145 aa15.32■□□□□ 0.04
UBE3C-209ENST00000611269 IGLL5B9A064 214 aa15.31■□□□□ 0.04
UBE3C-209ENST00000611269 NAA38Q9BRA0 125 aaKnown RBP15.31■□□□□ 0.04
UBE3C-209ENST00000611269 TMEM238C9JI98 176 aa15.3■□□□□ 0.04
UBE3C-209ENST00000611269 IGLV4-60A0A075B6I1 120 aa15.29■□□□□ 0.04
UBE3C-209ENST00000611269 GAGE10A6NGK3 116 aa15.29■□□□□ 0.04
UBE3C-209ENST00000611269 A0A1B0GUV1 79 aa15.28■□□□□ 0.04
UBE3C-209ENST00000611269 GTF2H5Q6ZYL4 71 aa15.28■□□□□ 0.04
UBE3C-209ENST00000611269 NUPR2A6NF83 97 aa15.27■□□□□ 0.04
UBE3C-209ENST00000611269 SMIM1B2RUZ4 78 aa15.27■□□□□ 0.04
UBE3C-209ENST00000611269 FABP2P12104 132 aa15.27■□□□□ 0.04
UBE3C-209ENST00000611269 LITAFQ99732 161 aa15.27■□□□□ 0.04
UBE3C-209ENST00000611269 K7EP34 96 aa15.27■□□□□ 0.03
UBE3C-209ENST00000611269 NDUFA1O15239 70 aa15.27■□□□□ 0.03
UBE3C-209ENST00000611269 C15orf53Q8NAA6 179 aa15.27■□□□□ 0.03
UBE3C-209ENST00000611269 WWC2-AS2Q96NR7 200 aa15.27■□□□□ 0.03
UBE3C-209ENST00000611269 SH2D6Q7Z4S9 175 aa15.26■□□□□ 0.03
UBE3C-209ENST00000611269 DYNC2H1Q8NCM8 4307 aaKnown RBP15.26■□□□□ 0.03
UBE3C-209ENST00000611269 TIMM17BO60830 172 aa15.25■□□□□ 0.03
UBE3C-209ENST00000611269 MUC7Q8TAX7 377 aa15.24■□□□□ 0.03
UBE3C-209ENST00000611269 SPANXDQ9BXN6 97 aa15.24■□□□□ 0.03
UBE3C-209ENST00000611269 SPANXCQ9NY87 97 aa15.24■□□□□ 0.03
UBE3C-209ENST00000611269 MUSTN1Q8IVN3 82 aa15.23■□□□□ 0.03
UBE3C-209ENST00000611269 SPCS1Q9Y6A9 102 aa15.23■□□□□ 0.03
UBE3C-209ENST00000611269 RPL24P83731 157 aaKnown RBP15.23■□□□□ 0.03
UBE3C-209ENST00000611269 KLK5Q9Y337 293 aaPredicted RBP15.23■□□□□ 0.03
UBE3C-209ENST00000611269 STARD9Q9P2P6 4700 aa15.22■□□□□ 0.03
UBE3C-209ENST00000611269 CFC1BP0CG36 223 aa15.22■□□□□ 0.03
UBE3C-209ENST00000611269 CFC1P0CG37 223 aa15.22■□□□□ 0.03
UBE3C-209ENST00000611269 RBX1P62877 108 aa15.22■□□□□ 0.03
UBE3C-209ENST00000611269 TMEM262E9PQX1 116 aa15.21■□□□□ 0.03
UBE3C-209ENST00000611269 LYPD5Q6UWN5 251 aa15.21■□□□□ 0.03
UBE3C-209ENST00000611269 ADAMTSL4-AS1Q5T5F5 129 aa15.2■□□□□ 0.02
UBE3C-209ENST00000611269 IGHV3OR16-9A0A0B4J2B5 98 aa15.2■□□□□ 0.02
UBE3C-209ENST00000611269 A4D1N5 150 aa15.2■□□□□ 0.02
UBE3C-209ENST00000611269 APOMO95445 188 aa15.2■□□□□ 0.02
UBE3C-209ENST00000611269 LINC00959A0A1B0GUT2 108 aa15.19■□□□□ 0.02
UBE3C-209ENST00000611269 APLNQ9ULZ1 77 aa15.19■□□□□ 0.02
UBE3C-209ENST00000611269 IGKV3OR2-268A0A0C4DH90 116 aa15.18■□□□□ 0.02
UBE3C-209ENST00000611269 MIAQ16674 131 aa15.18■□□□□ 0.02
UBE3C-209ENST00000611269 ESRGQ1W209 222 aa15.18■□□□□ 0.02
UBE3C-209ENST00000611269 Q9H8V8 135 aa15.18■□□□□ 0.02
UBE3C-209ENST00000611269 PGPEP1Q9NXJ5 209 aa15.18■□□□□ 0.02
UBE3C-209ENST00000611269 ZNF625Q96I27 306 aaPredicted RBP15.18■□□□□ 0.02
UBE3C-209ENST00000611269 TENM2Q9NT68 2774 aa15.17■□□□□ 0.02
UBE3C-209ENST00000611269 CIRBPQ14011 172 aaKnown RBP15.17■□□□□ 0.02
UBE3C-209ENST00000611269 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.16■□□□□ 0.02
UBE3C-209ENST00000611269 PRO1854Q9UHT4 67 aa15.16■□□□□ 0.02
UBE3C-209ENST00000611269 A0A087WZ39 114 aa15.16■□□□□ 0.02
UBE3C-209ENST00000611269 PRSS2P07478 247 aa15.16■□□□□ 0.02
UBE3C-209ENST00000611269 HERV-K104P63124 156 aa15.16■□□□□ 0.02
UBE3C-209ENST00000611269 A0A0B4J2C4 111 aa15.15■□□□□ 0.02
UBE3C-209ENST00000611269 TSPAN13O95857 204 aa15.15■□□□□ 0.02
UBE3C-209ENST00000611269 IFITM1P13164 125 aa15.15■□□□□ 0.02
UBE3C-209ENST00000611269 LELP1Q5T871 98 aa15.15■□□□□ 0.02
UBE3C-209ENST00000611269 SS18Q15532 418 aa15.14■□□□□ 0.01
UBE3C-209ENST00000611269 PLECQ15149 4684 aaKnown RBP15.14■□□□□ 0.01
UBE3C-209ENST00000611269 LYSTQ99698 3801 aa15.13■□□□□ 0.01
UBE3C-209ENST00000611269 EIF4EBP3O60516 100 aaPredicted RBP15.12■□□□□ 0.01
UBE3C-209ENST00000611269 COX7B2Q8TF08 81 aa15.12■□□□□ 0.01
UBE3C-209ENST00000611269 CCL18P55774 89 aa15.12■□□□□ 0.01
UBE3C-209ENST00000611269 LINC00588Q9Y4M8 146 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms