RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 COMMD6Q7Z4G1 85 aa-0.88□□□□□ -2.55
RNU6-88P-201ENST00000606801 C5orf38Q86SI9 138 aa-0.88□□□□□ -2.55
RNU6-88P-201ENST00000606801 NALCNQ8IZF0 1738 aa-0.89□□□□□ -2.55
RNU6-88P-201ENST00000606801 SFT2D2O95562 160 aa-0.89□□□□□ -2.55
RNU6-88P-201ENST00000606801 TNFP01375 233 aa-0.89□□□□□ -2.55
RNU6-88P-201ENST00000606801 FGF7P21781 194 aa-0.89□□□□□ -2.55
RNU6-88P-201ENST00000606801 A2ML1A8K2U0 1454 aa-0.89□□□□□ -2.55
RNU6-88P-201ENST00000606801 OOSP1A8MZH6 123 aa-0.9□□□□□ -2.55
RNU6-88P-201ENST00000606801 S100A12P80511 92 aa-0.9□□□□□ -2.55
RNU6-88P-201ENST00000606801 KRTAP19-7Q3SYF9 63 aa-0.9□□□□□ -2.55
RNU6-88P-201ENST00000606801 FAM107BQ9H098 131 aa-0.9□□□□□ -2.55
RNU6-88P-201ENST00000606801 SMG6Q86US8 1419 aaKnown RBP-0.9□□□□□ -2.55
RNU6-88P-201ENST00000606801 GAPVD1Q14C86 1478 aa-0.91□□□□□ -2.55
RNU6-88P-201ENST00000606801 SHANK2Q9UPX8 1470 aa-0.91□□□□□ -2.55
RNU6-88P-201ENST00000606801 SSSCA1O60232 199 aa-0.91□□□□□ -2.56
RNU6-88P-201ENST00000606801 APOC2P02655 101 aa-0.91□□□□□ -2.56
RNU6-88P-201ENST00000606801 C8orf59Q8N0T1 100 aaPredicted RBP-0.91□□□□□ -2.56
RNU6-88P-201ENST00000606801 NAIPQ13075 1403 aa-0.91□□□□□ -2.56
RNU6-88P-201ENST00000606801 PDZD2O15018 2839 aa-0.92□□□□□ -2.56
RNU6-88P-201ENST00000606801 HMGXB3Q12766 1538 aa-0.92□□□□□ -2.56
RNU6-88P-201ENST00000606801 LOC285095A0A1B0GVY8 99 aa-0.92□□□□□ -2.56
RNU6-88P-201ENST00000606801 MRPL54Q6P161 138 aaKnown RBP-0.92□□□□□ -2.56
RNU6-88P-201ENST00000606801 MYOZ3Q8TDC0 251 aa-0.92□□□□□ -2.56
RNU6-88P-201ENST00000606801 SPRR4Q96PI1 79 aa-0.92□□□□□ -2.56
RNU6-88P-201ENST00000606801 NBEAL1Q6ZS30 2694 aa-0.92□□□□□ -2.56
RNU6-88P-201ENST00000606801 TSC22D3Q99576 134 aa-0.93□□□□□ -2.56
RNU6-88P-201ENST00000606801 CDC42SE2Q9NRR3 84 aa-0.93□□□□□ -2.56
RNU6-88P-201ENST00000606801 KIAA0556O60303 1618 aa-0.93□□□□□ -2.56
RNU6-88P-201ENST00000606801 NUP188Q5SRE5 1749 aa-0.94□□□□□ -2.56
RNU6-88P-201ENST00000606801 CHKB-CPT1BH3BT56 60 aa-0.94□□□□□ -2.56
RNU6-88P-201ENST00000606801 IGLC1P0CG04 106 aa-0.94□□□□□ -2.56
RNU6-88P-201ENST00000606801 POLA1P09884 1462 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-88P-201ENST00000606801 MAGI1Q96QZ7 1491 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-88P-201ENST00000606801 PKHD1P08F94 4074 aa-0.95□□□□□ -2.56
RNU6-88P-201ENST00000606801 MGPP08493 103 aa-0.95□□□□□ -2.56
RNU6-88P-201ENST00000606801 C10orf113Q5VZT2 155 aa-0.95□□□□□ -2.56
RNU6-88P-201ENST00000606801 TMEM263Q8WUH6 116 aaKnown RBP-0.95□□□□□ -2.56
RNU6-88P-201ENST00000606801 EHBP1L1Q8N3D4 1523 aa-0.95□□□□□ -2.56
RNU6-88P-201ENST00000606801 LINC00959A0A1B0GUT2 108 aa-0.96□□□□□ -2.56
RNU6-88P-201ENST00000606801 IFNGP01579 166 aa-0.96□□□□□ -2.56
RNU6-88P-201ENST00000606801 HMGN1P05114 100 aa-0.96□□□□□ -2.56
RNU6-88P-201ENST00000606801 AKAIN1P0CW23 69 aa-0.96□□□□□ -2.56
RNU6-88P-201ENST00000606801 FAM223AQ8IWN6 122 aa-0.96□□□□□ -2.56
RNU6-88P-201ENST00000606801 PP6455Q8WZ26 134 aa-0.96□□□□□ -2.56
RNU6-88P-201ENST00000606801 NXT2Q9NPJ8 142 aaKnown RBP-0.96□□□□□ -2.56
RNU6-88P-201ENST00000606801 FMN2Q9NZ56 1722 aa-0.97□□□□□ -2.56
RNU6-88P-201ENST00000606801 ROCK2O75116 1388 aaKnown RBP-0.97□□□□□ -2.57
RNU6-88P-201ENST00000606801 KTN1Q86UP2 1357 aaKnown RBP-0.97□□□□□ -2.57
RNU6-88P-201ENST00000606801 LOC730098B7Z3J9 87 aa-0.98□□□□□ -2.57
RNU6-88P-201ENST00000606801 C1orf54Q8WWF1 131 aa-0.98□□□□□ -2.57
RNU6-88P-201ENST00000606801 FLGP20930 4061 aaPredicted RBP-0.98□□□□□ -2.57
RNU6-88P-201ENST00000606801 DIP2CQ9Y2E4 1556 aa-0.99□□□□□ -2.57
RNU6-88P-201ENST00000606801 TRBV7-4A0A0J9YYF1 115 aa-0.99□□□□□ -2.57
RNU6-88P-201ENST00000606801 C9orf153Q5TBE3 101 aa-0.99□□□□□ -2.57
RNU6-88P-201ENST00000606801 PCNX1Q96RV3 2341 aa-0.99□□□□□ -2.57
RNU6-88P-201ENST00000606801 MYOM2P54296 1465 aa-0.99□□□□□ -2.57
RNU6-88P-201ENST00000606801 TOP2BQ02880 1626 aa-1□□□□□ -2.57
RNU6-88P-201ENST00000606801 XRN1Q8IZH2 1706 aaKnown RBP-1□□□□□ -2.57
RNU6-88P-201ENST00000606801 KLK9Q2XQG4 91 aa-1□□□□□ -2.57
RNU6-88P-201ENST00000606801 FXYD6Q9H0Q3 95 aa-1□□□□□ -2.57
RNU6-88P-201ENST00000606801 DPH3P1Q9H4G8 78 aa-1□□□□□ -2.57
RNU6-88P-201ENST00000606801 ARL2-SNX15V9GYD0 113 aa-1□□□□□ -2.57
RNU6-88P-201ENST00000606801 SVEP1Q4LDE5 3571 aa-1.01□□□□□ -2.57
RNU6-88P-201ENST00000606801 UBE2L5PA0A1B0GUS4 154 aa-1.01□□□□□ -2.57
RNU6-88P-201ENST00000606801 UBE2L3P68036 154 aaKnown RBP-1.01□□□□□ -2.57
RNU6-88P-201ENST00000606801 FAM167A-AS1Q96KT0 104 aa-1.01□□□□□ -2.57
RNU6-88P-201ENST00000606801 LINC01600Q96MT4 127 aa-1.01□□□□□ -2.57
RNU6-88P-201ENST00000606801 FAIMQ9NVQ4 179 aa-1.01□□□□□ -2.57
RNU6-88P-201ENST00000606801 UQCR10Q9UDW1 63 aa-1.01□□□□□ -2.57
RNU6-88P-201ENST00000606801 ADGRL2O95490 1459 aa-1.01□□□□□ -2.57
RNU6-88P-201ENST00000606801 ANKRD36A6QL64 1941 aa-1.02□□□□□ -2.57
RNU6-88P-201ENST00000606801 CHD1O14646 1710 aa-1.02□□□□□ -2.57
RNU6-88P-201ENST00000606801 PDCD11Q14690 1871 aaKnown RBP-1.02□□□□□ -2.57
RNU6-88P-201ENST00000606801 C1orf167Q5SNV9 1468 aa-1.02□□□□□ -2.57
RNU6-88P-201ENST00000606801 LCN9Q8WX39 176 aa-1.02□□□□□ -2.57
RNU6-88P-201ENST00000606801 MARF1Q9Y4F3 1742 aaKnown RBP-1.03□□□□□ -2.57
RNU6-88P-201ENST00000606801 IQSEC2Q5JU85 1478 aa-1.03□□□□□ -2.57
RNU6-88P-201ENST00000606801 SCAPERQ9BY12 1400 aa-1.03□□□□□ -2.57
RNU6-88P-201ENST00000606801 PAPPA2Q9BXP8 1791 aa-1.03□□□□□ -2.58
RNU6-88P-201ENST00000606801 A0A0G2JMZ2 1700 aa-1.03□□□□□ -2.58
RNU6-88P-201ENST00000606801 UBA52P62987 128 aaKnown RBP-1.04□□□□□ -2.58
RNU6-88P-201ENST00000606801 DEFB105AQ8NG35 78 aa-1.04□□□□□ -2.58
RNU6-88P-201ENST00000606801 CC2D2AQ9P2K1 1620 aa-1.04□□□□□ -2.58
RNU6-88P-201ENST00000606801 MRC2Q9UBG0 1479 aa-1.05□□□□□ -2.58
RNU6-88P-201ENST00000606801 M0R2T5 61 aa-1.05□□□□□ -2.58
RNU6-88P-201ENST00000606801 SPINK4O60575 86 aa-1.05□□□□□ -2.58
RNU6-88P-201ENST00000606801 UBE2D3P61077 147 aa-1.05□□□□□ -2.58
RNU6-88P-201ENST00000606801 GNG11P61952 73 aa-1.05□□□□□ -2.58
RNU6-88P-201ENST00000606801 UBE2D2P62837 147 aa-1.05□□□□□ -2.58
RNU6-88P-201ENST00000606801 Q0VG73 95 aa-1.05□□□□□ -2.58
RNU6-88P-201ENST00000606801 WHAMMP3Q1A5X7 153 aa-1.05□□□□□ -2.58
RNU6-88P-201ENST00000606801 COL4A6Q14031 1691 aa-1.06□□□□□ -2.58
RNU6-88P-201ENST00000606801 ATP5EP56381 51 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-88P-201ENST00000606801 SFTA2Q6UW10 78 aa-1.06□□□□□ -2.58
RNU6-88P-201ENST00000606801 SETBP1Q9Y6X0 1596 aa-1.06□□□□□ -2.58
RNU6-88P-201ENST00000606801 SPHKAPQ2M3C7 1700 aa-1.06□□□□□ -2.58
RNU6-88P-201ENST00000606801 SETD2Q9BYW2 2564 aaPredicted RBP-1.06□□□□□ -2.58
RNU6-88P-201ENST00000606801 TGP01266 2768 aa-1.07□□□□□ -2.58
RNU6-88P-201ENST00000606801 NRKQ7Z2Y5 1582 aa-1.07□□□□□ -2.58
RNU6-88P-201ENST00000606801 FAM223BA6NKX1 122 aa-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms