RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 C6orf201Q7Z4U5 140 aa2.66□□□□□ -1.98
TUBE1-209ENST00000604814 LAMA4Q16363 1823 aa2.66□□□□□ -1.98
TUBE1-209ENST00000604814 ADGRB2O60241 1585 aa2.66□□□□□ -1.98
TUBE1-209ENST00000604814 RGPD2P0DJD1 1756 aa2.66□□□□□ -1.98
TUBE1-209ENST00000604814 CUX1P39880 1505 aa2.66□□□□□ -1.98
TUBE1-209ENST00000604814 BTAF1O14981 1849 aa2.66□□□□□ -1.98
TUBE1-209ENST00000604814 HCRTO43612 131 aa2.66□□□□□ -1.98
TUBE1-209ENST00000604814 BAGE3Q86Y29 109 aa2.66□□□□□ -1.98
TUBE1-209ENST00000604814 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
TUBE1-209ENST00000604814 ICE1Q9Y2F5 2266 aa2.65□□□□□ -1.98
TUBE1-209ENST00000604814 A0A087WVE0 104 aa2.65□□□□□ -1.99
TUBE1-209ENST00000604814 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
TUBE1-209ENST00000604814 TMEM131LA2VDJ0 1609 aa2.65□□□□□ -1.99
TUBE1-209ENST00000604814 SCN7AQ01118 1682 aa2.65□□□□□ -1.99
TUBE1-209ENST00000604814 KDM3BQ7LBC6 1761 aa2.64□□□□□ -1.99
TUBE1-209ENST00000604814 LOC285556D6RIA3 1793 aa2.64□□□□□ -1.99
TUBE1-209ENST00000604814 Q96NJ1 140 aa2.64□□□□□ -1.99
TUBE1-209ENST00000604814 MYO7BQ6PIF6 2116 aa2.63□□□□□ -1.99
TUBE1-209ENST00000604814 TRGV1A0A0A0MS02 117 aa2.63□□□□□ -1.99
TUBE1-209ENST00000604814 TRAV1-2A0A0B4J238 106 aa2.63□□□□□ -1.99
TUBE1-209ENST00000604814 MGPP08493 103 aa2.63□□□□□ -1.99
TUBE1-209ENST00000604814 IGKV4-1P06312 121 aa2.62□□□□□ -1.99
TUBE1-209ENST00000604814 CAV3P56539 151 aa2.62□□□□□ -1.99
TUBE1-209ENST00000604814 KRTAP12-2P59991 146 aa2.62□□□□□ -1.99
TUBE1-209ENST00000604814 Q6JHZ5 121 aa2.62□□□□□ -1.99
TUBE1-209ENST00000604814 Q6ZQY7 126 aa2.62□□□□□ -1.99
TUBE1-209ENST00000604814 OBSCN-AS1Q96MR7 158 aa2.62□□□□□ -1.99
TUBE1-209ENST00000604814 CCL19Q99731 98 aa2.62□□□□□ -1.99
TUBE1-209ENST00000604814 PHRF1Q9P1Y6 1649 aaKnown RBP2.62□□□□□ -1.99
TUBE1-209ENST00000604814 SFTA3P0C7M3 94 aa2.61□□□□□ -1.99
TUBE1-209ENST00000604814 GCHFRP30047 84 aa2.61□□□□□ -1.99
TUBE1-209ENST00000604814 ZNF137PP52743 207 aa2.61□□□□□ -1.99
TUBE1-209ENST00000604814 COL5A1P20908 1838 aaPredicted RBP2.61□□□□□ -1.99
TUBE1-209ENST00000604814 SDK1Q7Z5N4 2213 aa2.61□□□□□ -1.99
TUBE1-209ENST00000604814 A0A087WXM4 84 aa2.61□□□□□ -1.99
TUBE1-209ENST00000604814 UBE2D4Q9Y2X8 147 aa2.61□□□□□ -1.99
TUBE1-209ENST00000604814 ARFGEF2Q9Y6D5 1785 aa2.61□□□□□ -1.99
TUBE1-209ENST00000604814 TNRC6BQ9UPQ9 1833 aaKnown RBP2.6□□□□□ -1.99
TUBE1-209ENST00000604814 COX8AP10176 69 aa2.6□□□□□ -1.99
TUBE1-209ENST00000604814 INTS1Q8N201 2190 aaKnown RBP2.6□□□□□ -1.99
TUBE1-209ENST00000604814 ACYP2P14621 99 aa2.59□□□□□ -1.99
TUBE1-209ENST00000604814 DEFB107AQ8IZN7 70 aa2.59□□□□□ -1.99
TUBE1-209ENST00000604814 HILPDAQ9Y5L2 63 aa2.59□□□□□ -1.99
TUBE1-209ENST00000604814 FANCD2Q9BXW9 1451 aa2.58□□□□□ -2
TUBE1-209ENST00000604814 ASXL1Q8IXJ9 1541 aa2.58□□□□□ -2
TUBE1-209ENST00000604814 SIPA1L3O60292 1781 aaPredicted RBP2.58□□□□□ -2
TUBE1-209ENST00000604814 J3QRE1 110 aa2.58□□□□□ -2
TUBE1-209ENST00000604814 IFI27P40305 119 aaPredicted RBP2.58□□□□□ -2
TUBE1-209ENST00000604814 PP632Q6XCG6 107 aa2.58□□□□□ -2
TUBE1-209ENST00000604814 SMIM4Q8WVI0 70 aa2.58□□□□□ -2
TUBE1-209ENST00000604814 SPRR4Q96PI1 79 aa2.58□□□□□ -2
TUBE1-209ENST00000604814 LINC00846Q9NV44 126 aa2.58□□□□□ -2
TUBE1-209ENST00000604814 H3BVH4 76 aa2.57□□□□□ -2
TUBE1-209ENST00000604814 COX17Q14061 63 aa2.57□□□□□ -2
TUBE1-209ENST00000604814 ATP5EP2Q5VTU8 51 aa2.57□□□□□ -2
TUBE1-209ENST00000604814 ZMYM4Q5VZL5 1548 aa2.57□□□□□ -2
TUBE1-209ENST00000604814 ZNF236Q9UL36 1845 aa2.57□□□□□ -2
TUBE1-209ENST00000604814 DNAJC13O75165 2243 aa2.56□□□□□ -2
TUBE1-209ENST00000604814 TARBP1Q13395 1621 aaKnown RBP2.56□□□□□ -2
TUBE1-209ENST00000604814 BRD3OSQ6XYD6 125 aa2.56□□□□□ -2
TUBE1-209ENST00000604814 RGPD1P0DJD0 1748 aa2.56□□□□□ -2
TUBE1-209ENST00000604814 ITSN1Q15811 1721 aa2.55□□□□□ -2
TUBE1-209ENST00000604814 MED13LQ71F56 2210 aa2.55□□□□□ -2
TUBE1-209ENST00000604814 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
TUBE1-209ENST00000604814 KRTAP13-4Q3LI77 160 aa2.54□□□□□ -2
TUBE1-209ENST00000604814 UNQ6190/PRO20217Q6UXQ8 127 aa2.54□□□□□ -2
TUBE1-209ENST00000604814 CACNA1GO43497 2377 aa2.54□□□□□ -2
TUBE1-209ENST00000604814 LINC00472Q9H8W2 130 aa2.54□□□□□ -2
TUBE1-209ENST00000604814 GNG13Q9P2W3 67 aa2.54□□□□□ -2
TUBE1-209ENST00000604814 TRBV7-4A0A0J9YYF1 115 aa2.53□□□□□ -2
TUBE1-209ENST00000604814 H0Y9P7 68 aa2.53□□□□□ -2
TUBE1-209ENST00000604814 C3orf79P0CE67 100 aa2.53□□□□□ -2
TUBE1-209ENST00000604814 S100A3P33764 101 aa2.53□□□□□ -2
TUBE1-209ENST00000604814 SMIM5Q71RC9 77 aa2.53□□□□□ -2
TUBE1-209ENST00000604814 PLAC8Q9NZF1 115 aa2.53□□□□□ -2
TUBE1-209ENST00000604814 TOP2AP11388 1531 aaKnown RBP2.53□□□□□ -2
TUBE1-209ENST00000604814 PREX2Q70Z35 1606 aa2.52□□□□□ -2.01
TUBE1-209ENST00000604814 IFT172Q9UG01 1749 aa2.52□□□□□ -2.01
TUBE1-209ENST00000604814 TRBV30A0A0K0K1B3 111 aa2.52□□□□□ -2.01
TUBE1-209ENST00000604814 A0A1B0GUT8 65 aa2.52□□□□□ -2.01
TUBE1-209ENST00000604814 ZCCHC13Q8WW36 166 aaKnown RBP2.52□□□□□ -2.01
TUBE1-209ENST00000604814 MAP2P11137 1827 aaKnown RBP2.51□□□□□ -2.01
TUBE1-209ENST00000604814 SPINK7P58062 85 aa2.51□□□□□ -2.01
TUBE1-209ENST00000604814 DEFB103AP81534 67 aa2.51□□□□□ -2.01
TUBE1-209ENST00000604814 TMEM263Q8WUH6 116 aaKnown RBP2.51□□□□□ -2.01
TUBE1-209ENST00000604814 NCOA6Q14686 2063 aaPredicted RBP2.51□□□□□ -2.01
TUBE1-209ENST00000604814 ZFHX3Q15911 3703 aa2.51□□□□□ -2.01
TUBE1-209ENST00000604814 KRTAP10-1P60331 282 aa2.51□□□□□ -2.01
TUBE1-209ENST00000604814 NKTRP30414 1462 aaKnown RBP2.5□□□□□ -2.01
TUBE1-209ENST00000604814 ATP7BP35670 1465 aa2.5□□□□□ -2.01
TUBE1-209ENST00000604814 NUP188Q5SRE5 1749 aa2.5□□□□□ -2.01
TUBE1-209ENST00000604814 CRYBG1Q9Y4K1 1723 aa2.5□□□□□ -2.01
TUBE1-209ENST00000604814 TIAM1Q13009 1591 aa2.5□□□□□ -2.01
TUBE1-209ENST00000604814 ABCA1O95477 2261 aa2.5□□□□□ -2.01
TUBE1-209ENST00000604814 SPATA8Q6RVD6 105 aa2.5□□□□□ -2.01
TUBE1-209ENST00000604814 PRXQ9BXM0 1461 aa2.5□□□□□ -2.01
TUBE1-209ENST00000604814 SHPRHQ149N8 1683 aa2.49□□□□□ -2.01
TUBE1-209ENST00000604814 KRTAP13-3Q3SY46 172 aa2.49□□□□□ -2.01
TUBE1-209ENST00000604814 C10orf113Q5VZT2 155 aa2.49□□□□□ -2.01
TUBE1-209ENST00000604814 C10orf99Q6UWK7 81 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms