RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 TRBV12-3P01733 135 aa5.49□□□□□ -1.53
HCG18-244ENST00000602516 PRSS1P07477 247 aa5.49□□□□□ -1.53
HCG18-244ENST00000602516 FUSP35637 526 aaKnown RBP eCLIP5.49□□□□□ -1.53
HCG18-244ENST00000602516 BLCAPP62952 87 aa5.49□□□□□ -1.53
HCG18-244ENST00000602516 C7orf65Q6ZTY9 151 aa5.49□□□□□ -1.53
HCG18-244ENST00000602516 IGHV3-49A0A0A0MS15 119 aa5.48□□□□□ -1.53
HCG18-244ENST00000602516 CKS2P33552 79 aa5.48□□□□□ -1.53
HCG18-244ENST00000602516 PTPN13Q12923 2485 aa5.48□□□□□ -1.53
HCG18-244ENST00000602516 A8MU10 97 aa5.48□□□□□ -1.53
HCG18-244ENST00000602516 D6R8Y8 96 aa5.48□□□□□ -1.53
HCG18-244ENST00000602516 SOCS3O14543 225 aa5.48□□□□□ -1.53
HCG18-244ENST00000602516 NDUFC1O43677 76 aa5.48□□□□□ -1.53
HCG18-244ENST00000602516 MRPL51Q4U2R6 128 aaKnown RBP5.48□□□□□ -1.53
HCG18-244ENST00000602516 PIK3CD-AS1Q5SR53 167 aa5.48□□□□□ -1.53
HCG18-244ENST00000602516 C11orf72Q8NBR9 251 aa5.48□□□□□ -1.53
HCG18-244ENST00000602516 KLK15Q9H2R5 256 aa5.48□□□□□ -1.53
HCG18-244ENST00000602516 ESM1Q9NQ30 184 aa5.48□□□□□ -1.53
HCG18-244ENST00000602516 SPTAN1Q13813 2472 aaKnown RBP5.48□□□□□ -1.53
HCG18-244ENST00000602516 IGKV3D-20A0A0C4DH25 116 aa5.47□□□□□ -1.53
HCG18-244ENST00000602516 LOC389332A0A1B0GUA5 103 aa5.47□□□□□ -1.53
HCG18-244ENST00000602516 TMEM223A0PJW6 202 aa5.47□□□□□ -1.53
HCG18-244ENST00000602516 H0Y9J4 135 aa5.47□□□□□ -1.53
HCG18-244ENST00000602516 ORMDL3Q8N138 153 aa5.47□□□□□ -1.53
HCG18-244ENST00000602516 LENEPQ9Y5L5 61 aa5.47□□□□□ -1.53
HCG18-244ENST00000602516 IGKV3D-7A0A0C4DH55 119 aa5.47□□□□□ -1.53
HCG18-244ENST00000602516 MP68P56378 58 aa5.47□□□□□ -1.53
HCG18-244ENST00000602516 NKAPP1Q8N9T2 125 aa5.47□□□□□ -1.53
HCG18-244ENST00000602516 C11orf21Q9P2W6 132 aa5.47□□□□□ -1.53
HCG18-244ENST00000602516 CSMD2Q7Z408 3487 aa5.46□□□□□ -1.53
HCG18-244ENST00000602516 LINC01546A6NGU7 62 aa5.46□□□□□ -1.53
HCG18-244ENST00000602516 COX6B1P14854 86 aa5.46□□□□□ -1.53
HCG18-244ENST00000602516 RNF185Q96GF1 192 aa5.46□□□□□ -1.53
HCG18-244ENST00000602516 CELSR2Q9HCU4 2923 aa5.46□□□□□ -1.54
HCG18-244ENST00000602516 HECTD1Q9ULT8 2610 aa5.46□□□□□ -1.54
HCG18-244ENST00000602516 A0A0J9YY99 117 aa5.46□□□□□ -1.54
HCG18-244ENST00000602516 TRIAP1O43715 76 aa5.46□□□□□ -1.54
HCG18-244ENST00000602516 BCE1O60756 84 aa5.46□□□□□ -1.54
HCG18-244ENST00000602516 RMI2Q96E14 147 aa5.46□□□□□ -1.54
HCG18-244ENST00000602516 MSRB1Q9NZV6 116 aa5.46□□□□□ -1.54
HCG18-244ENST00000602516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.46□□□□□ -1.54
HCG18-244ENST00000602516 IGHV7-4-1A0A0J9YVY3 117 aa5.45□□□□□ -1.54
HCG18-244ENST00000602516 IGHV4-4A0A075B6R2 117 aa5.45□□□□□ -1.54
HCG18-244ENST00000602516 IGHV3-11P01762 117 aa5.45□□□□□ -1.54
HCG18-244ENST00000602516 RNASE4P34096 147 aaKnown RBP5.45□□□□□ -1.54
HCG18-244ENST00000602516 LINC01554Q52M75 96 aa5.45□□□□□ -1.54
HCG18-244ENST00000602516 UTP20O75691 2785 aaKnown RBP5.45□□□□□ -1.54
HCG18-244ENST00000602516 TRAV7A0A075B6U4 112 aa5.45□□□□□ -1.54
HCG18-244ENST00000602516 ZNF815PA8K554 130 aa5.45□□□□□ -1.54
HCG18-244ENST00000602516 RNASE1P07998 156 aaKnown RBP5.45□□□□□ -1.54
HCG18-244ENST00000602516 SYCNQ0VAF6 134 aa5.45□□□□□ -1.54
HCG18-244ENST00000602516 DEFB112Q30KQ8 113 aa5.45□□□□□ -1.54
HCG18-244ENST00000602516 Q6ZRP5 223 aa5.45□□□□□ -1.54
HCG18-244ENST00000602516 FSHBP01225 129 aa5.44□□□□□ -1.54
HCG18-244ENST00000602516 IGHV4-59P01825 116 aa5.44□□□□□ -1.54
HCG18-244ENST00000602516 PLNP26678 52 aa5.44□□□□□ -1.54
HCG18-244ENST00000602516 CRYBG3Q68DQ2 2970 aa5.44□□□□□ -1.54
HCG18-244ENST00000602516 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.44□□□□□ -1.54
HCG18-244ENST00000602516 PRR9Q5T870 116 aa5.44□□□□□ -1.54
HCG18-244ENST00000602516 ATP11AUNQ6ZP68 121 aa5.44□□□□□ -1.54
HCG18-244ENST00000602516 Q6ZSV7 163 aa5.44□□□□□ -1.54
HCG18-244ENST00000602516 ZFAND2AQ8N6M9 145 aa5.44□□□□□ -1.54
HCG18-244ENST00000602516 FLNBO75369 2602 aaKnown RBP5.44□□□□□ -1.54
HCG18-244ENST00000602516 FBN2P35556 2912 aa5.43□□□□□ -1.54
HCG18-244ENST00000602516 RPL28P46779 137 aaKnown RBP5.43□□□□□ -1.54
HCG18-244ENST00000602516 RHPN1-AS1Q9BWJ2 59 aa5.43□□□□□ -1.54
HCG18-244ENST00000602516 CR1P17927 2039 aa5.43□□□□□ -1.54
HCG18-244ENST00000602516 MIFP14174 115 aa5.43□□□□□ -1.54
HCG18-244ENST00000602516 C16orf90A8MZG2 172 aa5.42□□□□□ -1.54
HCG18-244ENST00000602516 H7C2G1 150 aa5.42□□□□□ -1.54
HCG18-244ENST00000602516 GAS8-AS1O95177 125 aa5.42□□□□□ -1.54
HCG18-244ENST00000602516 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
HCG18-244ENST00000602516 SPG11Q96JI7 2443 aa5.42□□□□□ -1.54
HCG18-244ENST00000602516 ADAMTSL4-AS1Q5T5F5 129 aa5.42□□□□□ -1.54
HCG18-244ENST00000602516 IGLV2-18A0A075B6J9 118 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 TRAV21A0A0B4J279 112 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 IGHV4-31P0DP07 118 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 Q6YL49 198 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 Q1RN00 199 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 UNC79Q9P2D8 2635 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 UBE2AP49459 152 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 DEFB1P60022 68 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 KRTAP10-9P60411 292 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 PRR3P79522 188 aaKnown RBP5.41□□□□□ -1.54
HCG18-244ENST00000602516 C6orf99Q4VX62 202 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 C10orf99Q6UWK7 81 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 Q75L30 129 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 LINC00269Q8N2A0 174 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 MAPK1IP1LQ8NDC0 245 aa5.41□□□□□ -1.54
HCG18-244ENST00000602516 SETXQ7Z333 2677 aaKnown RBP5.4□□□□□ -1.54
HCG18-244ENST00000602516 TRAV23DV6A0A075B6W5 121 aa5.4□□□□□ -1.54
HCG18-244ENST00000602516 CYSRT1A8MQ03 144 aa5.4□□□□□ -1.54
HCG18-244ENST00000602516 BAALC-AS2P0C853 105 aa5.4□□□□□ -1.54
HCG18-244ENST00000602516 DEFB113Q30KQ7 82 aa5.4□□□□□ -1.55
HCG18-244ENST00000602516 SPANXN1Q5VSR9 72 aa5.4□□□□□ -1.55
HCG18-244ENST00000602516 CLEC2BQ92478 149 aa5.4□□□□□ -1.55
HCG18-244ENST00000602516 ZNF702PQ9H963 129 aa5.4□□□□□ -1.55
HCG18-244ENST00000602516 ZNF706Q9Y5V0 76 aaPredicted RBP5.4□□□□□ -1.55
HCG18-244ENST00000602516 PRRC2AP48634 2157 aaKnown RBP5.4□□□□□ -1.55
HCG18-244ENST00000602516 LOC100131303A0A0U1RQF7 123 aa5.39□□□□□ -1.55
HCG18-244ENST00000602516 F8VRH5 84 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms