RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 C9orf170A2RU37 121 aa2.17□□□□□ -2.06
HERC3-213ENST00000598772 NCR2O95944 276 aa2.17□□□□□ -2.06
HERC3-213ENST00000598772 NHLH2Q02577 135 aa2.17□□□□□ -2.06
HERC3-213ENST00000598772 SSBP1Q04837 148 aaKnown RBP2.17□□□□□ -2.06
HERC3-213ENST00000598772 NEDD8Q15843 81 aa2.17□□□□□ -2.06
HERC3-213ENST00000598772 GAGE2AQ6NT46 116 aa2.17□□□□□ -2.06
HERC3-213ENST00000598772 PQLC2Q6ZP29 291 aa2.17□□□□□ -2.06
HERC3-213ENST00000598772 ATP11AUNQ6ZP68 121 aa2.17□□□□□ -2.06
HERC3-213ENST00000598772 Q6ZVH6 145 aa2.17□□□□□ -2.06
HERC3-213ENST00000598772 RPL39LQ96EH5 51 aaKnown RBP2.17□□□□□ -2.06
HERC3-213ENST00000598772 MRAP2Q96G30 205 aa2.17□□□□□ -2.06
HERC3-213ENST00000598772 ZNF706Q9Y5V0 76 aaPredicted RBP2.17□□□□□ -2.06
HERC3-213ENST00000598772 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
HERC3-213ENST00000598772 FXYD6-FXYD2A0A087WZ82 144 aa2.16□□□□□ -2.06
HERC3-213ENST00000598772 ANKRD20A5PA0PJZ0 165 aa2.16□□□□□ -2.06
HERC3-213ENST00000598772 RGS5O15539 181 aa2.16□□□□□ -2.06
HERC3-213ENST00000598772 TAGLN2P37802 199 aaKnown RBP2.16□□□□□ -2.06
HERC3-213ENST00000598772 AQP4P55087 323 aa2.16□□□□□ -2.06
HERC3-213ENST00000598772 CKS1BP61024 79 aa2.16□□□□□ -2.06
HERC3-213ENST00000598772 RPS29P62273 56 aaKnown RBP2.16□□□□□ -2.06
HERC3-213ENST00000598772 SSBP3-AS1Q7Z2R9 100 aa2.16□□□□□ -2.06
HERC3-213ENST00000598772 LINC01551Q86U37 167 aa2.16□□□□□ -2.06
HERC3-213ENST00000598772 SCGB1C1Q8TD33 95 aa2.16□□□□□ -2.06
HERC3-213ENST00000598772 KRTAP4-3Q9BYR4 195 aa2.16□□□□□ -2.06
HERC3-213ENST00000598772 TMEM242Q9NWH2 141 aa2.16□□□□□ -2.06
HERC3-213ENST00000598772 TOMM7Q9P0U1 55 aa2.16□□□□□ -2.06
HERC3-213ENST00000598772 SDHAF1A6NFY7 115 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 I3L3M4 83 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 PEX7O00628 323 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 NOL3O60936 208 aaKnown RBP2.15□□□□□ -2.07
HERC3-213ENST00000598772 PRSS2P07478 247 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 UBE2G1P62253 170 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 MRPS10P82664 201 aaKnown RBP2.15□□□□□ -2.07
HERC3-213ENST00000598772 KIAA1644Q3SXP7 199 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 C9orf153Q5TBE3 101 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 FAM231DQ6ZW35 169 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 GATD1Q8NB37 220 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 SMIM4Q8WVI0 70 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 ALKBH7Q9BT30 221 aaPredicted RBP2.15□□□□□ -2.07
HERC3-213ENST00000598772 FUNDC2Q9BWH2 189 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 TMEM126AQ9H061 195 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 ZFP30Q9Y2G7 519 aa2.15□□□□□ -2.07
HERC3-213ENST00000598772 SNAI2O43623 268 aa2.14□□□□□ -2.07
HERC3-213ENST00000598772 GCHFRP30047 84 aa2.14□□□□□ -2.07
HERC3-213ENST00000598772 FAUP35544 74 aaKnown RBP2.14□□□□□ -2.07
HERC3-213ENST00000598772 VBP1P61758 197 aa2.14□□□□□ -2.07
HERC3-213ENST00000598772 KIAA0087Q14695 138 aa2.14□□□□□ -2.07
HERC3-213ENST00000598772 C6orf226Q5I0X4 101 aa2.14□□□□□ -2.07
HERC3-213ENST00000598772 AKAP14Q86UN6 197 aa2.14□□□□□ -2.07
HERC3-213ENST00000598772 SMCR5Q8TEV8 140 aa2.14□□□□□ -2.07
HERC3-213ENST00000598772 WDR61Q9GZS3 305 aaKnown RBP2.14□□□□□ -2.07
HERC3-213ENST00000598772 GEMIN7Q9H840 131 aaKnown RBP2.14□□□□□ -2.07
HERC3-213ENST00000598772 MED9Q9NWA0 146 aa2.14□□□□□ -2.07
HERC3-213ENST00000598772 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
HERC3-213ENST00000598772 TGIF2-C20orf24A0A0A6YYL0 155 aa2.13□□□□□ -2.07
HERC3-213ENST00000598772 TRGC1P0CF51 173 aa2.13□□□□□ -2.07
HERC3-213ENST00000598772 FHITP49789 147 aa2.13□□□□□ -2.07
HERC3-213ENST00000598772 RAB5BP61020 215 aa2.13□□□□□ -2.07
HERC3-213ENST00000598772 KRTAP15-1Q3LI76 137 aa2.13□□□□□ -2.07
HERC3-213ENST00000598772 LCE1AQ5T7P2 110 aa2.13□□□□□ -2.07
HERC3-213ENST00000598772 Q6ZUT4 128 aa2.13□□□□□ -2.07
HERC3-213ENST00000598772 FAM19A3Q7Z5A8 133 aa2.13□□□□□ -2.07
HERC3-213ENST00000598772 MRPL52Q86TS9 123 aaKnown RBP2.13□□□□□ -2.07
HERC3-213ENST00000598772 RAB26Q9ULW5 256 aa2.13□□□□□ -2.07
HERC3-213ENST00000598772 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 IGHV3OR16-9A0A0B4J2B5 98 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 C7orf77A4D0Y5 90 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 RAB19A4D1S5 217 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 M0R378 163 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 FCER1GP30273 86 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 CDC34P49427 236 aaPredicted RBP2.12□□□□□ -2.07
HERC3-213ENST00000598772 TWIST1Q15672 202 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 C6orf99Q4VX62 202 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 MZT2BQ6NZ67 158 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 RAB24Q969Q5 203 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 LIMD2Q9BT23 127 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 SMIM3Q9BZL3 60 aa2.12□□□□□ -2.07
HERC3-213ENST00000598772 RNASE7Q9H1E1 156 aaKnown RBP2.12□□□□□ -2.07
HERC3-213ENST00000598772 IFITM10A6NMD0 228 aa2.11□□□□□ -2.07
HERC3-213ENST00000598772 INMT-MINDY4F8WBC2 141 aa2.11□□□□□ -2.07
HERC3-213ENST00000598772 AP3S2P59780 193 aa2.11□□□□□ -2.07
HERC3-213ENST00000598772 SMAGPQ0VAQ4 97 aa2.11□□□□□ -2.07
HERC3-213ENST00000598772 RAB32Q13637 225 aa2.11□□□□□ -2.07
HERC3-213ENST00000598772 TOMM5Q8N4H5 51 aa2.11□□□□□ -2.07
HERC3-213ENST00000598772 FMC1Q96HJ9 113 aa2.11□□□□□ -2.07
HERC3-213ENST00000598772 ST20Q9HBF5 79 aa2.11□□□□□ -2.07
HERC3-213ENST00000598772 TMEM167BQ9NRX6 74 aa2.11□□□□□ -2.07
HERC3-213ENST00000598772 H7C2G1 150 aa2.1□□□□□ -2.07
HERC3-213ENST00000598772 CXorf1O96002 111 aa2.1□□□□□ -2.07
HERC3-213ENST00000598772 IFNA1P01562 189 aa2.1□□□□□ -2.07
HERC3-213ENST00000598772 CXCL1P09341 107 aa2.1□□□□□ -2.07
HERC3-213ENST00000598772 STOML3Q8TAV4 291 aa2.1□□□□□ -2.07
HERC3-213ENST00000598772 HIST1H2BAQ96A08 127 aa2.1□□□□□ -2.07
HERC3-213ENST00000598772 A0A1W2PRE2 83 aa2.09□□□□□ -2.07
HERC3-213ENST00000598772 LTAP01374 205 aa2.09□□□□□ -2.07
HERC3-213ENST00000598772 STAG3L2P0CL84 134 aa2.09□□□□□ -2.07
HERC3-213ENST00000598772 STAG3L3P0CL85 134 aa2.09□□□□□ -2.07
HERC3-213ENST00000598772 AKR1C3P42330 323 aa2.09□□□□□ -2.07
HERC3-213ENST00000598772 RAB14P61106 215 aa2.09□□□□□ -2.07
HERC3-213ENST00000598772 PYDC2Q56P42 97 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms