RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 HIVEP2P31629 2446 aa12.3□□□□□ -0.44
SMARCA4-215ENST00000590574 DIRC1Q969H9 104 aa12.29□□□□□ -0.44
SMARCA4-215ENST00000590574 MYO9AB2RTY4 2548 aa12.29□□□□□ -0.44
SMARCA4-215ENST00000590574 CCDC168Q8NDH2 2452 aa12.28□□□□□ -0.44
SMARCA4-215ENST00000590574 LAMA1P25391 3075 aa12.28□□□□□ -0.44
SMARCA4-215ENST00000590574 CCL18P55774 89 aa12.27□□□□□ -0.44
SMARCA4-215ENST00000590574 hADV29S1A0JD25 119 aa12.27□□□□□ -0.44
SMARCA4-215ENST00000590574 C11orf72Q8NBR9 251 aa12.26□□□□□ -0.45
SMARCA4-215ENST00000590574 CSDC2Q9Y534 153 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-215ENST00000590574 PRRC2AP48634 2157 aaKnown RBP12.25□□□□□ -0.45
SMARCA4-215ENST00000590574 HIGD2BQ4VC39 106 aa12.25□□□□□ -0.45
SMARCA4-215ENST00000590574 IGLV4-60A0A075B6I1 120 aa12.25□□□□□ -0.45
SMARCA4-215ENST00000590574 UQCRQO14949 82 aa12.25□□□□□ -0.45
SMARCA4-215ENST00000590574 SONP18583 2426 aaKnown RBP12.25□□□□□ -0.45
SMARCA4-215ENST00000590574 FAM240AA0A1B0GVK7 77 aa12.25□□□□□ -0.45
SMARCA4-215ENST00000590574 Q9UF83 564 aa12.24□□□□□ -0.45
SMARCA4-215ENST00000590574 PIEZO1Q92508 2521 aa12.24□□□□□ -0.45
SMARCA4-215ENST00000590574 Q6Q795 121 aa12.24□□□□□ -0.45
SMARCA4-215ENST00000590574 H3BQ85 93 aa12.24□□□□□ -0.45
SMARCA4-215ENST00000590574 C3orf22Q8N5N4 141 aa12.24□□□□□ -0.45
SMARCA4-215ENST00000590574 IMUPQ9GZP8 106 aa12.24□□□□□ -0.45
SMARCA4-215ENST00000590574 TRAV23DV6A0A075B6W5 121 aa12.24□□□□□ -0.45
SMARCA4-215ENST00000590574 M0QXV9 152 aa12.24□□□□□ -0.45
SMARCA4-215ENST00000590574 C6orf99Q4VX62 202 aa12.24□□□□□ -0.45
SMARCA4-215ENST00000590574 CHD8Q9HCK8 2581 aa12.23□□□□□ -0.45
SMARCA4-215ENST00000590574 CD164L2Q6UWJ8 174 aa12.23□□□□□ -0.45
SMARCA4-215ENST00000590574 CLUHP3Q96NS8 147 aa12.22□□□□□ -0.45
SMARCA4-215ENST00000590574 COX7BP24311 80 aa12.22□□□□□ -0.45
SMARCA4-215ENST00000590574 J3KT08 172 aa12.22□□□□□ -0.45
SMARCA4-215ENST00000590574 RMI2Q96E14 147 aa12.22□□□□□ -0.45
SMARCA4-215ENST00000590574 LINC00526Q96FQ7 95 aa12.21□□□□□ -0.45
SMARCA4-215ENST00000590574 NOTCH2Q04721 2471 aa12.21□□□□□ -0.45
SMARCA4-215ENST00000590574 IGHV4-28A0A0C4DH34 117 aa12.21□□□□□ -0.46
SMARCA4-215ENST00000590574 UPK3BQ9BT76 320 aa12.21□□□□□ -0.46
SMARCA4-215ENST00000590574 RPL28P46779 137 aaKnown RBP12.2□□□□□ -0.46
SMARCA4-215ENST00000590574 FHL2Q14192 279 aa12.2□□□□□ -0.46
SMARCA4-215ENST00000590574 IGLV1-51P01701 117 aa12.2□□□□□ -0.46
SMARCA4-215ENST00000590574 USP9XQ93008 2570 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-215ENST00000590574 A0A087WYN8 130 aa12.19□□□□□ -0.46
SMARCA4-215ENST00000590574 XAGE1AQ9HD64 81 aa12.19□□□□□ -0.46
SMARCA4-215ENST00000590574 ETDCA0A1B0GVM5 59 aa12.19□□□□□ -0.46
SMARCA4-215ENST00000590574 Q8IZM0 81 aa12.19□□□□□ -0.46
SMARCA4-215ENST00000590574 A0A087WZ39 114 aa12.19□□□□□ -0.46
SMARCA4-215ENST00000590574 PLA2G2AP14555 144 aa12.19□□□□□ -0.46
SMARCA4-215ENST00000590574 ENHOQ6UWT2 76 aa12.19□□□□□ -0.46
SMARCA4-215ENST00000590574 SPTBN4Q9H254 2564 aa12.19□□□□□ -0.46
SMARCA4-215ENST00000590574 HILS1P60008 231 aa12.18□□□□□ -0.46
SMARCA4-215ENST00000590574 MRAPQ8TCY5 172 aa12.18□□□□□ -0.46
SMARCA4-215ENST00000590574 USP9YO00507 2555 aaPredicted RBP12.18□□□□□ -0.46
SMARCA4-215ENST00000590574 NREPQ16612 68 aa12.17□□□□□ -0.46
SMARCA4-215ENST00000590574 UBE2BP63146 152 aa12.17□□□□□ -0.46
SMARCA4-215ENST00000590574 IGLV5-39A0A0G2JS06 123 aa12.17□□□□□ -0.46
SMARCA4-215ENST00000590574 INAFM1C9JVW0 142 aa12.16□□□□□ -0.46
SMARCA4-215ENST00000590574 MIFP14174 115 aa12.16□□□□□ -0.46
SMARCA4-215ENST00000590574 PDE6GP18545 87 aa12.16□□□□□ -0.46
SMARCA4-215ENST00000590574 FUSP35637 526 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMARCA4-215ENST00000590574 Q8N2B8 174 aa12.16□□□□□ -0.46
SMARCA4-215ENST00000590574 NTM-AS1Q6ZSK4 140 aa12.15□□□□□ -0.46
SMARCA4-215ENST00000590574 SPTBN5Q9NRC6 3674 aaKnown RBP12.15□□□□□ -0.46
SMARCA4-215ENST00000590574 ZNF575Q86XF7 245 aa12.14□□□□□ -0.47
SMARCA4-215ENST00000590574 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
SMARCA4-215ENST00000590574 PRR3P79522 188 aaKnown RBP12.13□□□□□ -0.47
SMARCA4-215ENST00000590574 ATP5EP2Q5VTU8 51 aa12.13□□□□□ -0.47
SMARCA4-215ENST00000590574 COX17Q14061 63 aa12.13□□□□□ -0.47
SMARCA4-215ENST00000590574 TLN2Q9Y4G6 2542 aa12.13□□□□□ -0.47
SMARCA4-215ENST00000590574 C9orf116Q5BN46 136 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-215ENST00000590574 VPS13AQ96RL7 3174 aa12.12□□□□□ -0.47
SMARCA4-215ENST00000590574 LY6G6DO95868 133 aa12.11□□□□□ -0.47
SMARCA4-215ENST00000590574 LINC00337Q8N6G1 96 aa12.11□□□□□ -0.47
SMARCA4-215ENST00000590574 FAM110AQ9BQ89 295 aa12.11□□□□□ -0.47
SMARCA4-215ENST00000590574 IGLV5-45A0A087WSX0 123 aa12.11□□□□□ -0.47
SMARCA4-215ENST00000590574 KIR2DL5BQ8NHK3 375 aa12.11□□□□□ -0.47
SMARCA4-215ENST00000590574 CELSR3Q9NYQ7 3312 aa12.1□□□□□ -0.47
SMARCA4-215ENST00000590574 USP17L23D6RBM5 183 aa12.1□□□□□ -0.47
SMARCA4-215ENST00000590574 LELP1Q5T871 98 aa12.1□□□□□ -0.47
SMARCA4-215ENST00000590574 MYO18BQ8IUG5 2567 aa12.1□□□□□ -0.47
SMARCA4-215ENST00000590574 Q6ZQY7 126 aa12.1□□□□□ -0.47
SMARCA4-215ENST00000590574 SMR3AQ99954 134 aa12.1□□□□□ -0.47
SMARCA4-215ENST00000590574 SCXQ7RTU7 201 aa12.1□□□□□ -0.47
SMARCA4-215ENST00000590574 C20orf197Q8N268 126 aa12.1□□□□□ -0.47
SMARCA4-215ENST00000590574 COX7CP15954 63 aa12.09□□□□□ -0.47
SMARCA4-215ENST00000590574 WFDC9Q8NEX5 89 aa12.09□□□□□ -0.47
SMARCA4-215ENST00000590574 LITAFQ99732 161 aa12.09□□□□□ -0.47
SMARCA4-215ENST00000590574 Q6JHZ5 121 aa12.09□□□□□ -0.47
SMARCA4-215ENST00000590574 C16orf95Q9H693 158 aa12.08□□□□□ -0.48
SMARCA4-215ENST00000590574 SERP2Q8N6R1 65 aa12.08□□□□□ -0.48
SMARCA4-215ENST00000590574 ABCA2Q9BZC7 2435 aa12.08□□□□□ -0.48
SMARCA4-215ENST00000590574 CYSRT1A8MQ03 144 aa12.07□□□□□ -0.48
SMARCA4-215ENST00000590574 UNQ6190/PRO20217Q6UXQ8 127 aa12.07□□□□□ -0.48
SMARCA4-215ENST00000590574 Q8N814 137 aa12.07□□□□□ -0.48
SMARCA4-215ENST00000590574 CCKP06307 115 aa12.07□□□□□ -0.48
SMARCA4-215ENST00000590574 SOSTDC1Q6X4U4 206 aa12.07□□□□□ -0.48
SMARCA4-215ENST00000590574 SPEGQ15772 3267 aa12.06□□□□□ -0.48
SMARCA4-215ENST00000590574 WDFY4Q6ZS81 3184 aa12.06□□□□□ -0.48
SMARCA4-215ENST00000590574 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
SMARCA4-215ENST00000590574 A0A087WVE0 104 aa12.04□□□□□ -0.48
SMARCA4-215ENST00000590574 MUC4Q99102 2169 aa12.04□□□□□ -0.48
SMARCA4-215ENST00000590574 CDK2AP2O75956 126 aa12.03□□□□□ -0.48
SMARCA4-215ENST00000590574 SETD2Q9BYW2 2564 aaPredicted RBP12.03□□□□□ -0.48
SMARCA4-215ENST00000590574 A0A1B0GUV1 79 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms