RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 LINC00269Q8N2A0 174 aa12.12□□□□□ -0.47
RBFOX1-222ENST00000585867 UPK3BQ9BT76 320 aa12.12□□□□□ -0.47
RBFOX1-222ENST00000585867 IGKV2D-26A0A0A0MRZ7 120 aa12.11□□□□□ -0.47
RBFOX1-222ENST00000585867 REG3AQ06141 175 aa12.11□□□□□ -0.47
RBFOX1-222ENST00000585867 PLEKHB2Q96CS7 222 aa12.11□□□□□ -0.47
RBFOX1-222ENST00000585867 LCE6AA0A183 80 aa12.1□□□□□ -0.47
RBFOX1-222ENST00000585867 LEPROTO15243 131 aa12.1□□□□□ -0.47
RBFOX1-222ENST00000585867 LINC01556Q5JQF7 62 aa12.1□□□□□ -0.47
RBFOX1-222ENST00000585867 BOD1L2Q8IYS8 172 aa12.1□□□□□ -0.47
RBFOX1-222ENST00000585867 Q9H8V8 135 aa12.1□□□□□ -0.47
RBFOX1-222ENST00000585867 CDKN2A-AS1Q9UH64 79 aa12.1□□□□□ -0.47
RBFOX1-222ENST00000585867 IGHV3-30P01768 117 aa12.09□□□□□ -0.47
RBFOX1-222ENST00000585867 IGHV3-33P01772 117 aa12.09□□□□□ -0.47
RBFOX1-222ENST00000585867 IGHV3-30-3P0DP02 117 aa12.09□□□□□ -0.47
RBFOX1-222ENST00000585867 IGHV3-30-5P0DP03 117 aa12.09□□□□□ -0.47
RBFOX1-222ENST00000585867 HNRNPA3P51991 378 aaKnown RBP12.09□□□□□ -0.47
RBFOX1-222ENST00000585867 IGHV1-58A0A0C4DH39 117 aa12.09□□□□□ -0.47
RBFOX1-222ENST00000585867 SIVA1O15304 175 aa12.09□□□□□ -0.47
RBFOX1-222ENST00000585867 CRPP02741 224 aa12.09□□□□□ -0.47
RBFOX1-222ENST00000585867 COX6A2Q02221 97 aa12.09□□□□□ -0.47
RBFOX1-222ENST00000585867 Q8N3U1 123 aa12.09□□□□□ -0.47
RBFOX1-222ENST00000585867 PRR34Q9NV39 138 aa12.09□□□□□ -0.47
RBFOX1-222ENST00000585867 DNAH10OSP0CZ25 163 aa12.08□□□□□ -0.48
RBFOX1-222ENST00000585867 LGALS3P17931 250 aaKnown RBP12.08□□□□□ -0.48
RBFOX1-222ENST00000585867 CLPSL2Q6UWE3 100 aa12.08□□□□□ -0.48
RBFOX1-222ENST00000585867 PCP2Q8IVA1 136 aa12.08□□□□□ -0.48
RBFOX1-222ENST00000585867 KLK12Q9UKR0 248 aa12.08□□□□□ -0.48
RBFOX1-222ENST00000585867 J3QQQ9 107 aa12.07□□□□□ -0.48
RBFOX1-222ENST00000585867 TRAV8-4A0A0B4J246 113 aa12.06□□□□□ -0.48
RBFOX1-222ENST00000585867 SPINK8P0C7L1 97 aa12.06□□□□□ -0.48
RBFOX1-222ENST00000585867 IGHV3OR16-9A0A0B4J2B5 98 aa12.05□□□□□ -0.48
RBFOX1-222ENST00000585867 CD164L2Q6UWJ8 174 aa12.05□□□□□ -0.48
RBFOX1-222ENST00000585867 LINC01561Q8N1V8 128 aa12.05□□□□□ -0.48
RBFOX1-222ENST00000585867 MYMXA0A1B0GTQ4 84 aa12.05□□□□□ -0.48
RBFOX1-222ENST00000585867 XCL1P47992 114 aa12.05□□□□□ -0.48
RBFOX1-222ENST00000585867 MIAQ16674 131 aa12.05□□□□□ -0.48
RBFOX1-222ENST00000585867 IGHV3-64A0A075B6Q5 118 aa12.04□□□□□ -0.48
RBFOX1-222ENST00000585867 A0A087WZ39 114 aa12.04□□□□□ -0.48
RBFOX1-222ENST00000585867 ZNF815PA8K554 130 aa12.04□□□□□ -0.48
RBFOX1-222ENST00000585867 SMIM1B2RUZ4 78 aa12.04□□□□□ -0.48
RBFOX1-222ENST00000585867 CHCHD10Q8WYQ3 142 aaPredicted RBP12.04□□□□□ -0.48
RBFOX1-222ENST00000585867 TRAV8-3A0A0A6YYJ7 113 aa12.03□□□□□ -0.48
RBFOX1-222ENST00000585867 IGLV5-39A0A0G2JS06 123 aa12.03□□□□□ -0.48
RBFOX1-222ENST00000585867 ENHOQ6UWT2 76 aa12.02□□□□□ -0.49
RBFOX1-222ENST00000585867 C10orf126Q8N4M7 172 aa12.02□□□□□ -0.49
RBFOX1-222ENST00000585867 UBE2WQ96B02 151 aa12.02□□□□□ -0.49
RBFOX1-222ENST00000585867 K7EP13 123 aa12.01□□□□□ -0.49
RBFOX1-222ENST00000585867 TSPEAR-AS2P59090 65 aa12.01□□□□□ -0.49
RBFOX1-222ENST00000585867 MAPKAPK5-AS1Q8N8E1 139 aa12.01□□□□□ -0.49
RBFOX1-222ENST00000585867 TTTY13Q9BZ97 58 aa12.01□□□□□ -0.49
RBFOX1-222ENST00000585867 HIGD1BQ9P298 99 aa12.01□□□□□ -0.49
RBFOX1-222ENST00000585867 LINC00587B1AMM8 73 aa12.01□□□□□ -0.49
RBFOX1-222ENST00000585867 M0R2N4 97 aa12.01□□□□□ -0.49
RBFOX1-222ENST00000585867 COX7A2LO14548 114 aa12.01□□□□□ -0.49
RBFOX1-222ENST00000585867 TP73-AS1Q9UF72 201 aa12.01□□□□□ -0.49
RBFOX1-222ENST00000585867 ALMS1Q8TCU4 4167 aa12□□□□□ -0.49
RBFOX1-222ENST00000585867 IGLV10-54A0A075B6I4 117 aa12□□□□□ -0.49
RBFOX1-222ENST00000585867 NBDYA0A0U1RRE5 68 aa12□□□□□ -0.49
RBFOX1-222ENST00000585867 C5orf38Q86SI9 138 aa12□□□□□ -0.49
RBFOX1-222ENST00000585867 VPS13DQ5THJ4 4388 aa11.99□□□□□ -0.49
RBFOX1-222ENST00000585867 CTAG1AP78358 180 aa11.99□□□□□ -0.49
RBFOX1-222ENST00000585867 SCGB1D4Q6XE38 83 aa11.99□□□□□ -0.49
RBFOX1-222ENST00000585867 C2orf91Q6ZV80 131 aa11.99□□□□□ -0.49
RBFOX1-222ENST00000585867 FOXI1Q12951 378 aa11.98□□□□□ -0.49
RBFOX1-222ENST00000585867 NDUFA12Q9UI09 145 aa11.98□□□□□ -0.49
RBFOX1-222ENST00000585867 GAGE12HA6NDE8 117 aa11.97□□□□□ -0.49
RBFOX1-222ENST00000585867 MALP21145 153 aa11.97□□□□□ -0.49
RBFOX1-222ENST00000585867 TTC32Q5I0X7 151 aa11.97□□□□□ -0.49
RBFOX1-222ENST00000585867 IBA57-AS1B1ANH7 110 aa11.96□□□□□ -0.49
RBFOX1-222ENST00000585867 NDUFA1O15239 70 aa11.96□□□□□ -0.49
RBFOX1-222ENST00000585867 APOMO95445 188 aa11.96□□□□□ -0.49
RBFOX1-222ENST00000585867 SFTA2Q6UW10 78 aa11.96□□□□□ -0.49
RBFOX1-222ENST00000585867 Q6ZR54 194 aa11.96□□□□□ -0.49
RBFOX1-222ENST00000585867 COX7B2Q8TF08 81 aa11.96□□□□□ -0.49
RBFOX1-222ENST00000585867 C1orf43Q9BWL3 253 aa11.96□□□□□ -0.49
RBFOX1-222ENST00000585867 KRTAP1-5Q9BYS1 174 aa11.96□□□□□ -0.49
RBFOX1-222ENST00000585867 LYSTQ99698 3801 aa11.96□□□□□ -0.49
RBFOX1-222ENST00000585867 RMI2Q96E14 147 aa11.95□□□□□ -0.5
RBFOX1-222ENST00000585867 DNAH1Q9P2D7 4330 aa11.94□□□□□ -0.5
RBFOX1-222ENST00000585867 M0R143 59 aa11.94□□□□□ -0.5
RBFOX1-222ENST00000585867 PRSS2P07478 247 aa11.94□□□□□ -0.5
RBFOX1-222ENST00000585867 HSD52Q0P140 79 aa11.94□□□□□ -0.5
RBFOX1-222ENST00000585867 HERV-K104P63124 156 aa11.93□□□□□ -0.5
RBFOX1-222ENST00000585867 TAL2Q16559 108 aa11.93□□□□□ -0.5
RBFOX1-222ENST00000585867 Q8IZM0 81 aa11.93□□□□□ -0.5
RBFOX1-222ENST00000585867 TOMM7Q9P0U1 55 aa11.93□□□□□ -0.5
RBFOX1-222ENST00000585867 A0A0J9YXY3 114 aa11.92□□□□□ -0.5
RBFOX1-222ENST00000585867 TMEM238C9JI98 176 aa11.92□□□□□ -0.5
RBFOX1-222ENST00000585867 ORAOV1Q8WV07 137 aa11.92□□□□□ -0.5
RBFOX1-222ENST00000585867 IGKV2D-24A0A075B6R9 120 aa11.91□□□□□ -0.5
RBFOX1-222ENST00000585867 SPANXB1Q9NS25 103 aaPredicted RBP11.91□□□□□ -0.5
RBFOX1-222ENST00000585867 CXCL5P42830 114 aa11.9□□□□□ -0.5
RBFOX1-222ENST00000585867 C6orf226Q5I0X4 101 aa11.9□□□□□ -0.5
RBFOX1-222ENST00000585867 CFAP161Q6P656 301 aa11.9□□□□□ -0.5
RBFOX1-222ENST00000585867 ZNF625Q96I27 306 aaPredicted RBP11.9□□□□□ -0.5
RBFOX1-222ENST00000585867 TIMM17BO60830 172 aa11.89□□□□□ -0.51
RBFOX1-222ENST00000585867 CIRBPQ14011 172 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-222ENST00000585867 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
RBFOX1-222ENST00000585867 HIST1H4GQ99525 98 aa11.89□□□□□ -0.51
RBFOX1-222ENST00000585867 Q9HAA7 133 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms