RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 COX8AP10176 69 aa8.61□□□□□ -1.03
VMP1-202ENST00000585847 NMUP48645 174 aa8.61□□□□□ -1.03
VMP1-202ENST00000585847 TMEM170BQ5T4T1 132 aa8.61□□□□□ -1.03
VMP1-202ENST00000585847 CDPF1Q6NVV7 123 aa8.61□□□□□ -1.03
VMP1-202ENST00000585847 OPRPNQ99935 248 aaPredicted RBP8.61□□□□□ -1.03
VMP1-202ENST00000585847 MIEN1Q9BRT3 115 aa8.61□□□□□ -1.03
VMP1-202ENST00000585847 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
VMP1-202ENST00000585847 A0A0J9YXV3 536 aa8.6□□□□□ -1.03
VMP1-202ENST00000585847 hDV102S1A0JD36 115 aa8.6□□□□□ -1.03
VMP1-202ENST00000585847 SIVA1O15304 175 aa8.6□□□□□ -1.03
VMP1-202ENST00000585847 CRPP02741 224 aa8.6□□□□□ -1.03
VMP1-202ENST00000585847 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
VMP1-202ENST00000585847 ZNF22P17026 224 aaPredicted RBP8.6□□□□□ -1.03
VMP1-202ENST00000585847 MIAQ16674 131 aa8.6□□□□□ -1.03
VMP1-202ENST00000585847 LINC00242Q5T6M2 205 aa8.6□□□□□ -1.03
VMP1-202ENST00000585847 BOD1L2Q8IYS8 172 aa8.6□□□□□ -1.03
VMP1-202ENST00000585847 LINC00469Q8N7U9 141 aa8.6□□□□□ -1.03
VMP1-202ENST00000585847 IGLV4-60A0A075B6I1 120 aa8.59□□□□□ -1.03
VMP1-202ENST00000585847 TRAV13-1A0A0B4J241 112 aa8.59□□□□□ -1.03
VMP1-202ENST00000585847 TMEM223A0PJW6 202 aa8.59□□□□□ -1.03
VMP1-202ENST00000585847 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.03
VMP1-202ENST00000585847 REG3AQ06141 175 aa8.59□□□□□ -1.03
VMP1-202ENST00000585847 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
VMP1-202ENST00000585847 LINC00959A0A1B0GUT2 108 aa8.58□□□□□ -1.04
VMP1-202ENST00000585847 DDTP30046 118 aa8.58□□□□□ -1.04
VMP1-202ENST00000585847 STPG4Q8N801 248 aa8.58□□□□□ -1.04
VMP1-202ENST00000585847 PCLOQ9Y6V0 5065 aa8.57□□□□□ -1.04
VMP1-202ENST00000585847 LEPROTO15243 131 aa8.57□□□□□ -1.04
VMP1-202ENST00000585847 GCSHP23434 173 aa8.57□□□□□ -1.04
VMP1-202ENST00000585847 ANKRD39Q53RE8 183 aa8.57□□□□□ -1.04
VMP1-202ENST00000585847 CD164L2Q6UWJ8 174 aa8.57□□□□□ -1.04
VMP1-202ENST00000585847 FRAS1Q86XX4 4008 aa8.57□□□□□ -1.04
VMP1-202ENST00000585847 A0A087WZ39 114 aa8.56□□□□□ -1.04
VMP1-202ENST00000585847 IGLV5-39A0A0G2JS06 123 aa8.56□□□□□ -1.04
VMP1-202ENST00000585847 LGALS3P17931 250 aaKnown RBP8.56□□□□□ -1.04
VMP1-202ENST00000585847 RMI2Q96E14 147 aa8.56□□□□□ -1.04
VMP1-202ENST00000585847 HIGD1BQ9P298 99 aa8.56□□□□□ -1.04
VMP1-202ENST00000585847 TRAV8-3A0A0A6YYJ7 113 aa8.55□□□□□ -1.04
VMP1-202ENST00000585847 IGHV3OR16-9A0A0B4J2B5 98 aa8.55□□□□□ -1.04
VMP1-202ENST00000585847 J3QQQ9 107 aa8.55□□□□□ -1.04
VMP1-202ENST00000585847 HNRNPA3P51991 378 aaKnown RBP8.55□□□□□ -1.04
VMP1-202ENST00000585847 MAJINQ3KP22 176 aa8.55□□□□□ -1.04
VMP1-202ENST00000585847 RNASE13Q5GAN3 156 aaKnown RBP8.55□□□□□ -1.04
VMP1-202ENST00000585847 WFDC10BQ8IUB3 73 aa8.55□□□□□ -1.04
VMP1-202ENST00000585847 UBE2DNLQ8IWF7 75 aa8.55□□□□□ -1.04
VMP1-202ENST00000585847 LINC00269Q8N2A0 174 aa8.55□□□□□ -1.04
VMP1-202ENST00000585847 CDKN2A-AS1Q9UH64 79 aa8.55□□□□□ -1.04
VMP1-202ENST00000585847 COX11Q9Y6N1 276 aa8.55□□□□□ -1.04
VMP1-202ENST00000585847 APOMO95445 188 aa8.54□□□□□ -1.04
VMP1-202ENST00000585847 TTC32Q5I0X7 151 aa8.54□□□□□ -1.04
VMP1-202ENST00000585847 MYMXA0A1B0GTQ4 84 aa8.53□□□□□ -1.04
VMP1-202ENST00000585847 LINC00587B1AMM8 73 aa8.53□□□□□ -1.04
VMP1-202ENST00000585847 COX7A2LO14548 114 aa8.53□□□□□ -1.04
VMP1-202ENST00000585847 IGHV3-30-3P0DP02 117 aa8.53□□□□□ -1.04
VMP1-202ENST00000585847 CXCL5P42830 114 aa8.53□□□□□ -1.04
VMP1-202ENST00000585847 HERV-K104P63124 156 aa8.53□□□□□ -1.04
VMP1-202ENST00000585847 KRTAP1-5Q9BYS1 174 aa8.53□□□□□ -1.04
VMP1-202ENST00000585847 PRO1933Q9H354 126 aa8.53□□□□□ -1.04
VMP1-202ENST00000585847 Q9H8V8 135 aa8.53□□□□□ -1.04
VMP1-202ENST00000585847 HERC2O95714 4834 aa8.53□□□□□ -1.04
VMP1-202ENST00000585847 SMIM1B2RUZ4 78 aa8.52□□□□□ -1.05
VMP1-202ENST00000585847 M0R143 59 aa8.52□□□□□ -1.05
VMP1-202ENST00000585847 Q8N3U1 123 aa8.52□□□□□ -1.05
VMP1-202ENST00000585847 CHCHD10Q8WYQ3 142 aaPredicted RBP8.52□□□□□ -1.05
VMP1-202ENST00000585847 C14orf144Q96I85 54 aa8.52□□□□□ -1.05
VMP1-202ENST00000585847 KLK12Q9UKR0 248 aa8.52□□□□□ -1.05
VMP1-202ENST00000585847 IGKV2D-26A0A0A0MRZ7 120 aa8.51□□□□□ -1.05
VMP1-202ENST00000585847 ZNF815PA8K554 130 aa8.51□□□□□ -1.05
VMP1-202ENST00000585847 F8WDY8 70 aa8.51□□□□□ -1.05
VMP1-202ENST00000585847 TAL2Q16559 108 aa8.51□□□□□ -1.05
VMP1-202ENST00000585847 Q6ZR54 194 aa8.51□□□□□ -1.05
VMP1-202ENST00000585847 Q6ZVH6 145 aa8.51□□□□□ -1.05
VMP1-202ENST00000585847 COPS9Q8WXC6 57 aa8.51□□□□□ -1.05
VMP1-202ENST00000585847 C1orf43Q9BWL3 253 aa8.51□□□□□ -1.05
VMP1-202ENST00000585847 IBA57-AS1B1ANH7 110 aa8.5□□□□□ -1.05
VMP1-202ENST00000585847 NDUFA1O15239 70 aa8.5□□□□□ -1.05
VMP1-202ENST00000585847 XCL1P47992 114 aa8.5□□□□□ -1.05
VMP1-202ENST00000585847 Q8IZM0 81 aa8.5□□□□□ -1.05
VMP1-202ENST00000585847 UBE2WQ96B02 151 aa8.5□□□□□ -1.05
VMP1-202ENST00000585847 DNAH2Q9P225 4427 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 IGKV3OR2-268A0A0C4DH90 116 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 TIMM17BO60830 172 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 IGHV3-30P01768 117 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 IGHV3-33P01772 117 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 IGHV3-30-5P0DP03 117 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 MALP21145 153 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 HSD52Q0P140 79 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 LBHQ53QV2 105 aaPredicted RBP8.49□□□□□ -1.05
VMP1-202ENST00000585847 ENHOQ6UWT2 76 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 SCGB1D4Q6XE38 83 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 PCP2Q8IVA1 136 aa8.49□□□□□ -1.05
VMP1-202ENST00000585847 A0A0J9YXY3 114 aa8.48□□□□□ -1.05
VMP1-202ENST00000585847 NBDYA0A0U1RRE5 68 aa8.48□□□□□ -1.05
VMP1-202ENST00000585847 PCP4L1A6NKN8 68 aa8.48□□□□□ -1.05
VMP1-202ENST00000585847 M0R2N4 97 aa8.48□□□□□ -1.05
VMP1-202ENST00000585847 PRSS2P07478 247 aa8.48□□□□□ -1.05
VMP1-202ENST00000585847 SPINK8P0C7L1 97 aa8.48□□□□□ -1.05
VMP1-202ENST00000585847 COX6A2Q02221 97 aa8.48□□□□□ -1.05
VMP1-202ENST00000585847 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms