RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 CFC1BP0CG36 223 aa8.88□□□□□ -0.99
SMARCA4-208ENST00000585799 CFC1P0CG37 223 aa8.88□□□□□ -0.99
SMARCA4-208ENST00000585799 A0A1B0GV72 72 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 RETNQ9HD89 108 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 NBPF19A0A087WUL8 3843 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 TRBV6-8A0A0A6YYG3 113 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 TEX48A0A1B0GUV7 120 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 TRBV6-4A0A1B0GX49 114 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 IGHV3-30P01768 117 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 IGHV3-33P01772 117 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 CRPP02741 224 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 IGHV3-30-5P0DP03 117 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 C10orf126Q8N4M7 172 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 PTH2Q96A98 100 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 VPS13CQ709C8 3753 aa8.87□□□□□ -0.99
SMARCA4-208ENST00000585799 TSPAN13O95857 204 aa8.86□□□□□ -0.99
SMARCA4-208ENST00000585799 IGHV4-30-4P0DP06 118 aa8.86□□□□□ -0.99
SMARCA4-208ENST00000585799 NTM-AS1Q6ZSK4 140 aa8.86□□□□□ -0.99
SMARCA4-208ENST00000585799 IGLV4-60A0A075B6I1 120 aa8.85□□□□□ -0.99
SMARCA4-208ENST00000585799 UBE2D1P51668 147 aa8.85□□□□□ -0.99
SMARCA4-208ENST00000585799 MRPS36P82909 103 aaKnown RBP8.85□□□□□ -0.99
SMARCA4-208ENST00000585799 FHL2Q14192 279 aa8.85□□□□□ -0.99
SMARCA4-208ENST00000585799 PIK3CD-AS1Q5SR53 167 aa8.85□□□□□ -0.99
SMARCA4-208ENST00000585799 LINC00242Q5T6M2 205 aa8.85□□□□□ -0.99
SMARCA4-208ENST00000585799 UBE2WQ96B02 151 aa8.85□□□□□ -0.99
SMARCA4-208ENST00000585799 GIG44P09565 113 aaPredicted RBP8.85□□□□□ -0.99
SMARCA4-208ENST00000585799 KLK12Q9UKR0 248 aa8.84□□□□□ -0.99
SMARCA4-208ENST00000585799 LINC00269Q8N2A0 174 aa8.84□□□□□ -0.99
SMARCA4-208ENST00000585799 COPS9Q8WXC6 57 aa8.84□□□□□ -0.99
SMARCA4-208ENST00000585799 AMELXQ99217 191 aa8.84□□□□□ -0.99
SMARCA4-208ENST00000585799 NBEAL1Q6ZS30 2694 aa8.83□□□□□ -1
SMARCA4-208ENST00000585799 CDC42SE2Q9NRR3 84 aa8.83□□□□□ -1
SMARCA4-208ENST00000585799 COX7B2Q8TF08 81 aa8.83□□□□□ -1
SMARCA4-208ENST00000585799 A8MTW9 85 aa8.83□□□□□ -1
SMARCA4-208ENST00000585799 RBX1P62877 108 aa8.83□□□□□ -1
SMARCA4-208ENST00000585799 MRPL23Q16540 153 aaKnown RBP8.82□□□□□ -1
SMARCA4-208ENST00000585799 GTSF1LQ9H1H1 148 aa8.82□□□□□ -1
SMARCA4-208ENST00000585799 C19orf73Q9NVV2 129 aa8.82□□□□□ -1
SMARCA4-208ENST00000585799 MIR7-3HGQ8N6C7 128 aa8.82□□□□□ -1
SMARCA4-208ENST00000585799 LINC00526Q96FQ7 95 aa8.82□□□□□ -1
SMARCA4-208ENST00000585799 ADAMTSL4-AS1Q5T5F5 129 aa8.81□□□□□ -1
SMARCA4-208ENST00000585799 C2orf82Q6UX34 121 aa8.81□□□□□ -1
SMARCA4-208ENST00000585799 CLUHP3Q96NS8 147 aa8.81□□□□□ -1
SMARCA4-208ENST00000585799 CLEC2BQ92478 149 aa8.81□□□□□ -1
SMARCA4-208ENST00000585799 SMIM9A6NGZ8 99 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 F8W1H4 67 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 TCL1BO95988 128 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 DNAL4O96015 105 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 ICOSQ9Y6W8 199 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 TIRAPP58753 221 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 ATXN8Q156A1 80 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 Q9HAA7 133 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 LYRM9A8MSI8 78 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 CRYBA4P53673 196 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 MIAQ16674 131 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 UFSP1Q6NVU6 142 aa8.8□□□□□ -1
SMARCA4-208ENST00000585799 CELA1Q9UNI1 258 aa8.79□□□□□ -1
SMARCA4-208ENST00000585799 SLC25A20O43772 301 aa8.79□□□□□ -1
SMARCA4-208ENST00000585799 ZFAND6Q6FIF0 208 aa8.79□□□□□ -1
SMARCA4-208ENST00000585799 TRBV20-1A0A075B6N2 111 aa8.78□□□□□ -1
SMARCA4-208ENST00000585799 OVOL2Q9BRP0 275 aa8.78□□□□□ -1
SMARCA4-208ENST00000585799 SPANXB1Q9NS25 103 aaPredicted RBP8.78□□□□□ -1
SMARCA4-208ENST00000585799 SND1-IT1Q9HBX3 110 aa8.78□□□□□ -1
SMARCA4-208ENST00000585799 X6R8D5 127 aa8.78□□□□□ -1
SMARCA4-208ENST00000585799 SMIM1B2RUZ4 78 aa8.77□□□□□ -1
SMARCA4-208ENST00000585799 NTN5Q8WTR8 489 aaPredicted RBP8.77□□□□□ -1.01
SMARCA4-208ENST00000585799 COX7A2LO14548 114 aa8.77□□□□□ -1.01
SMARCA4-208ENST00000585799 CSNK1G2-AS1Q8NCQ2 148 aa8.77□□□□□ -1.01
SMARCA4-208ENST00000585799 MIFP14174 115 aa8.76□□□□□ -1.01
SMARCA4-208ENST00000585799 CYSRT1A8MQ03 144 aa8.76□□□□□ -1.01
SMARCA4-208ENST00000585799 REG3AQ06141 175 aa8.76□□□□□ -1.01
SMARCA4-208ENST00000585799 KRTAP24-1Q3LI83 254 aa8.76□□□□□ -1.01
SMARCA4-208ENST00000585799 Q8N3U1 123 aa8.76□□□□□ -1.01
SMARCA4-208ENST00000585799 LINC00959A0A1B0GUT2 108 aa8.76□□□□□ -1.01
SMARCA4-208ENST00000585799 KIR2DL5BQ8NHK3 375 aa8.76□□□□□ -1.01
SMARCA4-208ENST00000585799 LINC00308Q8TCZ7 52 aa8.76□□□□□ -1.01
SMARCA4-208ENST00000585799 NDUFA1O15239 70 aa8.75□□□□□ -1.01
SMARCA4-208ENST00000585799 PLAC8L1A1L4L8 177 aa8.75□□□□□ -1.01
SMARCA4-208ENST00000585799 IFITM1P13164 125 aa8.75□□□□□ -1.01
SMARCA4-208ENST00000585799 HERV-K104P63124 156 aa8.75□□□□□ -1.01
SMARCA4-208ENST00000585799 S100A7L2Q5SY68 101 aa8.75□□□□□ -1.01
SMARCA4-208ENST00000585799 CHCHD10Q8WYQ3 142 aaPredicted RBP8.75□□□□□ -1.01
SMARCA4-208ENST00000585799 OTOGQ6ZRI0 2925 aa8.74□□□□□ -1.01
SMARCA4-208ENST00000585799 IGKV2D-24A0A075B6R9 120 aa8.74□□□□□ -1.01
SMARCA4-208ENST00000585799 TRIAP1O43715 76 aa8.74□□□□□ -1.01
SMARCA4-208ENST00000585799 CARD19Q96LW7 228 aa8.74□□□□□ -1.01
SMARCA4-208ENST00000585799 GAGE12HA6NDE8 117 aa8.73□□□□□ -1.01
SMARCA4-208ENST00000585799 LINC01620Q4KN68 170 aa8.73□□□□□ -1.01
SMARCA4-208ENST00000585799 CITED1Q99966 193 aa8.73□□□□□ -1.01
SMARCA4-208ENST00000585799 PDZD2O15018 2839 aa8.73□□□□□ -1.01
SMARCA4-208ENST00000585799 ZNF561-AS1K7EIQ3 104 aa8.73□□□□□ -1.01
SMARCA4-208ENST00000585799 ZFHX3Q15911 3703 aa8.73□□□□□ -1.01
SMARCA4-208ENST00000585799 EDA2RQ9HAV5 297 aa8.73□□□□□ -1.01
SMARCA4-208ENST00000585799 SNCGO76070 127 aa8.72□□□□□ -1.01
SMARCA4-208ENST00000585799 NANOS2P60321 138 aaKnown RBP8.72□□□□□ -1.01
SMARCA4-208ENST00000585799 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
SMARCA4-208ENST00000585799 HIGD2BQ4VC39 106 aa8.72□□□□□ -1.01
SMARCA4-208ENST00000585799 A0A0B4J2C4 111 aa8.72□□□□□ -1.01
SMARCA4-208ENST00000585799 G3V4G9 280 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms