RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 EIF4EBP3O60516 100 aaPredicted RBP7.27□□□□□ -1.25
RFFL-212ENST00000584655 LINC00158P58513 81 aa7.27□□□□□ -1.25
RFFL-212ENST00000584655 BEAN1Q3B7T3 259 aa7.27□□□□□ -1.25
RFFL-212ENST00000584655 Q6ZTC4 211 aa7.27□□□□□ -1.25
RFFL-212ENST00000584655 A0A0J9YWU9 116 aa7.26□□□□□ -1.25
RFFL-212ENST00000584655 ODF3Q96PU9 254 aa7.26□□□□□ -1.25
RFFL-212ENST00000584655 TRBV7-9A0A0J9YWB2 115 aa7.26□□□□□ -1.25
RFFL-212ENST00000584655 PIK3CD-AS1Q5SR53 167 aa7.26□□□□□ -1.25
RFFL-212ENST00000584655 SIVA1O15304 175 aa7.26□□□□□ -1.25
RFFL-212ENST00000584655 RS1O15537 224 aa7.26□□□□□ -1.25
RFFL-212ENST00000584655 MUSTN1Q8IVN3 82 aa7.26□□□□□ -1.25
RFFL-212ENST00000584655 UBE2D4Q9Y2X8 147 aa7.26□□□□□ -1.25
RFFL-212ENST00000584655 A4D1N5 150 aa7.25□□□□□ -1.25
RFFL-212ENST00000584655 MED14OSP0DP75 135 aa7.25□□□□□ -1.25
RFFL-212ENST00000584655 FHL2Q14192 279 aa7.25□□□□□ -1.25
RFFL-212ENST00000584655 MDFIQ99750 246 aa7.25□□□□□ -1.25
RFFL-212ENST00000584655 SPANXB1Q9NS25 103 aaPredicted RBP7.25□□□□□ -1.25
RFFL-212ENST00000584655 F8W1H4 67 aa7.25□□□□□ -1.25
RFFL-212ENST00000584655 MT-ATP8P03928 68 aa7.25□□□□□ -1.25
RFFL-212ENST00000584655 C9orf116Q5BN46 136 aaPredicted RBP7.25□□□□□ -1.25
RFFL-212ENST00000584655 PAPPA-AS1Q5QFB9 102 aa7.25□□□□□ -1.25
RFFL-212ENST00000584655 RHOHQ15669 191 aa7.25□□□□□ -1.25
RFFL-212ENST00000584655 X6R8D5 127 aa7.25□□□□□ -1.25
RFFL-212ENST00000584655 TRAV4A0A0B4J268 109 aa7.24□□□□□ -1.25
RFFL-212ENST00000584655 PLAC8L1A1L4L8 177 aa7.24□□□□□ -1.25
RFFL-212ENST00000584655 ANAPC13Q9BS18 74 aa7.24□□□□□ -1.25
RFFL-212ENST00000584655 APOC4P55056 127 aa7.24□□□□□ -1.25
RFFL-212ENST00000584655 C6orf226Q5I0X4 101 aa7.24□□□□□ -1.25
RFFL-212ENST00000584655 HIGD2BQ4VC39 106 aa7.24□□□□□ -1.25
RFFL-212ENST00000584655 ADAMTSL4-AS1Q5T5F5 129 aa7.24□□□□□ -1.25
RFFL-212ENST00000584655 CITED1Q99966 193 aa7.24□□□□□ -1.25
RFFL-212ENST00000584655 MALP21145 153 aa7.23□□□□□ -1.25
RFFL-212ENST00000584655 E9PLD3 99 aa7.23□□□□□ -1.25
RFFL-212ENST00000584655 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
RFFL-212ENST00000584655 NFE4Q86UQ8 179 aa7.23□□□□□ -1.25
RFFL-212ENST00000584655 CSNK1G2-AS1Q8NCQ2 148 aa7.23□□□□□ -1.25
RFFL-212ENST00000584655 SS18L2Q9UHA2 77 aa7.23□□□□□ -1.25
RFFL-212ENST00000584655 LYRM7Q5U5X0 104 aa7.22□□□□□ -1.25
RFFL-212ENST00000584655 C10orf126Q8N4M7 172 aa7.22□□□□□ -1.25
RFFL-212ENST00000584655 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
RFFL-212ENST00000584655 ERG28Q9UKR5 140 aa7.22□□□□□ -1.25
RFFL-212ENST00000584655 TRAV12-1A0A0B4J245 112 aa7.22□□□□□ -1.25
RFFL-212ENST00000584655 ATP5G1P05496 136 aa7.22□□□□□ -1.25
RFFL-212ENST00000584655 SPART-AS1P0CW21 52 aa7.22□□□□□ -1.25
RFFL-212ENST00000584655 SBSPONQ8IVN8 264 aa7.22□□□□□ -1.25
RFFL-212ENST00000584655 TIMM17AQ99595 171 aa7.22□□□□□ -1.25
RFFL-212ENST00000584655 SNCGO76070 127 aa7.21□□□□□ -1.25
RFFL-212ENST00000584655 TSPAN13O95857 204 aa7.21□□□□□ -1.25
RFFL-212ENST00000584655 TTC32Q5I0X7 151 aa7.21□□□□□ -1.25
RFFL-212ENST00000584655 ZFAND6Q6FIF0 208 aa7.21□□□□□ -1.25
RFFL-212ENST00000584655 PRO0255Q9UI72 69 aa7.21□□□□□ -1.25
RFFL-212ENST00000584655 UBE2D3P61077 147 aa7.21□□□□□ -1.26
RFFL-212ENST00000584655 UBE2D2P62837 147 aa7.21□□□□□ -1.26
RFFL-212ENST00000584655 LINC00242Q5T6M2 205 aa7.21□□□□□ -1.26
RFFL-212ENST00000584655 ZMAT4Q9H898 229 aa7.21□□□□□ -1.26
RFFL-212ENST00000584655 TRBV6-8A0A0A6YYG3 113 aa7.21□□□□□ -1.26
RFFL-212ENST00000584655 B5MCH6 92 aa7.21□□□□□ -1.26
RFFL-212ENST00000584655 TCL1BO95988 128 aa7.21□□□□□ -1.26
RFFL-212ENST00000584655 FOXI1Q12951 378 aa7.21□□□□□ -1.26
RFFL-212ENST00000584655 TRBV6-5A0A0K0K1A5 114 aa7.2□□□□□ -1.26
RFFL-212ENST00000584655 TM2D2Q9BX73 214 aa7.2□□□□□ -1.26
RFFL-212ENST00000584655 HIGD1BQ9P298 99 aa7.2□□□□□ -1.26
RFFL-212ENST00000584655 CRYBA4P53673 196 aa7.2□□□□□ -1.26
RFFL-212ENST00000584655 ANKRD29Q8N6D5 301 aa7.2□□□□□ -1.26
RFFL-212ENST00000584655 C6orf223Q8N319 242 aa7.19□□□□□ -1.26
RFFL-212ENST00000584655 A0A0J9YXY3 114 aa7.19□□□□□ -1.26
RFFL-212ENST00000584655 TMEM223A0PJW6 202 aa7.19□□□□□ -1.26
RFFL-212ENST00000584655 SLC25A20O43772 301 aa7.19□□□□□ -1.26
RFFL-212ENST00000584655 PRO1854Q9UHT4 67 aa7.19□□□□□ -1.26
RFFL-212ENST00000584655 WFDC10BQ8IUB3 73 aa7.18□□□□□ -1.26
RFFL-212ENST00000584655 CLEC2BQ92478 149 aa7.18□□□□□ -1.26
RFFL-212ENST00000584655 XGP55808 180 aa7.18□□□□□ -1.26
RFFL-212ENST00000584655 CMC4P56277 68 aaPredicted RBP7.18□□□□□ -1.26
RFFL-212ENST00000584655 RNF183Q96D59 192 aa7.18□□□□□ -1.26
RFFL-212ENST00000584655 ANK2Q01484 3957 aa7.18□□□□□ -1.26
RFFL-212ENST00000584655 IGKV2D-24A0A075B6R9 120 aa7.17□□□□□ -1.26
RFFL-212ENST00000584655 GAGE2BQ13066 116 aa7.17□□□□□ -1.26
RFFL-212ENST00000584655 GAGE2EQ4V326 116 aa7.17□□□□□ -1.26
RFFL-212ENST00000584655 SHISA2Q6UWI4 295 aa7.17□□□□□ -1.26
RFFL-212ENST00000584655 XAGE1AQ9HD64 81 aa7.17□□□□□ -1.26
RFFL-212ENST00000584655 GAGE2DQ9UEU5 116 aa7.17□□□□□ -1.26
RFFL-212ENST00000584655 CDC42SE2Q9NRR3 84 aa7.17□□□□□ -1.26
RFFL-212ENST00000584655 DEFB131BA0A096LNP1 70 aa7.17□□□□□ -1.26
RFFL-212ENST00000584655 FUSP35637 526 aaKnown RBP eCLIP7.17□□□□□ -1.26
RFFL-212ENST00000584655 KPRPQ5T749 579 aaPredicted RBP7.17□□□□□ -1.26
RFFL-212ENST00000584655 MIR7-3HGQ8N6C7 128 aa7.17□□□□□ -1.26
RFFL-212ENST00000584655 PPDPFLQ8WWR9 84 aa7.17□□□□□ -1.26
RFFL-212ENST00000584655 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
RFFL-212ENST00000584655 C11orf45Q8TAV5 145 aa7.16□□□□□ -1.26
RFFL-212ENST00000584655 UBE2D1P51668 147 aa7.16□□□□□ -1.26
RFFL-212ENST00000584655 SPANXA1Q9NS26 97 aa7.16□□□□□ -1.26
RFFL-212ENST00000584655 TEX49A0A1B0GTD5 131 aa7.16□□□□□ -1.26
RFFL-212ENST00000584655 CRPP02741 224 aa7.16□□□□□ -1.26
RFFL-212ENST00000584655 RPL13AP40429 203 aaKnown RBP7.16□□□□□ -1.26
RFFL-212ENST00000584655 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.26
RFFL-212ENST00000584655 CIRBPQ14011 172 aaKnown RBP7.15□□□□□ -1.26
RFFL-212ENST00000584655 COX6CP09669 75 aa7.15□□□□□ -1.26
RFFL-212ENST00000584655 CFC1BP0CG36 223 aa7.15□□□□□ -1.26
RFFL-212ENST00000584655 CFC1P0CG37 223 aa7.15□□□□□ -1.26
RFFL-212ENST00000584655 OVOL2Q9BRP0 275 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms