RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 NUDT15Q9NV35 164 aa3.47□□□□□ -1.85
NUP85-221ENST00000583548 USH2AO75445 5202 aa3.47□□□□□ -1.85
NUP85-221ENST00000583548 IGHV3OR16-9A0A0B4J2B5 98 aa3.46□□□□□ -1.86
NUP85-221ENST00000583548 CTXND1A0A1B0GTU2 59 aa3.46□□□□□ -1.86
NUP85-221ENST00000583548 ZNF727A8MUV8 499 aa3.46□□□□□ -1.86
NUP85-221ENST00000583548 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
NUP85-221ENST00000583548 PPP1R1CQ8WVI7 109 aa3.46□□□□□ -1.86
NUP85-221ENST00000583548 RPL39LQ96EH5 51 aaKnown RBP3.46□□□□□ -1.86
NUP85-221ENST00000583548 MARVELD1Q9BSK0 173 aa3.46□□□□□ -1.86
NUP85-221ENST00000583548 GNB1LQ9BYB4 327 aa3.46□□□□□ -1.86
NUP85-221ENST00000583548 TRBV6-5A0A0K0K1A5 114 aa3.45□□□□□ -1.86
NUP85-221ENST00000583548 LYRM1O43325 122 aa3.45□□□□□ -1.86
NUP85-221ENST00000583548 SLC25A20O43772 301 aa3.45□□□□□ -1.86
NUP85-221ENST00000583548 UPK1BO75841 260 aa3.45□□□□□ -1.86
NUP85-221ENST00000583548 MPC2O95563 127 aa3.45□□□□□ -1.86
NUP85-221ENST00000583548 IFNA1P01562 189 aa3.45□□□□□ -1.86
NUP85-221ENST00000583548 H2AFB2P0C5Z0 115 aa3.45□□□□□ -1.86
NUP85-221ENST00000583548 FOXA3P55318 350 aaPredicted RBP3.45□□□□□ -1.86
NUP85-221ENST00000583548 CST9LP1Q5W188 147 aa3.45□□□□□ -1.86
NUP85-221ENST00000583548 KRTAP9-8Q9BYQ0 159 aa3.45□□□□□ -1.86
NUP85-221ENST00000583548 TMEM242Q9NWH2 141 aa3.45□□□□□ -1.86
NUP85-221ENST00000583548 TGIF2-C20orf24A0A0A6YYL0 155 aa3.44□□□□□ -1.86
NUP85-221ENST00000583548 RPL37AP8A6NKH3 93 aa3.44□□□□□ -1.86
NUP85-221ENST00000583548 INMT-MINDY4F8WBC2 141 aa3.44□□□□□ -1.86
NUP85-221ENST00000583548 SIX6O95475 246 aa3.44□□□□□ -1.86
NUP85-221ENST00000583548 KIAA0087Q14695 138 aa3.44□□□□□ -1.86
NUP85-221ENST00000583548 TWIST1Q15672 202 aa3.44□□□□□ -1.86
NUP85-221ENST00000583548 Q8NBF4 154 aa3.44□□□□□ -1.86
NUP85-221ENST00000583548 TMEM18Q96B42 140 aa3.44□□□□□ -1.86
NUP85-221ENST00000583548 LINC00167Q96N53 147 aa3.44□□□□□ -1.86
NUP85-221ENST00000583548 TIMM21Q9BVV7 248 aa3.44□□□□□ -1.86
NUP85-221ENST00000583548 ST20Q9HBF5 79 aa3.44□□□□□ -1.86
NUP85-221ENST00000583548 TRBV27A0A0K0K1C4 114 aa3.43□□□□□ -1.86
NUP85-221ENST00000583548 PFDN1O60925 122 aa3.43□□□□□ -1.86
NUP85-221ENST00000583548 IL7P13232 177 aa3.43□□□□□ -1.86
NUP85-221ENST00000583548 FCER1GP30273 86 aa3.43□□□□□ -1.86
NUP85-221ENST00000583548 PNRC1Q12796 327 aaPredicted RBP3.43□□□□□ -1.86
NUP85-221ENST00000583548 RNASE13Q5GAN3 156 aaKnown RBP3.43□□□□□ -1.86
NUP85-221ENST00000583548 Q8N377 158 aa3.43□□□□□ -1.86
NUP85-221ENST00000583548 C9orf62Q8N4C0 152 aa3.43□□□□□ -1.86
NUP85-221ENST00000583548 PLEKHB2Q96CS7 222 aa3.43□□□□□ -1.86
NUP85-221ENST00000583548 CNFNQ9BYD5 112 aa3.43□□□□□ -1.86
NUP85-221ENST00000583548 XAGE1AQ9HD64 81 aa3.43□□□□□ -1.86
NUP85-221ENST00000583548 ZNF706Q9Y5V0 76 aaPredicted RBP3.43□□□□□ -1.86
NUP85-221ENST00000583548 H2AFB1P0C5Y9 115 aa3.42□□□□□ -1.86
NUP85-221ENST00000583548 ZNF726P1Q15940 193 aa3.42□□□□□ -1.86
NUP85-221ENST00000583548 C2orf82Q6UX34 121 aa3.42□□□□□ -1.86
NUP85-221ENST00000583548 Q6ZUT4 128 aa3.42□□□□□ -1.86
NUP85-221ENST00000583548 LINC00469Q8N7U9 141 aa3.42□□□□□ -1.86
NUP85-221ENST00000583548 GEMIN7Q9H840 131 aaKnown RBP3.42□□□□□ -1.86
NUP85-221ENST00000583548 MAP1LC3B2A6NCE7 125 aa3.41□□□□□ -1.86
NUP85-221ENST00000583548 PLA2G10O15496 165 aa3.41□□□□□ -1.86
NUP85-221ENST00000583548 PRSS2P07478 247 aa3.41□□□□□ -1.86
NUP85-221ENST00000583548 POLR2KP53803 58 aaKnown RBP3.41□□□□□ -1.86
NUP85-221ENST00000583548 CKS1BP61024 79 aa3.41□□□□□ -1.86
NUP85-221ENST00000583548 RPL32P62910 135 aaKnown RBP3.41□□□□□ -1.86
NUP85-221ENST00000583548 PRLHP81277 87 aa3.41□□□□□ -1.86
NUP85-221ENST00000583548 TMUB2Q71RG4 321 aa3.41□□□□□ -1.86
NUP85-221ENST00000583548 FAM19A1Q7Z5A9 133 aa3.41□□□□□ -1.86
NUP85-221ENST00000583548 CBLN2Q8IUK8 224 aa3.41□□□□□ -1.86
NUP85-221ENST00000583548 NKAPP1Q8N9T2 125 aa3.41□□□□□ -1.86
NUP85-221ENST00000583548 SMIM12Q96EX1 92 aa3.41□□□□□ -1.86
NUP85-221ENST00000583548 MAP1LC3BQ9GZQ8 125 aa3.41□□□□□ -1.86
NUP85-221ENST00000583548 RNASE7Q9H1E1 156 aaKnown RBP3.41□□□□□ -1.86
NUP85-221ENST00000583548 IGLV5-37A0A075B6J1 123 aa3.4□□□□□ -1.87
NUP85-221ENST00000583548 FAM240BA0A1B0GVZ2 78 aa3.4□□□□□ -1.87
NUP85-221ENST00000583548 GAGE10A6NGK3 116 aa3.4□□□□□ -1.87
NUP85-221ENST00000583548 VCYO14598 125 aa3.4□□□□□ -1.87
NUP85-221ENST00000583548 PAGE4O60829 102 aa3.4□□□□□ -1.87
NUP85-221ENST00000583548 H2BFSP57053 126 aa3.4□□□□□ -1.87
NUP85-221ENST00000583548 DEFA1P59665 94 aa3.4□□□□□ -1.87
NUP85-221ENST00000583548 AKR1C8PQ5T2L2 129 aa3.4□□□□□ -1.87
NUP85-221ENST00000583548 LINC01551Q86U37 167 aa3.4□□□□□ -1.87
NUP85-221ENST00000583548 LINC01561Q8N1V8 128 aa3.4□□□□□ -1.87
NUP85-221ENST00000583548 BIN3Q9NQY0 253 aa3.4□□□□□ -1.87
NUP85-221ENST00000583548 IFITM10A6NMD0 228 aa3.39□□□□□ -1.87
NUP85-221ENST00000583548 HBBP68871 147 aa3.39□□□□□ -1.87
NUP85-221ENST00000583548 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
NUP85-221ENST00000583548 C6orf226Q5I0X4 101 aa3.39□□□□□ -1.87
NUP85-221ENST00000583548 SPRR4Q96PI1 79 aa3.39□□□□□ -1.87
NUP85-221ENST00000583548 IGKV2-28A0A075B6P5 120 aa3.38□□□□□ -1.87
NUP85-221ENST00000583548 BORCS7-ASMTA0A0B4J1R7 106 aa3.38□□□□□ -1.87
NUP85-221ENST00000583548 TCAPO15273 167 aa3.38□□□□□ -1.87
NUP85-221ENST00000583548 PPP1R17O96001 155 aa3.38□□□□□ -1.87
NUP85-221ENST00000583548 IGKV2D-28P01615 120 aa3.38□□□□□ -1.87
NUP85-221ENST00000583548 RPL35P42766 123 aaKnown RBP3.38□□□□□ -1.87
NUP85-221ENST00000583548 MRPS36P82909 103 aaKnown RBP3.38□□□□□ -1.87
NUP85-221ENST00000583548 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
NUP85-221ENST00000583548 HIGD2AQ9BW72 106 aa3.38□□□□□ -1.87
NUP85-221ENST00000583548 TMEM126AQ9H061 195 aa3.38□□□□□ -1.87
NUP85-221ENST00000583548 SPANXA1Q9NS26 97 aa3.38□□□□□ -1.87
NUP85-221ENST00000583548 NEBP20929 6669 aa3.37□□□□□ -1.87
NUP85-221ENST00000583548 A6NJY4 79 aa3.37□□□□□ -1.87
NUP85-221ENST00000583548 F8VRH5 84 aa3.37□□□□□ -1.87
NUP85-221ENST00000583548 SSBP3-AS1Q7Z2R9 100 aa3.37□□□□□ -1.87
NUP85-221ENST00000583548 Q8IZM0 81 aa3.37□□□□□ -1.87
NUP85-221ENST00000583548 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
NUP85-221ENST00000583548 PPP1R2P9O14990 202 aa3.36□□□□□ -1.87
NUP85-221ENST00000583548 CXCL5P42830 114 aa3.36□□□□□ -1.87
NUP85-221ENST00000583548 GNG4P50150 75 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms