RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 TRAV1-1A0A0B4J248 108 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 A0A0J9YX75 114 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 ZNF705FA8MVS1 300 aaPredicted RBP1.3□□□□□ -2.2
VAPA-206ENST00000583475 H3BMM0 161 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 LST1O00453 97 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 UBE2L6O14933 153 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 GNG7O60262 68 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 IFNA4P05014 189 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 NMBP08949 121 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 ZNF705BP0CI00 300 aaPredicted RBP1.3□□□□□ -2.2
VAPA-206ENST00000583475 ARL14EPLP0DKL9 152 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 HLA-DRB4P13762 266 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 ADCYAP1P18509 176 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 FGF7P21781 194 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 S100A11P31949 105 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 SNCAP37840 140 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 CRIP1P50238 77 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 INSL3P51460 131 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 CKS1BP61024 79 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 ERHP84090 104 aaKnown RBP1.3□□□□□ -2.2
VAPA-206ENST00000583475 Q56UQ5 140 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 ZNF705AQ6ZN79 300 aaPredicted RBP1.3□□□□□ -2.2
VAPA-206ENST00000583475 LINC00305Q7Z4B0 112 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 AMN1Q8IY45 258 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 EXOC3-AS1Q8N2X6 119 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 OR10P1Q8NGE3 313 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 PLEKHB2Q96CS7 222 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 B9D2Q9BPU9 175 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 VPS25Q9BRG1 176 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 DERL1Q9BUN8 251 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 SLC35B3Q9H1N7 401 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 C11orf68Q9H3H3 251 aaKnown RBP1.3□□□□□ -2.2
VAPA-206ENST00000583475 NPVFQ9HCQ7 196 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 CACFD1Q9UGQ2 172 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 FUT9Q9Y231 359 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 PHLDA3Q9Y5J5 127 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 TRAPPC1Q9Y5R8 145 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 HLA-DRB4X5D2U9 266 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 TRAV30A0A087WSZ9 112 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 IGKV2-40A0A087WW87 121 aaPredicted RBP1.29□□□□□ -2.2
VAPA-206ENST00000583475 TRAV4A0A0B4J268 109 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 CTXND1A0A1B0GTU2 59 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 A0A1B0GW54 56 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 A8MUN3 132 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 IGLL5B9A064 214 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 HYPMO75409 117 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 IGKV2D-40P01614 121 aaPredicted RBP1.29□□□□□ -2.2
VAPA-206ENST00000583475 SRP19P09132 144 aaKnown RBP1.29□□□□□ -2.2
VAPA-206ENST00000583475 LINC00694P0DN24 101 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 GCHFRP30047 84 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 S100A7P31151 101 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 AKR1C3P42330 323 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 CSN1S1P47710 185 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 ATP5G3P48201 142 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 DEFB131AP59861 70 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 SERF2P84101 59 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 AKR1C1Q04828 323 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 PDE6HQ13956 83 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 Q6Q795 121 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 ALKAL2Q6UX46 152 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 Q86TA4 180 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 Q8TAT8 98 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 HIST1H2BAQ96A08 127 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 TOMM6Q96B49 74 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 PDCD10Q9BUL8 212 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 MRPL32Q9BYC8 188 aaKnown RBP1.29□□□□□ -2.2
VAPA-206ENST00000583475 NKX6-2Q9C056 277 aaPredicted RBP1.29□□□□□ -2.2
VAPA-206ENST00000583475 IMUPQ9GZP8 106 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 TMEM126AQ9H061 195 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 AGPAT4-IT1Q9H0P7 198 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 RABAC1Q9UI14 185 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 HIGD1AQ9Y241 93 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 CYSLTR1Q9Y271 337 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 LAMTOR2Q9Y2Q5 125 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 VPS13BQ7Z7G8 4022 aa1.29□□□□□ -2.2
VAPA-206ENST00000583475 MYCBP2O75592 4640 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 IGKV3-7A0A075B6H7 116 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 TRAV12-2A0A075B6T6 113 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 PIGBOS1A0A0B4J2F0 54 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 A0A0D9SG52 128 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 TRBV6-1A0A0K0K1D8 114 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 TMEM189A5PLL7 270 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 C19orf71A6NCJ1 209 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 A6NED7 52 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 C9JCJ5 164 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 M0R2Z0 102 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 CYB5BO43169 146 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 TCRAP04437 139 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 RNASE3P12724 160 aaKnown RBP1.28□□□□□ -2.2
VAPA-206ENST00000583475 HIST1H2BOP23527 126 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 S100A4P26447 101 aaKnown RBP1.28□□□□□ -2.2
VAPA-206ENST00000583475 HIST1H2BBP33778 126 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 HIST1H2BDP58876 126 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 HIST1H2BCP62807 126 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 HIST2H2BEQ16778 126 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 DEFB135Q30KP9 77 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 TDRG1Q3Y452 100 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 PSMG4Q5JS54 123 aa1.28□□□□□ -2.2
VAPA-206ENST00000583475 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.28□□□□□ -2.2
VAPA-206ENST00000583475 C10orf113Q5VZT2 155 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms