RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 TRGV2A0A075B6R0 118 aa9.73□□□□□ -0.85
RNF43-205ENST00000581868 FAM19A3Q7Z5A8 133 aa9.73□□□□□ -0.85
RNF43-205ENST00000581868 COPS9Q8WXC6 57 aa9.73□□□□□ -0.85
RNF43-205ENST00000581868 WFDC10AQ9H1F0 79 aa9.73□□□□□ -0.85
RNF43-205ENST00000581868 TRAV25A0A0B4J276 109 aa9.72□□□□□ -0.85
RNF43-205ENST00000581868 DEFB121Q5J5C9 76 aa9.72□□□□□ -0.85
RNF43-205ENST00000581868 Q6Q795 121 aa9.72□□□□□ -0.85
RNF43-205ENST00000581868 SHISA2Q6UWI4 295 aa9.72□□□□□ -0.85
RNF43-205ENST00000581868 TMEM243Q9BU79 118 aa9.72□□□□□ -0.85
RNF43-205ENST00000581868 PLA2G2AP14555 144 aa9.72□□□□□ -0.85
RNF43-205ENST00000581868 TOMM7Q9P0U1 55 aa9.72□□□□□ -0.85
RNF43-205ENST00000581868 CCDC179H3BU77 68 aa9.71□□□□□ -0.85
RNF43-205ENST00000581868 RPL35AP18077 110 aaKnown RBP9.71□□□□□ -0.85
RNF43-205ENST00000581868 DNAJC9-AS1A6NH13 148 aa9.7□□□□□ -0.86
RNF43-205ENST00000581868 HERV-K104P63124 156 aa9.7□□□□□ -0.86
RNF43-205ENST00000581868 SETXQ7Z333 2677 aaKnown RBP9.7□□□□□ -0.86
RNF43-205ENST00000581868 FAM240AA0A1B0GVK7 77 aa9.7□□□□□ -0.86
RNF43-205ENST00000581868 FAM218AQ96MZ4 157 aa9.69□□□□□ -0.86
RNF43-205ENST00000581868 BBC3Q96PG8 261 aaPredicted RBP9.69□□□□□ -0.86
RNF43-205ENST00000581868 CCDC168Q8NDH2 2452 aa9.69□□□□□ -0.86
RNF43-205ENST00000581868 GIG44P09565 113 aaPredicted RBP9.69□□□□□ -0.86
RNF43-205ENST00000581868 BAALC-AS2P0C853 105 aa9.69□□□□□ -0.86
RNF43-205ENST00000581868 MRPL23Q16540 153 aaKnown RBP9.69□□□□□ -0.86
RNF43-205ENST00000581868 TRGV4A0A0C4DH28 118 aa9.68□□□□□ -0.86
RNF43-205ENST00000581868 MIR7-3HGQ8N6C7 128 aa9.68□□□□□ -0.86
RNF43-205ENST00000581868 COX7B2Q8TF08 81 aa9.68□□□□□ -0.86
RNF43-205ENST00000581868 Q9HAA7 133 aa9.68□□□□□ -0.86
RNF43-205ENST00000581868 ESM1Q9NQ30 184 aa9.68□□□□□ -0.86
RNF43-205ENST00000581868 UBR5O95071 2799 aaPredicted RBP9.67□□□□□ -0.86
RNF43-205ENST00000581868 PLAC8L1A1L4L8 177 aa9.67□□□□□ -0.86
RNF43-205ENST00000581868 ITPR3Q14573 2671 aa9.67□□□□□ -0.86
RNF43-205ENST00000581868 APCP25054 2843 aa9.67□□□□□ -0.86
RNF43-205ENST00000581868 IGLV4-60A0A075B6I1 120 aa9.66□□□□□ -0.86
RNF43-205ENST00000581868 TRACP01848 142 aa9.66□□□□□ -0.86
RNF43-205ENST00000581868 LINC00158P58513 81 aa9.66□□□□□ -0.86
RNF43-205ENST00000581868 C16orf74Q96GX8 76 aa9.66□□□□□ -0.86
RNF43-205ENST00000581868 CHCHD5Q9BSY4 110 aa9.66□□□□□ -0.86
RNF43-205ENST00000581868 USP24Q9UPU5 2620 aa9.66□□□□□ -0.86
RNF43-205ENST00000581868 CRPP02741 224 aa9.66□□□□□ -0.86
RNF43-205ENST00000581868 HIST2H2BCQ6DN03 193 aa9.66□□□□□ -0.86
RNF43-205ENST00000581868 KRTAP1-3Q8IUG1 177 aa9.66□□□□□ -0.86
RNF43-205ENST00000581868 TMEM86BQ8N661 226 aa9.66□□□□□ -0.86
RNF43-205ENST00000581868 NBPF19A0A087WUL8 3843 aa9.65□□□□□ -0.86
RNF43-205ENST00000581868 LRRC75A-AS1Q8N1F1 130 aa9.65□□□□□ -0.86
RNF43-205ENST00000581868 LINC00337Q8N6G1 96 aa9.65□□□□□ -0.86
RNF43-205ENST00000581868 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
RNF43-205ENST00000581868 WFDC11Q8NEX6 87 aa9.65□□□□□ -0.87
RNF43-205ENST00000581868 TRAV13-2A0A0B4J235 113 aa9.64□□□□□ -0.87
RNF43-205ENST00000581868 TRBV6-4A0A1B0GX49 114 aa9.64□□□□□ -0.87
RNF43-205ENST00000581868 C5orf38Q86SI9 138 aa9.64□□□□□ -0.87
RNF43-205ENST00000581868 SMCR5Q8TEV8 140 aa9.64□□□□□ -0.87
RNF43-205ENST00000581868 IGKV2-28A0A075B6P5 120 aa9.63□□□□□ -0.87
RNF43-205ENST00000581868 IGKV2D-28P01615 120 aa9.63□□□□□ -0.87
RNF43-205ENST00000581868 ACYP1P07311 99 aa9.63□□□□□ -0.87
RNF43-205ENST00000581868 PFN2P35080 140 aa9.63□□□□□ -0.87
RNF43-205ENST00000581868 C22orf24Q9Y442 160 aa9.63□□□□□ -0.87
RNF43-205ENST00000581868 TRBV7-7A0A0K0K1E9 115 aa9.62□□□□□ -0.87
RNF43-205ENST00000581868 RPL28P46779 137 aaKnown RBP9.62□□□□□ -0.87
RNF43-205ENST00000581868 C11orf68Q9H3H3 251 aaKnown RBP9.62□□□□□ -0.87
RNF43-205ENST00000581868 FLNAP21333 2647 aaKnown RBP9.62□□□□□ -0.87
RNF43-205ENST00000581868 TRBV6-8A0A0A6YYG3 113 aa9.62□□□□□ -0.87
RNF43-205ENST00000581868 ZNF843Q8N446 348 aa9.61□□□□□ -0.87
RNF43-205ENST00000581868 PF4P02776 101 aa9.61□□□□□ -0.87
RNF43-205ENST00000581868 CCL18P55774 89 aa9.61□□□□□ -0.87
RNF43-205ENST00000581868 FHL2Q14192 279 aa9.61□□□□□ -0.87
RNF43-205ENST00000581868 GAGE2AQ6NT46 116 aa9.61□□□□□ -0.87
RNF43-205ENST00000581868 LINC01006Q8NI28 216 aa9.61□□□□□ -0.87
RNF43-205ENST00000581868 SMIM11BQ8TCY0 68 aa9.61□□□□□ -0.87
RNF43-205ENST00000581868 IGHV3OR16-9A0A0B4J2B5 98 aa9.6□□□□□ -0.87
RNF43-205ENST00000581868 FAM236AA0A1B0GUQ0 79 aa9.6□□□□□ -0.87
RNF43-205ENST00000581868 FAM236BA0A1B0GV22 79 aa9.6□□□□□ -0.87
RNF43-205ENST00000581868 DEFB130BP0DP73 79 aa9.6□□□□□ -0.87
RNF43-205ENST00000581868 DEFB130AP0DP74 79 aa9.6□□□□□ -0.87
RNF43-205ENST00000581868 MALP21145 153 aa9.6□□□□□ -0.87
RNF43-205ENST00000581868 A0A087WYN8 130 aa9.6□□□□□ -0.87
RNF43-205ENST00000581868 CMC4P56277 68 aaPredicted RBP9.6□□□□□ -0.87
RNF43-205ENST00000581868 CSNK1G2-AS1Q8NCQ2 148 aa9.6□□□□□ -0.87
RNF43-205ENST00000581868 OVOL2Q9BRP0 275 aa9.6□□□□□ -0.87
RNF43-205ENST00000581868 C19orf73Q9NVV2 129 aa9.6□□□□□ -0.87
RNF43-205ENST00000581868 ATP5G1P05496 136 aa9.59□□□□□ -0.87
RNF43-205ENST00000581868 FAM222AQ5U5X8 452 aa9.59□□□□□ -0.87
RNF43-205ENST00000581868 DNAL4O96015 105 aa9.59□□□□□ -0.87
RNF43-205ENST00000581868 OR13C6PQ8NH95 151 aa9.59□□□□□ -0.87
RNF43-205ENST00000581868 FAM110AQ9BQ89 295 aa9.59□□□□□ -0.87
RNF43-205ENST00000581868 PAX4O43316 350 aa9.58□□□□□ -0.88
RNF43-205ENST00000581868 IGLV1-51P01701 117 aa9.58□□□□□ -0.88
RNF43-205ENST00000581868 C3orf56Q8N813 242 aa9.58□□□□□ -0.88
RNF43-205ENST00000581868 MTORP42345 2549 aa9.58□□□□□ -0.88
RNF43-205ENST00000581868 LINC00643Q86TS7 51 aa9.58□□□□□ -0.88
RNF43-205ENST00000581868 PPDPFQ9H3Y8 114 aa9.58□□□□□ -0.88
RNF43-205ENST00000581868 ACANP16112 2415 aa9.58□□□□□ -0.88
RNF43-205ENST00000581868 FN1P02751 2386 aaKnown RBP9.57□□□□□ -0.88
RNF43-205ENST00000581868 A0A087WZ39 114 aa9.57□□□□□ -0.88
RNF43-205ENST00000581868 INAFM2P0DMQ5 153 aa9.57□□□□□ -0.88
RNF43-205ENST00000581868 C6orf226Q5I0X4 101 aa9.57□□□□□ -0.88
RNF43-205ENST00000581868 XCL1P47992 114 aa9.56□□□□□ -0.88
RNF43-205ENST00000581868 C9orf129Q5T035 196 aaKnown RBP9.56□□□□□ -0.88
RNF43-205ENST00000581868 LINC00959A0A1B0GUT2 108 aa9.56□□□□□ -0.88
RNF43-205ENST00000581868 IBA57-AS1B1ANH7 110 aa9.56□□□□□ -0.88
RNF43-205ENST00000581868 CLPSL2Q6UWE3 100 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms