RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 K7EIL1 84 aa8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 LGALS3P17931 250 aaKnown RBP8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 FAM222AQ5U5X8 452 aa8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 CFC1BP0CG36 223 aa8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 CFC1P0CG37 223 aa8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 FAM104AQ969W3 186 aa8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 DNAJC30Q96LL9 226 aa8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 AMELXQ99217 191 aa8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 OVOL2Q9BRP0 275 aa8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 CHCHD7Q9BUK0 85 aa8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 ERG28Q9UKR5 140 aa8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 CELA1Q9UNI1 258 aa8.97□□□□□ -0.97
CDK5RAP3-217ENST00000580287 TRAV8-3A0A0A6YYJ7 113 aa8.96□□□□□ -0.97
CDK5RAP3-217ENST00000580287 J3QQQ9 107 aa8.96□□□□□ -0.97
CDK5RAP3-217ENST00000580287 IGHV3-30P01768 117 aa8.96□□□□□ -0.97
CDK5RAP3-217ENST00000580287 IGHV3-30-5P0DP03 117 aa8.96□□□□□ -0.97
CDK5RAP3-217ENST00000580287 ANKRD29Q8N6D5 301 aa8.96□□□□□ -0.97
CDK5RAP3-217ENST00000580287 Q8NAQ8 132 aa8.96□□□□□ -0.97
CDK5RAP3-217ENST00000580287 TRBV20-1A0A075B6N2 111 aa8.96□□□□□ -0.98
CDK5RAP3-217ENST00000580287 GAGE12JA6NER3 117 aa8.95□□□□□ -0.98
CDK5RAP3-217ENST00000580287 ZNF22P17026 224 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-217ENST00000580287 GAGE4Q13068 117 aa8.95□□□□□ -0.98
CDK5RAP3-217ENST00000580287 GAGE5Q13069 117 aa8.95□□□□□ -0.98
CDK5RAP3-217ENST00000580287 H7C2G1 150 aa8.95□□□□□ -0.98
CDK5RAP3-217ENST00000580287 K7EQD1 137 aa8.95□□□□□ -0.98
CDK5RAP3-217ENST00000580287 RPL36AP83881 106 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-217ENST00000580287 C10orf126Q8N4M7 172 aa8.95□□□□□ -0.98
CDK5RAP3-217ENST00000580287 RPL36ALQ969Q0 106 aaKnown RBP8.95□□□□□ -0.98
CDK5RAP3-217ENST00000580287 UBE2D4Q9Y2X8 147 aa8.95□□□□□ -0.98
CDK5RAP3-217ENST00000580287 PYGO1Q9Y3Y4 419 aa8.95□□□□□ -0.98
CDK5RAP3-217ENST00000580287 LOC100131303A0A0U1RQF7 123 aa8.94□□□□□ -0.98
CDK5RAP3-217ENST00000580287 SLC25A29Q8N8R3 303 aa8.94□□□□□ -0.98
CDK5RAP3-217ENST00000580287 TRAV4A0A0B4J268 109 aa8.94□□□□□ -0.98
CDK5RAP3-217ENST00000580287 TMEM223A0PJW6 202 aa8.94□□□□□ -0.98
CDK5RAP3-217ENST00000580287 SMIM9A6NGZ8 99 aa8.93□□□□□ -0.98
CDK5RAP3-217ENST00000580287 SPANXA1Q9NS26 97 aa8.93□□□□□ -0.98
CDK5RAP3-217ENST00000580287 EIF4EBP3O60516 100 aaPredicted RBP8.93□□□□□ -0.98
CDK5RAP3-217ENST00000580287 SCGB1C2P0DMR2 95 aa8.93□□□□□ -0.98
CDK5RAP3-217ENST00000580287 SMIM20Q8N5G0 67 aa8.93□□□□□ -0.98
CDK5RAP3-217ENST00000580287 PRO1854Q9UHT4 67 aa8.93□□□□□ -0.98
CDK5RAP3-217ENST00000580287 NPC2P61916 151 aa8.92□□□□□ -0.98
CDK5RAP3-217ENST00000580287 ANAPC13Q9BS18 74 aa8.92□□□□□ -0.98
CDK5RAP3-217ENST00000580287 COL7A1Q02388 2944 aa8.92□□□□□ -0.98
CDK5RAP3-217ENST00000580287 TRGV4A0A0C4DH28 118 aa8.92□□□□□ -0.98
CDK5RAP3-217ENST00000580287 LEPROTO15243 131 aa8.92□□□□□ -0.98
CDK5RAP3-217ENST00000580287 SS18L2Q9UHA2 77 aa8.92□□□□□ -0.98
CDK5RAP3-217ENST00000580287 MIFP14174 115 aa8.91□□□□□ -0.98
CDK5RAP3-217ENST00000580287 TIMM21Q9BVV7 248 aa8.91□□□□□ -0.98
CDK5RAP3-217ENST00000580287 SLC25A20O43772 301 aa8.91□□□□□ -0.98
CDK5RAP3-217ENST00000580287 FHL2Q14192 279 aa8.91□□□□□ -0.98
CDK5RAP3-217ENST00000580287 ZFAND6Q6FIF0 208 aa8.91□□□□□ -0.98
CDK5RAP3-217ENST00000580287 MRPS36P82909 103 aaKnown RBP8.9□□□□□ -0.98
CDK5RAP3-217ENST00000580287 TRBV10-1A0A0K0K1A3 114 aa8.9□□□□□ -0.98
CDK5RAP3-217ENST00000580287 C9JAW5 83 aa8.9□□□□□ -0.98
CDK5RAP3-217ENST00000580287 TMEM262E9PQX1 116 aa8.9□□□□□ -0.98
CDK5RAP3-217ENST00000580287 LINC00694P0DN24 101 aa8.9□□□□□ -0.98
CDK5RAP3-217ENST00000580287 HTN3P15516 51 aa8.9□□□□□ -0.98
CDK5RAP3-217ENST00000580287 C6orf226Q5I0X4 101 aa8.9□□□□□ -0.98
CDK5RAP3-217ENST00000580287 KPRPQ5T749 579 aaPredicted RBP8.9□□□□□ -0.98
CDK5RAP3-217ENST00000580287 MEGF8Q7Z7M0 2845 aa8.9□□□□□ -0.99
CDK5RAP3-217ENST00000580287 IGHV3-30-3P0DP02 117 aa8.89□□□□□ -0.99
CDK5RAP3-217ENST00000580287 LINC00612Q8N6U2 182 aa8.89□□□□□ -0.99
CDK5RAP3-217ENST00000580287 IGHV3-33P01772 117 aa8.88□□□□□ -0.99
CDK5RAP3-217ENST00000580287 DAD1P61803 113 aa8.88□□□□□ -0.99
CDK5RAP3-217ENST00000580287 NTM-AS1Q6ZSK4 140 aa8.88□□□□□ -0.99
CDK5RAP3-217ENST00000580287 DAZ4Q86SG3 579 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-217ENST00000580287 MUSTN1Q8IVN3 82 aa8.88□□□□□ -0.99
CDK5RAP3-217ENST00000580287 DAND5Q8N907 189 aa8.88□□□□□ -0.99
CDK5RAP3-217ENST00000580287 DAZ3Q9NR90 486 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-217ENST00000580287 A0A096LPF7 62 aa8.88□□□□□ -0.99
CDK5RAP3-217ENST00000580287 A0A0J9YWU9 116 aa8.88□□□□□ -0.99
CDK5RAP3-217ENST00000580287 PRSS2P07478 247 aa8.88□□□□□ -0.99
CDK5RAP3-217ENST00000580287 TRAV13-1A0A0B4J241 112 aa8.87□□□□□ -0.99
CDK5RAP3-217ENST00000580287 TINCRA0A1B0GVN0 87 aa8.87□□□□□ -0.99
CDK5RAP3-217ENST00000580287 LYRM9A8MSI8 78 aa8.87□□□□□ -0.99
CDK5RAP3-217ENST00000580287 UBE2L6O14933 153 aa8.87□□□□□ -0.99
CDK5RAP3-217ENST00000580287 HUWE1Q7Z6Z7 4374 aaKnown RBP8.87□□□□□ -0.99
CDK5RAP3-217ENST00000580287 STAB2Q8WWQ8 2551 aa8.87□□□□□ -0.99
CDK5RAP3-217ENST00000580287 F5H768 121 aa8.87□□□□□ -0.99
CDK5RAP3-217ENST00000580287 NHLRC4P0CG21 123 aaPredicted RBP8.87□□□□□ -0.99
CDK5RAP3-217ENST00000580287 SPART-AS1P0CW21 52 aa8.87□□□□□ -0.99
CDK5RAP3-217ENST00000580287 ADAMTSL4-AS1Q5T5F5 129 aa8.87□□□□□ -0.99
CDK5RAP3-217ENST00000580287 GAGE6Q13070 117 aa8.86□□□□□ -0.99
CDK5RAP3-217ENST00000580287 CDKN2A-AS1Q9UH64 79 aa8.86□□□□□ -0.99
CDK5RAP3-217ENST00000580287 A0A0J9YXY3 114 aa8.86□□□□□ -0.99
CDK5RAP3-217ENST00000580287 IGHV1-58A0A0C4DH39 117 aa8.85□□□□□ -0.99
CDK5RAP3-217ENST00000580287 NTN5Q8WTR8 489 aaPredicted RBP8.85□□□□□ -0.99
CDK5RAP3-217ENST00000580287 A0A0B4J2C4 111 aa8.85□□□□□ -0.99
CDK5RAP3-217ENST00000580287 ZNF625Q96I27 306 aaPredicted RBP8.85□□□□□ -0.99
CDK5RAP3-217ENST00000580287 NDUFA12Q9UI09 145 aa8.85□□□□□ -0.99
CDK5RAP3-217ENST00000580287 TRBV6-4A0A1B0GX49 114 aa8.84□□□□□ -0.99
CDK5RAP3-217ENST00000580287 B5MCH6 92 aa8.84□□□□□ -0.99
CDK5RAP3-217ENST00000580287 TMEM243Q9BU79 118 aa8.84□□□□□ -0.99
CDK5RAP3-217ENST00000580287 IGKV3OR2-268A0A0C4DH90 116 aa8.84□□□□□ -0.99
CDK5RAP3-217ENST00000580287 GYPEP15421 78 aa8.84□□□□□ -0.99
CDK5RAP3-217ENST00000580287 COX6A2Q02221 97 aa8.84□□□□□ -0.99
CDK5RAP3-217ENST00000580287 LINC01620Q4KN68 170 aa8.84□□□□□ -0.99
CDK5RAP3-217ENST00000580287 VSIG2Q96IQ7 327 aa8.84□□□□□ -0.99
CDK5RAP3-217ENST00000580287 V9GYY9 64 aa8.84□□□□□ -0.99
CDK5RAP3-217ENST00000580287 SNCGO76070 127 aa8.84□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms