RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-209ENST00000580158 NIT2Q9NQR4 276 aa3.3□□□□□ -1.88
KPNB1-209ENST00000580158 MRPL35Q9NZE8 188 aaKnown RBP3.3□□□□□ -1.88
KPNB1-209ENST00000580158 V9GYH0 126 aa3.3□□□□□ -1.88
KPNB1-209ENST00000580158 TEX46H3BTG2 121 aa3.29□□□□□ -1.88
KPNB1-209ENST00000580158 SPAG11BQ08648 103 aa3.29□□□□□ -1.88
KPNB1-209ENST00000580158 PYDC2Q56P42 97 aa3.29□□□□□ -1.88
KPNB1-209ENST00000580158 PCOTHQ58A44 107 aa3.29□□□□□ -1.88
KPNB1-209ENST00000580158 USH2AO75445 5202 aa3.29□□□□□ -1.88
KPNB1-209ENST00000580158 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.28□□□□□ -1.88
KPNB1-209ENST00000580158 MUC21A0A140T8X8 626 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 IGKV2-29A2NJV5 120 aaPredicted RBP3.28□□□□□ -1.88
KPNB1-209ENST00000580158 C1orf196B1AJZ1 125 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 G3V3Q6 166 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 NDUFA1O15239 70 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 HMGB3O15347 200 aaKnown RBP3.28□□□□□ -1.88
KPNB1-209ENST00000580158 BCE1O60756 84 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 ATP5LO75964 103 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 BTCP35070 178 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 DEFA3P59666 94 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 KRTAP7-1Q8IUC3 87 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 SCGB1C1Q8TD33 95 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 SMDT1Q9H4I9 107 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 ZFP30Q9Y2G7 519 aa3.28□□□□□ -1.88
KPNB1-209ENST00000580158 SNAI2O43623 268 aa3.27□□□□□ -1.89
KPNB1-209ENST00000580158 NCR2O95944 276 aa3.27□□□□□ -1.89
KPNB1-209ENST00000580158 APCSP02743 223 aa3.27□□□□□ -1.89
KPNB1-209ENST00000580158 OR5AL1P0C617 328 aa3.27□□□□□ -1.89
KPNB1-209ENST00000580158 ARL14EPLP0DKL9 152 aa3.27□□□□□ -1.89
KPNB1-209ENST00000580158 Q86TA4 180 aa3.27□□□□□ -1.89
KPNB1-209ENST00000580158 FAM19A2Q8N3H0 131 aa3.27□□□□□ -1.89
KPNB1-209ENST00000580158 C11orf52Q96A22 123 aa3.27□□□□□ -1.89
KPNB1-209ENST00000580158 ALG5Q9Y673 324 aa3.27□□□□□ -1.89
KPNB1-209ENST00000580158 CXCL1P09341 107 aa3.26□□□□□ -1.89
KPNB1-209ENST00000580158 NTF3P20783 257 aa3.26□□□□□ -1.89
KPNB1-209ENST00000580158 UBE2AP49459 152 aa3.26□□□□□ -1.89
KPNB1-209ENST00000580158 UBE2G1P62253 170 aa3.26□□□□□ -1.89
KPNB1-209ENST00000580158 C5orf38Q86SI9 138 aa3.26□□□□□ -1.89
KPNB1-209ENST00000580158 OR10D4PQ8NGN7 298 aa3.26□□□□□ -1.89
KPNB1-209ENST00000580158 CYTL1Q9NRR1 136 aa3.26□□□□□ -1.89
KPNB1-209ENST00000580158 TMEM167BQ9NRX6 74 aa3.26□□□□□ -1.89
KPNB1-209ENST00000580158 C22orf24Q9Y442 160 aa3.26□□□□□ -1.89
KPNB1-209ENST00000580158 SPINK1P00995 79 aa3.25□□□□□ -1.89
KPNB1-209ENST00000580158 STAG3L2P0CL84 134 aa3.25□□□□□ -1.89
KPNB1-209ENST00000580158 GCHFRP30047 84 aa3.25□□□□□ -1.89
KPNB1-209ENST00000580158 CTRLP40313 264 aa3.25□□□□□ -1.89
KPNB1-209ENST00000580158 CDC34P49427 236 aaPredicted RBP3.25□□□□□ -1.89
KPNB1-209ENST00000580158 FLGP20930 4061 aaPredicted RBP3.24□□□□□ -1.89
KPNB1-209ENST00000580158 A0A1W2PRE2 83 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 IFITM10A6NMD0 228 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 CENPXA8MT69 81 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 PEX7O00628 323 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 C9orf129Q5T035 196 aaKnown RBP3.24□□□□□ -1.89
KPNB1-209ENST00000580158 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 UNQ6190/PRO20217Q6UXQ8 127 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 SMIM29Q86T20 159 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 MTURNQ8N3F0 131 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 C3orf22Q8N5N4 141 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 ORAOV1Q8WV07 137 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 HIST1H2BAQ96A08 127 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 FMC1Q96HJ9 113 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 PACRGQ96M98 296 aaPredicted RBP3.24□□□□□ -1.89
KPNB1-209ENST00000580158 CDC42SE2Q9NRR3 84 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 C6orf48Q9UBA6 75 aa3.24□□□□□ -1.89
KPNB1-209ENST00000580158 NDUFC2-KCTD14E9PQ53 114 aa3.23□□□□□ -1.89
KPNB1-209ENST00000580158 PLA2G10O15496 165 aa3.23□□□□□ -1.89
KPNB1-209ENST00000580158 CXorf1O96002 111 aa3.23□□□□□ -1.89
KPNB1-209ENST00000580158 MBP02144 154 aa3.23□□□□□ -1.89
KPNB1-209ENST00000580158 TRGC1P0CF51 173 aa3.23□□□□□ -1.89
KPNB1-209ENST00000580158 MRPL55Q7Z7F7 128 aaKnown RBP3.23□□□□□ -1.89
KPNB1-209ENST00000580158 NKX6-2Q9C056 277 aaPredicted RBP3.23□□□□□ -1.89
KPNB1-209ENST00000580158 PYGO1Q9Y3Y4 419 aa3.23□□□□□ -1.89
KPNB1-209ENST00000580158 TRBV30A0A0K0K1B3 111 aa3.22□□□□□ -1.89
KPNB1-209ENST00000580158 PMCHP20382 165 aa3.22□□□□□ -1.89
KPNB1-209ENST00000580158 S100A5P33763 92 aa3.22□□□□□ -1.89
KPNB1-209ENST00000580158 NDUFV3P56181 108 aaKnown RBP3.22□□□□□ -1.89
KPNB1-209ENST00000580158 ADAMTSL4-AS1Q5T5F5 129 aa3.22□□□□□ -1.89
KPNB1-209ENST00000580158 MRAP2Q96G30 205 aa3.22□□□□□ -1.89
KPNB1-209ENST00000580158 SEC22CQ9BRL7 303 aa3.22□□□□□ -1.89
KPNB1-209ENST00000580158 MARVELD1Q9BSK0 173 aa3.22□□□□□ -1.89
KPNB1-209ENST00000580158 TP73-AS1Q9UF72 201 aa3.22□□□□□ -1.89
KPNB1-209ENST00000580158 TRAV13-1A0A0B4J241 112 aa3.21□□□□□ -1.9
KPNB1-209ENST00000580158 I3L3M4 83 aa3.21□□□□□ -1.9
KPNB1-209ENST00000580158 LTAP01374 205 aa3.21□□□□□ -1.9
KPNB1-209ENST00000580158 SMAGPQ0VAQ4 97 aa3.21□□□□□ -1.9
KPNB1-209ENST00000580158 LYZL1Q6UWQ5 148 aa3.21□□□□□ -1.9
KPNB1-209ENST00000580158 MRPL52Q86TS9 123 aaKnown RBP3.21□□□□□ -1.9
KPNB1-209ENST00000580158 HSPB11Q9Y547 144 aa3.21□□□□□ -1.9
KPNB1-209ENST00000580158 SDHAF1A6NFY7 115 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 RPL37AP8A6NKH3 93 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 SLC25A20O43772 301 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 IL7P13232 177 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 UBE2G2P60604 165 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 KRTAP19-6Q3LI70 58 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 TRIQKQ629K1 86 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 Q6Q795 121 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 KRTAP13-1Q8IUC0 172 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 Q8NBF4 154 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 FAM210AQ96ND0 272 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 SMIM3Q9BZL3 60 aa3.2□□□□□ -1.9
KPNB1-209ENST00000580158 ZNF727A8MUV8 499 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms