RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 H3BS24 57 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 DPM2O94777 84 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 IGHV3-30P01768 117 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 IGHV3-33P01772 117 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 IGHV3-30-3P0DP02 117 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 IGHV3-30-5P0DP03 117 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 TIRAPP58753 221 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 S100A12P80511 92 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 ZNF664Q8N3J9 261 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 CDC42SE2Q9NRR3 84 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 APLNQ9ULZ1 77 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 LINC00588Q9Y4M8 146 aa6.85□□□□□ -1.31
CRLF3-202ENST00000577725 TRAV13-1A0A0B4J241 112 aa6.84□□□□□ -1.31
CRLF3-202ENST00000577725 F8VRH5 84 aa6.84□□□□□ -1.31
CRLF3-202ENST00000577725 IGKCP01834 107 aa6.84□□□□□ -1.31
CRLF3-202ENST00000577725 ZNF25P17030 456 aaPredicted RBP6.84□□□□□ -1.31
CRLF3-202ENST00000577725 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
CRLF3-202ENST00000577725 PAM16Q9Y3D7 125 aa6.84□□□□□ -1.31
CRLF3-202ENST00000577725 ANGP03950 147 aaKnown RBP6.83□□□□□ -1.32
CRLF3-202ENST00000577725 UBE2D1P51668 147 aa6.83□□□□□ -1.32
CRLF3-202ENST00000577725 PAPPA-AS1Q5QFB9 102 aa6.83□□□□□ -1.32
CRLF3-202ENST00000577725 STPG4Q8N801 248 aa6.83□□□□□ -1.32
CRLF3-202ENST00000577725 C2orf88Q9BSF0 95 aa6.83□□□□□ -1.32
CRLF3-202ENST00000577725 CHAC1Q9BUX1 264 aa6.83□□□□□ -1.32
CRLF3-202ENST00000577725 VAMP8Q9BV40 100 aa6.83□□□□□ -1.32
CRLF3-202ENST00000577725 PRO1933Q9H354 126 aa6.83□□□□□ -1.32
CRLF3-202ENST00000577725 CSDC2Q9Y534 153 aaKnown RBP6.83□□□□□ -1.32
CRLF3-202ENST00000577725 DNAH17Q9UFH2 4485 aa6.83□□□□□ -1.32
CRLF3-202ENST00000577725 DNAH6Q9C0G6 4158 aa6.83□□□□□ -1.32
CRLF3-202ENST00000577725 TRAV9-2A0A087WT02 112 aa6.82□□□□□ -1.32
CRLF3-202ENST00000577725 NPSP0C0P6 89 aa6.82□□□□□ -1.32
CRLF3-202ENST00000577725 IGLC3P0DOY3 106 aa6.82□□□□□ -1.32
CRLF3-202ENST00000577725 COX6A2Q02221 97 aa6.82□□□□□ -1.32
CRLF3-202ENST00000577725 SPATA45Q537H7 98 aa6.82□□□□□ -1.32
CRLF3-202ENST00000577725 LINC00269Q8N2A0 174 aa6.82□□□□□ -1.32
CRLF3-202ENST00000577725 MRPS16Q9Y3D3 137 aaKnown RBP6.82□□□□□ -1.32
CRLF3-202ENST00000577725 A0A1B0GUV1 79 aa6.81□□□□□ -1.32
CRLF3-202ENST00000577725 RTL8CO15255 209 aa6.81□□□□□ -1.32
CRLF3-202ENST00000577725 ZNF22P17026 224 aaPredicted RBP6.81□□□□□ -1.32
CRLF3-202ENST00000577725 PLNP26678 52 aa6.81□□□□□ -1.32
CRLF3-202ENST00000577725 TMEM170BQ5T4T1 132 aa6.81□□□□□ -1.32
CRLF3-202ENST00000577725 C1orf43Q9BWL3 253 aa6.81□□□□□ -1.32
CRLF3-202ENST00000577725 KLK12Q9UKR0 248 aa6.81□□□□□ -1.32
CRLF3-202ENST00000577725 APOBP04114 4563 aaKnown RBP6.81□□□□□ -1.32
CRLF3-202ENST00000577725 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
CRLF3-202ENST00000577725 CCL18P55774 89 aa6.8□□□□□ -1.32
CRLF3-202ENST00000577725 PKIAP61925 76 aa6.8□□□□□ -1.32
CRLF3-202ENST00000577725 NFE4Q86UQ8 179 aa6.8□□□□□ -1.32
CRLF3-202ENST00000577725 UBE2DNLQ8IWF7 75 aa6.8□□□□□ -1.32
CRLF3-202ENST00000577725 TP73-AS1Q9UF72 201 aa6.8□□□□□ -1.32
CRLF3-202ENST00000577725 IGLV10-54A0A075B6I4 117 aa6.79□□□□□ -1.32
CRLF3-202ENST00000577725 IGHV3-64A0A075B6Q5 118 aa6.79□□□□□ -1.32
CRLF3-202ENST00000577725 LINC00959A0A1B0GUT2 108 aa6.79□□□□□ -1.32
CRLF3-202ENST00000577725 TINCRA0A1B0GVN0 87 aa6.79□□□□□ -1.32
CRLF3-202ENST00000577725 HSBP1L1C9JCN9 74 aa6.79□□□□□ -1.32
CRLF3-202ENST00000577725 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
CRLF3-202ENST00000577725 LINC00242Q5T6M2 205 aa6.79□□□□□ -1.32
CRLF3-202ENST00000577725 LINC00469Q8N7U9 141 aa6.79□□□□□ -1.32
CRLF3-202ENST00000577725 GEMIN7Q9H840 131 aaKnown RBP6.79□□□□□ -1.32
CRLF3-202ENST00000577725 IGKV2D-26A0A0A0MRZ7 120 aa6.78□□□□□ -1.32
CRLF3-202ENST00000577725 SPINK8P0C7L1 97 aa6.78□□□□□ -1.32
CRLF3-202ENST00000577725 REG3AQ06141 175 aa6.78□□□□□ -1.32
CRLF3-202ENST00000577725 LINC01556Q5JQF7 62 aa6.78□□□□□ -1.32
CRLF3-202ENST00000577725 UBE2WQ96B02 151 aa6.78□□□□□ -1.32
CRLF3-202ENST00000577725 TTTY13Q9BZ97 58 aa6.78□□□□□ -1.32
CRLF3-202ENST00000577725 TMEM223A0PJW6 202 aa6.77□□□□□ -1.33
CRLF3-202ENST00000577725 C16orf90A8MZG2 172 aa6.77□□□□□ -1.33
CRLF3-202ENST00000577725 TSTD3H0UI37 97 aa6.77□□□□□ -1.33
CRLF3-202ENST00000577725 SIVA1O15304 175 aa6.77□□□□□ -1.33
CRLF3-202ENST00000577725 CCL25O15444 150 aa6.77□□□□□ -1.33
CRLF3-202ENST00000577725 XCL1P47992 114 aa6.77□□□□□ -1.33
CRLF3-202ENST00000577725 NMUP48645 174 aa6.77□□□□□ -1.33
CRLF3-202ENST00000577725 SS18Q15532 418 aa6.77□□□□□ -1.33
CRLF3-202ENST00000577725 ENHOQ6UWT2 76 aa6.77□□□□□ -1.33
CRLF3-202ENST00000577725 C14orf144Q96I85 54 aa6.77□□□□□ -1.33
CRLF3-202ENST00000577725 CDKN2A-AS1Q9UH64 79 aa6.77□□□□□ -1.33
CRLF3-202ENST00000577725 MYCBP2O75592 4640 aa6.76□□□□□ -1.33
CRLF3-202ENST00000577725 TRAV8-3A0A0A6YYJ7 113 aa6.76□□□□□ -1.33
CRLF3-202ENST00000577725 PCP4L1A6NKN8 68 aa6.76□□□□□ -1.33
CRLF3-202ENST00000577725 CRPP02741 224 aa6.76□□□□□ -1.33
CRLF3-202ENST00000577725 DNAH10OSP0CZ25 163 aa6.76□□□□□ -1.33
CRLF3-202ENST00000577725 TSPEAR-AS2P59090 65 aa6.76□□□□□ -1.33
CRLF3-202ENST00000577725 FAM19A3Q7Z5A8 133 aa6.76□□□□□ -1.33
CRLF3-202ENST00000577725 C5orf38Q86SI9 138 aa6.76□□□□□ -1.33
CRLF3-202ENST00000577725 CHCHD10Q8WYQ3 142 aaPredicted RBP6.76□□□□□ -1.33
CRLF3-202ENST00000577725 UPK3BQ9BT76 320 aa6.76□□□□□ -1.33
CRLF3-202ENST00000577725 IGLV5-45A0A087WSX0 123 aa6.75□□□□□ -1.33
CRLF3-202ENST00000577725 GAGE12HA6NDE8 117 aa6.75□□□□□ -1.33
CRLF3-202ENST00000577725 EPM2AB3EWF7 344 aa6.75□□□□□ -1.33
CRLF3-202ENST00000577725 HERVK_113P61574 105 aa6.75□□□□□ -1.33
CRLF3-202ENST00000577725 HERVK_113P63121 156 aa6.75□□□□□ -1.33
CRLF3-202ENST00000577725 PCP2Q8IVA1 136 aa6.75□□□□□ -1.33
CRLF3-202ENST00000577725 Q9H8V8 135 aa6.75□□□□□ -1.33
CRLF3-202ENST00000577725 Q9HAA7 133 aa6.75□□□□□ -1.33
CRLF3-202ENST00000577725 PRR34Q9NV39 138 aa6.75□□□□□ -1.33
CRLF3-202ENST00000577725 LRP1BQ9NZR2 4599 aa6.74□□□□□ -1.33
CRLF3-202ENST00000577725 E9PLD3 99 aa6.74□□□□□ -1.33
CRLF3-202ENST00000577725 SEC11AP67812 179 aa6.74□□□□□ -1.33
CRLF3-202ENST00000577725 SMIM1B2RUZ4 78 aa6.73□□□□□ -1.33
CRLF3-202ENST00000577725 H3BRM9 83 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms