RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 LOC100131303A0A0U1RQF7 123 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 F8W1H4 67 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 H3BNG1 76 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 K7EP13 123 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 K7ERU9 68 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 APOMO95445 188 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 GAGE6Q13070 117 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 MIAQ16674 131 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 KRTAP24-1Q3LI83 254 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 Q8NAQ8 132 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 PGPEP1Q9NXJ5 209 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 ICOSQ9Y6W8 199 aa4.78□□□□□ -1.64
SMG6-217ENST00000575338 SMIM1B2RUZ4 78 aa4.77□□□□□ -1.65
SMG6-217ENST00000575338 TMEM262E9PQX1 116 aa4.77□□□□□ -1.65
SMG6-217ENST00000575338 J3QR89 54 aa4.77□□□□□ -1.65
SMG6-217ENST00000575338 K7ERJ3 54 aa4.77□□□□□ -1.65
SMG6-217ENST00000575338 PRSS2P07478 247 aa4.77□□□□□ -1.65
SMG6-217ENST00000575338 COX6CP09669 75 aa4.77□□□□□ -1.65
SMG6-217ENST00000575338 MEIG1Q5JSS6 88 aa4.77□□□□□ -1.65
SMG6-217ENST00000575338 PRIMA1Q86XR5 153 aa4.77□□□□□ -1.65
SMG6-217ENST00000575338 ERG28Q9UKR5 140 aa4.77□□□□□ -1.65
SMG6-217ENST00000575338 A0A087WZ39 114 aa4.76□□□□□ -1.65
SMG6-217ENST00000575338 A4D1N5 150 aa4.76□□□□□ -1.65
SMG6-217ENST00000575338 F5H768 121 aa4.76□□□□□ -1.65
SMG6-217ENST00000575338 Q1RN00 199 aa4.76□□□□□ -1.65
SMG6-217ENST00000575338 MUSTN1Q8IVN3 82 aa4.76□□□□□ -1.65
SMG6-217ENST00000575338 C11orf68Q9H3H3 251 aaKnown RBP4.76□□□□□ -1.65
SMG6-217ENST00000575338 Q9H8V8 135 aa4.76□□□□□ -1.65
SMG6-217ENST00000575338 LOC107984156A0A0G2JMH3 177 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 LINC00959A0A1B0GUT2 108 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 TSPAN13O95857 204 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 CFC1BP0CG36 223 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 CFC1P0CG37 223 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 SCGB1C2P0DMR2 95 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 CXCL5P42830 114 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 PSMB2P49721 201 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 COX6A2Q02221 97 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 LELP1Q5T871 98 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 ARL17AQ8IVW1 177 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 COX7B2Q8TF08 81 aa4.75□□□□□ -1.65
SMG6-217ENST00000575338 NOTCH3Q9UM47 2321 aa4.74□□□□□ -1.65
SMG6-217ENST00000575338 JMJD1CQ15652 2540 aa4.74□□□□□ -1.65
SMG6-217ENST00000575338 IGLV4-60A0A075B6I1 120 aa4.74□□□□□ -1.65
SMG6-217ENST00000575338 IGHV3OR16-9A0A0B4J2B5 98 aa4.74□□□□□ -1.65
SMG6-217ENST00000575338 RBX1P62877 108 aa4.74□□□□□ -1.65
SMG6-217ENST00000575338 OXLD1Q5BKU9 147 aa4.74□□□□□ -1.65
SMG6-217ENST00000575338 SPATA3Q8NHX4 192 aa4.74□□□□□ -1.65
SMG6-217ENST00000575338 MUC7Q8TAX7 377 aa4.74□□□□□ -1.65
SMG6-217ENST00000575338 LITAFQ99732 161 aa4.74□□□□□ -1.65
SMG6-217ENST00000575338 NAA38Q9BRA0 125 aaKnown RBP4.74□□□□□ -1.65
SMG6-217ENST00000575338 NIPBLQ6KC79 2804 aaeCLIP4.74□□□□□ -1.65
SMG6-217ENST00000575338 IGKV3OR2-268A0A0C4DH90 116 aa4.73□□□□□ -1.65
SMG6-217ENST00000575338 TRBV30A0A0K0K1B3 111 aa4.73□□□□□ -1.65
SMG6-217ENST00000575338 IBA57-AS1B1ANH7 110 aa4.73□□□□□ -1.65
SMG6-217ENST00000575338 IGHV3-33P01772 117 aa4.73□□□□□ -1.65
SMG6-217ENST00000575338 CD164L2Q6UWJ8 174 aa4.73□□□□□ -1.65
SMG6-217ENST00000575338 Q8IZM0 81 aa4.73□□□□□ -1.65
SMG6-217ENST00000575338 ZNF625Q96I27 306 aaPredicted RBP4.73□□□□□ -1.65
SMG6-217ENST00000575338 CBY1Q9Y3M2 126 aa4.73□□□□□ -1.65
SMG6-217ENST00000575338 TRAV13-2A0A0B4J235 113 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 TRAV8-4A0A0B4J246 113 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 M0QXV9 152 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 COX7A2LO14548 114 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 ANGP03950 147 aaKnown RBP4.72□□□□□ -1.65
SMG6-217ENST00000575338 HTN3P15516 51 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 ATXN8Q156A1 80 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 OCIAD2Q56VL3 154 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 C6orf226Q5I0X4 101 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 CFAP161Q6P656 301 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 LINC00308Q8TCZ7 52 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 SPATA25Q9BR10 227 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 TOMM7Q9P0U1 55 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 CELA1Q9UNI1 258 aa4.72□□□□□ -1.65
SMG6-217ENST00000575338 H3BMG7 143 aa4.71□□□□□ -1.66
SMG6-217ENST00000575338 DEFB4AO15263 64 aa4.71□□□□□ -1.66
SMG6-217ENST00000575338 CRPP02741 224 aa4.71□□□□□ -1.66
SMG6-217ENST00000575338 MALP21145 153 aa4.71□□□□□ -1.66
SMG6-217ENST00000575338 CKS1BP61024 79 aa4.71□□□□□ -1.66
SMG6-217ENST00000575338 REG3AQ06141 175 aa4.71□□□□□ -1.66
SMG6-217ENST00000575338 COX17Q14061 63 aa4.71□□□□□ -1.66
SMG6-217ENST00000575338 A0A096LPF7 62 aa4.7□□□□□ -1.66
SMG6-217ENST00000575338 XCL1P47992 114 aa4.7□□□□□ -1.66
SMG6-217ENST00000575338 KRTAP10-11P60412 298 aa4.7□□□□□ -1.66
SMG6-217ENST00000575338 ADAMTSL4-AS1Q5T5F5 129 aa4.7□□□□□ -1.66
SMG6-217ENST00000575338 LINC00269Q8N2A0 174 aa4.7□□□□□ -1.66
SMG6-217ENST00000575338 C11orf45Q8TAV5 145 aa4.7□□□□□ -1.66
SMG6-217ENST00000575338 ATRQ13535 2644 aa4.69□□□□□ -1.66
SMG6-217ENST00000575338 RPL13AP40429 203 aaKnown RBP4.69□□□□□ -1.66
SMG6-217ENST00000575338 LINC00158P58513 81 aa4.69□□□□□ -1.66
SMG6-217ENST00000575338 KPRPQ5T749 579 aaPredicted RBP4.69□□□□□ -1.66
SMG6-217ENST00000575338 LYPD5Q6UWN5 251 aa4.69□□□□□ -1.66
SMG6-217ENST00000575338 C5orf38Q86SI9 138 aa4.69□□□□□ -1.66
SMG6-217ENST00000575338 C15orf53Q8NAA6 179 aa4.69□□□□□ -1.66
SMG6-217ENST00000575338 CHCHD10Q8WYQ3 142 aaPredicted RBP4.69□□□□□ -1.66
SMG6-217ENST00000575338 TRAV10A0A0B4J240 114 aa4.68□□□□□ -1.66
SMG6-217ENST00000575338 H7C2G1 150 aa4.68□□□□□ -1.66
SMG6-217ENST00000575338 TCL1BO95988 128 aa4.68□□□□□ -1.66
SMG6-217ENST00000575338 NPC2P61916 151 aa4.68□□□□□ -1.66
SMG6-217ENST00000575338 VPS25Q9BRG1 176 aa4.68□□□□□ -1.66
SMG6-217ENST00000575338 SND1-IT1Q9HBX3 110 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms