RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 LINC00694P0DN24 101 aa6.17□□□□□ -1.42
RPAIN-215ENST00000575112 ODF3L2Q3SX64 289 aa6.17□□□□□ -1.42
RPAIN-215ENST00000575112 TRAV8-4A0A0B4J246 113 aa6.17□□□□□ -1.42
RPAIN-215ENST00000575112 POM121L12Q8N7R1 296 aa6.17□□□□□ -1.42
RPAIN-215ENST00000575112 LEPROTO15243 131 aa6.16□□□□□ -1.42
RPAIN-215ENST00000575112 IFITM1P13164 125 aa6.16□□□□□ -1.42
RPAIN-215ENST00000575112 F5H768 121 aa6.16□□□□□ -1.42
RPAIN-215ENST00000575112 DEFB135Q30KP9 77 aa6.16□□□□□ -1.42
RPAIN-215ENST00000575112 LINC00526Q96FQ7 95 aa6.16□□□□□ -1.42
RPAIN-215ENST00000575112 PDZD2O15018 2839 aa6.16□□□□□ -1.42
RPAIN-215ENST00000575112 BRI3O95415 125 aa6.16□□□□□ -1.42
RPAIN-215ENST00000575112 RPL32P62910 135 aaKnown RBP6.16□□□□□ -1.42
RPAIN-215ENST00000575112 LINC01006Q8NI28 216 aa6.16□□□□□ -1.42
RPAIN-215ENST00000575112 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.15□□□□□ -1.42
RPAIN-215ENST00000575112 Q8N2B8 174 aa6.15□□□□□ -1.42
RPAIN-215ENST00000575112 ICOSQ9Y6W8 199 aa6.15□□□□□ -1.42
RPAIN-215ENST00000575112 LGALS9O00182 355 aa6.15□□□□□ -1.42
RPAIN-215ENST00000575112 CRPP02741 224 aa6.15□□□□□ -1.42
RPAIN-215ENST00000575112 PIK3CD-AS1Q5SR53 167 aa6.15□□□□□ -1.42
RPAIN-215ENST00000575112 UBE2WQ96B02 151 aa6.15□□□□□ -1.42
RPAIN-215ENST00000575112 DPH3Q96FX2 82 aa6.15□□□□□ -1.42
RPAIN-215ENST00000575112 C9orf85Q96MD7 179 aa6.15□□□□□ -1.42
RPAIN-215ENST00000575112 VWFP04275 2813 aa6.15□□□□□ -1.43
RPAIN-215ENST00000575112 ATXN8Q156A1 80 aa6.15□□□□□ -1.43
RPAIN-215ENST00000575112 INAFM1C9JVW0 142 aa6.14□□□□□ -1.43
RPAIN-215ENST00000575112 J3QKU1 62 aa6.14□□□□□ -1.43
RPAIN-215ENST00000575112 GAGE2AQ6NT46 116 aa6.14□□□□□ -1.43
RPAIN-215ENST00000575112 SMCR5Q8TEV8 140 aa6.14□□□□□ -1.43
RPAIN-215ENST00000575112 A0A0B4J2C4 111 aa6.14□□□□□ -1.43
RPAIN-215ENST00000575112 TRBV10-2A0A0K0K1G8 114 aa6.14□□□□□ -1.43
RPAIN-215ENST00000575112 COX6A2Q02221 97 aa6.14□□□□□ -1.43
RPAIN-215ENST00000575112 C4orf3Q8WVX3 66 aa6.14□□□□□ -1.43
RPAIN-215ENST00000575112 KLK5Q9Y337 293 aaPredicted RBP6.14□□□□□ -1.43
RPAIN-215ENST00000575112 RHOHQ15669 191 aa6.13□□□□□ -1.43
RPAIN-215ENST00000575112 S100A7L2Q5SY68 101 aa6.13□□□□□ -1.43
RPAIN-215ENST00000575112 TMEM243Q9BU79 118 aa6.13□□□□□ -1.43
RPAIN-215ENST00000575112 TENM4Q6N022 2769 aa6.13□□□□□ -1.43
RPAIN-215ENST00000575112 TINCRA0A1B0GVN0 87 aa6.13□□□□□ -1.43
RPAIN-215ENST00000575112 C1orf158Q8N1D5 194 aa6.13□□□□□ -1.43
RPAIN-215ENST00000575112 ANGP03950 147 aaKnown RBP6.12□□□□□ -1.43
RPAIN-215ENST00000575112 GYPEP15421 78 aa6.12□□□□□ -1.43
RPAIN-215ENST00000575112 HIST1H4AP62805 103 aaKnown RBP6.12□□□□□ -1.43
RPAIN-215ENST00000575112 KLK9Q2XQG4 91 aa6.12□□□□□ -1.43
RPAIN-215ENST00000575112 DEFB121Q5J5C9 76 aa6.12□□□□□ -1.43
RPAIN-215ENST00000575112 TMEM89A2RUT3 159 aa6.12□□□□□ -1.43
RPAIN-215ENST00000575112 TRBV30A0A0K0K1B3 111 aa6.12□□□□□ -1.43
RPAIN-215ENST00000575112 Q9HAA7 133 aa6.12□□□□□ -1.43
RPAIN-215ENST00000575112 PPDPFQ9H3Y8 114 aa6.11□□□□□ -1.43
RPAIN-215ENST00000575112 MED14OSP0DP75 135 aa6.11□□□□□ -1.43
RPAIN-215ENST00000575112 TMEM86BQ8N661 226 aa6.11□□□□□ -1.43
RPAIN-215ENST00000575112 FBN1P35555 2871 aaKnown RBP6.11□□□□□ -1.43
RPAIN-215ENST00000575112 TRBV6-5A0A0K0K1A5 114 aa6.11□□□□□ -1.43
RPAIN-215ENST00000575112 PRB2P02812 416 aaPredicted RBP6.11□□□□□ -1.43
RPAIN-215ENST00000575112 ATP5G1P05496 136 aa6.11□□□□□ -1.43
RPAIN-215ENST00000575112 C9orf129Q5T035 196 aaKnown RBP6.11□□□□□ -1.43
RPAIN-215ENST00000575112 SOSTDC1Q6X4U4 206 aa6.11□□□□□ -1.43
RPAIN-215ENST00000575112 TENM1Q9UKZ4 2725 aa6.1□□□□□ -1.43
RPAIN-215ENST00000575112 BAHCC1Q9P281 2608 aa6.1□□□□□ -1.43
RPAIN-215ENST00000575112 FAM236AA0A1B0GUQ0 79 aa6.1□□□□□ -1.43
RPAIN-215ENST00000575112 FAM236BA0A1B0GV22 79 aa6.1□□□□□ -1.43
RPAIN-215ENST00000575112 K7EQD1 137 aa6.1□□□□□ -1.43
RPAIN-215ENST00000575112 LOC107984640A0A0U1RRK4 108 aa6.1□□□□□ -1.43
RPAIN-215ENST00000575112 VSIG2Q96IQ7 327 aa6.1□□□□□ -1.43
RPAIN-215ENST00000575112 COPS9Q8WXC6 57 aa6.1□□□□□ -1.43
RPAIN-215ENST00000575112 FAM218AQ96MZ4 157 aa6.1□□□□□ -1.43
RPAIN-215ENST00000575112 FAM110AQ9BQ89 295 aa6.1□□□□□ -1.43
RPAIN-215ENST00000575112 IGHV1-58A0A0C4DH39 117 aa6.09□□□□□ -1.43
RPAIN-215ENST00000575112 DAD1P61803 113 aa6.09□□□□□ -1.43
RPAIN-215ENST00000575112 CYSTM1Q9H1C7 97 aa6.09□□□□□ -1.43
RPAIN-215ENST00000575112 LAMTOR3Q9UHA4 124 aa6.09□□□□□ -1.43
RPAIN-215ENST00000575112 MRPS36P82909 103 aaKnown RBP6.09□□□□□ -1.43
RPAIN-215ENST00000575112 MIAQ16674 131 aa6.09□□□□□ -1.43
RPAIN-215ENST00000575112 CHCHD7Q9BUK0 85 aa6.09□□□□□ -1.43
RPAIN-215ENST00000575112 LST1O00453 97 aa6.09□□□□□ -1.44
RPAIN-215ENST00000575112 MRAPQ8TCY5 172 aa6.09□□□□□ -1.44
RPAIN-215ENST00000575112 UBE2D4Q9Y2X8 147 aa6.09□□□□□ -1.44
RPAIN-215ENST00000575112 OTOGQ6ZRI0 2925 aa6.08□□□□□ -1.44
RPAIN-215ENST00000575112 MRPL23Q16540 153 aaKnown RBP6.08□□□□□ -1.44
RPAIN-215ENST00000575112 C22orf24Q9Y442 160 aa6.08□□□□□ -1.44
RPAIN-215ENST00000575112 MIR7-3HGQ8N6C7 128 aa6.08□□□□□ -1.44
RPAIN-215ENST00000575112 Q8N3U1 123 aa6.08□□□□□ -1.44
RPAIN-215ENST00000575112 IGLV4-60A0A075B6I1 120 aa6.07□□□□□ -1.44
RPAIN-215ENST00000575112 SLPIP03973 132 aa6.07□□□□□ -1.44
RPAIN-215ENST00000575112 PRR3P79522 188 aaKnown RBP6.07□□□□□ -1.44
RPAIN-215ENST00000575112 SS18Q15532 418 aa6.07□□□□□ -1.44
RPAIN-215ENST00000575112 LY6G6DO95868 133 aa6.07□□□□□ -1.44
RPAIN-215ENST00000575112 FAM222AQ5U5X8 452 aa6.07□□□□□ -1.44
RPAIN-215ENST00000575112 SPATA3Q8NHX4 192 aa6.06□□□□□ -1.44
RPAIN-215ENST00000575112 SPANXA1Q9NS26 97 aa6.06□□□□□ -1.44
RPAIN-215ENST00000575112 A0A096LNT2 108 aa6.06□□□□□ -1.44
RPAIN-215ENST00000575112 DAZ2Q13117 558 aaKnown RBP6.06□□□□□ -1.44
RPAIN-215ENST00000575112 DAZ4Q86SG3 579 aaKnown RBP6.06□□□□□ -1.44
RPAIN-215ENST00000575112 EDA2RQ9HAV5 297 aa6.06□□□□□ -1.44
RPAIN-215ENST00000575112 DAZ3Q9NR90 486 aaKnown RBP6.06□□□□□ -1.44
RPAIN-215ENST00000575112 HERVK_113P63121 156 aa6.06□□□□□ -1.44
RPAIN-215ENST00000575112 LINC00242Q5T6M2 205 aa6.06□□□□□ -1.44
RPAIN-215ENST00000575112 NTM-AS1Q6ZSK4 140 aa6.06□□□□□ -1.44
RPAIN-215ENST00000575112 LINC00308Q8TCZ7 52 aa6.05□□□□□ -1.44
RPAIN-215ENST00000575112 C9orf116Q5BN46 136 aaPredicted RBP6.05□□□□□ -1.44
RPAIN-215ENST00000575112 LINC00269Q8N2A0 174 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms